RNA–Protein interactions for RNA: ENST00000529802.1

FOXRED1-209, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-209ENST00000529802 ARHGEF12Q9NZN5 1544 aa23.12■■□□□ 1.29
FOXRED1-209ENST00000529802 MLECQ14165 292 aa23.11■■□□□ 1.29
FOXRED1-209ENST00000529802 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
FOXRED1-209ENST00000529802 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
FOXRED1-209ENST00000529802 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
FOXRED1-209ENST00000529802 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
FOXRED1-209ENST00000529802 STRCQ7RTU9 1775 aa23.04■■□□□ 1.28
FOXRED1-209ENST00000529802 DISP3Q9P2K9 1392 aa23.04■■□□□ 1.28
FOXRED1-209ENST00000529802 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
FOXRED1-209ENST00000529802 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
FOXRED1-209ENST00000529802 PLCH2O75038 1416 aa23.02■■□□□ 1.28
FOXRED1-209ENST00000529802 ATP10AO60312 1499 aa23.02■■□□□ 1.28
FOXRED1-209ENST00000529802 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
FOXRED1-209ENST00000529802 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
FOXRED1-209ENST00000529802 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
FOXRED1-209ENST00000529802 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
FOXRED1-209ENST00000529802 SOCS7O14512 581 aa22.94■■□□□ 1.26
FOXRED1-209ENST00000529802 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
FOXRED1-209ENST00000529802 KIF14Q15058 1648 aa22.93■■□□□ 1.26
FOXRED1-209ENST00000529802 KDM5CP41229 1560 aa22.93■■□□□ 1.26
FOXRED1-209ENST00000529802 DIP2CQ9Y2E4 1556 aa22.91■■□□□ 1.26
FOXRED1-209ENST00000529802 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
FOXRED1-209ENST00000529802 C3P01024 1663 aa22.89■■□□□ 1.25
FOXRED1-209ENST00000529802 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
FOXRED1-209ENST00000529802 ABCA6Q8N139 1617 aa22.87■■□□□ 1.25
FOXRED1-209ENST00000529802 REREQ9P2R6 1566 aa22.87■■□□□ 1.25
FOXRED1-209ENST00000529802 PTPRTO14522 1441 aa22.85■■□□□ 1.25
FOXRED1-209ENST00000529802 EFCAB2Q5VUJ9 269 aa22.85■■□□□ 1.25
FOXRED1-209ENST00000529802 ARHGAP5Q13017 1502 aa22.85■■□□□ 1.25
FOXRED1-209ENST00000529802 LTBP4Q8N2S1 1624 aa22.85■■□□□ 1.25
FOXRED1-209ENST00000529802 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
FOXRED1-209ENST00000529802 AFAP1Q8N556 730 aa22.81■■□□□ 1.24
FOXRED1-209ENST00000529802 FMN1Q68DA7 1419 aa22.79■■□□□ 1.24
FOXRED1-209ENST00000529802 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
FOXRED1-209ENST00000529802 TROQ12816 1431 aaPredicted RBP22.78■■□□□ 1.24
FOXRED1-209ENST00000529802 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
FOXRED1-209ENST00000529802 ATP1B4Q9UN42 357 aaPredicted RBP22.77■■□□□ 1.24
FOXRED1-209ENST00000529802 AGLP35573 1532 aa22.77■■□□□ 1.24
FOXRED1-209ENST00000529802 NCOA1Q15788 1441 aa22.76■■□□□ 1.23
FOXRED1-209ENST00000529802 IQSEC2Q5JU85 1478 aa22.76■■□□□ 1.23
FOXRED1-209ENST00000529802 MLH3Q9UHC1 1453 aa22.76■■□□□ 1.23
FOXRED1-209ENST00000529802 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
FOXRED1-209ENST00000529802 ABCC1P33527 1531 aa22.75■■□□□ 1.23
FOXRED1-209ENST00000529802 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
FOXRED1-209ENST00000529802 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
FOXRED1-209ENST00000529802 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
FOXRED1-209ENST00000529802 CLIP1P30622 1438 aa22.73■■□□□ 1.23
FOXRED1-209ENST00000529802 TRAPPC8Q9Y2L5 1435 aa22.73■■□□□ 1.23
FOXRED1-209ENST00000529802 KIDINS220Q9ULH0 1771 aa22.71■■□□□ 1.23
FOXRED1-209ENST00000529802 CDK11AQ9UQ88 783 aaPredicted RBP22.71■■□□□ 1.23
FOXRED1-209ENST00000529802 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
FOXRED1-209ENST00000529802 CNTLNQ9NXG0 1405 aa22.66■■□□□ 1.22
FOXRED1-209ENST00000529802 MROH2AA6NES4 1674 aa22.66■■□□□ 1.22
FOXRED1-209ENST00000529802 ESF1Q9H501 851 aaKnown RBP22.66■■□□□ 1.22
FOXRED1-209ENST00000529802 NPATQ14207 1427 aa22.62■■□□□ 1.21
FOXRED1-209ENST00000529802 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
FOXRED1-209ENST00000529802 ZNF142P52746 1687 aaPredicted RBP22.61■■□□□ 1.21
FOXRED1-209ENST00000529802 MYO3AQ8NEV4 1616 aa22.6■■□□□ 1.21
FOXRED1-209ENST00000529802 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
FOXRED1-209ENST00000529802 ZNF335Q9H4Z2 1342 aaPredicted RBP22.58■■□□□ 1.21
FOXRED1-209ENST00000529802 CLTCQ00610 1675 aaKnown RBP22.56■■□□□ 1.2
FOXRED1-209ENST00000529802 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
FOXRED1-209ENST00000529802 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
FOXRED1-209ENST00000529802 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
FOXRED1-209ENST00000529802 NCKAP5LQ9HCH0 1330 aa22.55■■□□□ 1.2
FOXRED1-209ENST00000529802 CEP170BQ9Y4F5 1589 aaPredicted RBP22.55■■□□□ 1.2
FOXRED1-209ENST00000529802 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
FOXRED1-209ENST00000529802 CCDC18Q5T9S5 1454 aa22.54■■□□□ 1.2
FOXRED1-209ENST00000529802 ZMYM3Q14202 1370 aa22.53■■□□□ 1.2
FOXRED1-209ENST00000529802 UBAP1LF5GYI3 381 aa22.53■■□□□ 1.2
FOXRED1-209ENST00000529802 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
FOXRED1-209ENST00000529802 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
FOXRED1-209ENST00000529802 CASKIN1Q8WXD9 1431 aa22.51■■□□□ 1.19
FOXRED1-209ENST00000529802 ATP7AQ04656 1500 aa22.5■■□□□ 1.19
FOXRED1-209ENST00000529802 INO80Q9ULG1 1556 aaPredicted RBP22.5■■□□□ 1.19
FOXRED1-209ENST00000529802 FYCO1Q9BQS8 1478 aa22.49■■□□□ 1.19
FOXRED1-209ENST00000529802 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
FOXRED1-209ENST00000529802 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
FOXRED1-209ENST00000529802 PKD2Q13563 968 aa22.45■■□□□ 1.18
FOXRED1-209ENST00000529802 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
FOXRED1-209ENST00000529802 MED1Q15648 1581 aaPredicted RBP22.45■■□□□ 1.18
FOXRED1-209ENST00000529802 GPATCH8Q9UKJ3 1502 aaKnown RBP22.43■■□□□ 1.18
FOXRED1-209ENST00000529802 A2MP01023 1474 aa22.43■■□□□ 1.18
FOXRED1-209ENST00000529802 ZNF777Q9ULD5 760 aaPredicted RBP22.43■■□□□ 1.18
FOXRED1-209ENST00000529802 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
FOXRED1-209ENST00000529802 DNMT1P26358 1616 aaKnown RBP22.39■■□□□ 1.18
FOXRED1-209ENST00000529802 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.175e-9■■■■■ 27.4
FOXRED1-209ENST00000529802 POLR1AO95602 1720 aaPredicted RBP22.39■■□□□ 1.17
FOXRED1-209ENST00000529802 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
FOXRED1-209ENST00000529802 ADGBQ8N7X0 1667 aa22.37■■□□□ 1.17
FOXRED1-209ENST00000529802 A2ML1A8K2U0 1454 aa22.37■■□□□ 1.17
FOXRED1-209ENST00000529802 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
FOXRED1-209ENST00000529802 HSPA1LP34931 641 aa22.35■■□□□ 1.17
FOXRED1-209ENST00000529802 GGT6Q6P531 493 aa22.35■■□□□ 1.17
FOXRED1-209ENST00000529802 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
FOXRED1-209ENST00000529802 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
FOXRED1-209ENST00000529802 CPS1P31327 1500 aa22.33■■□□□ 1.17
FOXRED1-209ENST00000529802 PIP4K2BP78356 416 aa22.31■■□□□ 1.16
FOXRED1-209ENST00000529802 VPS8Q8N3P4 1428 aa22.3■■□□□ 1.16
FOXRED1-209ENST00000529802 SHANK2Q9UPX8 1470 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms