RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RSPH4AQ5TD94 716 aa9.33□□□□□ -0.92
CTNND1-218ENST00000528232 GAPVD1Q14C86 1478 aa9.33□□□□□ -0.92
CTNND1-218ENST00000528232 EFCAB2Q5VUJ9 269 aa9.32□□□□□ -0.92
CTNND1-218ENST00000528232 PTMSP20962 102 aa9.32□□□□□ -0.92
CTNND1-218ENST00000528232 ARID4BQ4LE39 1312 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-218ENST00000528232 PNNQ9H307 717 aaKnown RBP9.32□□□□□ -0.92
CTNND1-218ENST00000528232 SENP3Q9H4L4 574 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-218ENST00000528232 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
CTNND1-218ENST00000528232 RALBP1Q15311 655 aa9.31□□□□□ -0.92
CTNND1-218ENST00000528232 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
CTNND1-218ENST00000528232 HMGXB3Q12766 1538 aa9.31□□□□□ -0.92
CTNND1-218ENST00000528232 MS4A1P11836 297 aa9.3□□□□□ -0.92
CTNND1-218ENST00000528232 GOLGA6L22H0YM25 854 aa9.3□□□□□ -0.92
CTNND1-218ENST00000528232 EIF3AQ14152 1382 aaKnown RBP9.3□□□□□ -0.92
CTNND1-218ENST00000528232 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
CTNND1-218ENST00000528232 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
CTNND1-218ENST00000528232 C14orf37Q86TY3 774 aa9.29□□□□□ -0.92
CTNND1-218ENST00000528232 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
CTNND1-218ENST00000528232 CFTRP13569 1480 aa9.28□□□□□ -0.92
CTNND1-218ENST00000528232 L3MBTL2Q969R5 705 aa9.28□□□□□ -0.92
CTNND1-218ENST00000528232 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
CTNND1-218ENST00000528232 LRRC9Q6ZRR7 1453 aa9.28□□□□□ -0.92
CTNND1-218ENST00000528232 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
CTNND1-218ENST00000528232 NEUROD2Q15784 382 aa9.27□□□□□ -0.92
CTNND1-218ENST00000528232 HNRNPMP52272 730 aaKnown RBP eCLIP9.27□□□□□ -0.935e-7■■■■□ 21
CTNND1-218ENST00000528232 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
CTNND1-218ENST00000528232 ZBTB7CA1YPR0 619 aa9.26□□□□□ -0.93
CTNND1-218ENST00000528232 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
CTNND1-218ENST00000528232 MORC1Q86VD1 984 aa9.26□□□□□ -0.93
CTNND1-218ENST00000528232 PRKCSHP14314 528 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-218ENST00000528232 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
CTNND1-218ENST00000528232 CASC1Q6TDU7 716 aa9.26□□□□□ -0.93
CTNND1-218ENST00000528232 FYCO1Q9BQS8 1478 aa9.26□□□□□ -0.93
CTNND1-218ENST00000528232 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
CTNND1-218ENST00000528232 B4GALNT3Q6L9W6 998 aa9.25□□□□□ -0.93
CTNND1-218ENST00000528232 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
CTNND1-218ENST00000528232 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
CTNND1-218ENST00000528232 FRAT1Q92837 279 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-218ENST00000528232 LAS1LQ9Y4W2 734 aaKnown RBP9.24□□□□□ -0.93
CTNND1-218ENST00000528232 SPAG9O60271 1321 aaKnown RBP9.24□□□□□ -0.93
CTNND1-218ENST00000528232 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
CTNND1-218ENST00000528232 GGT6Q6P531 493 aa9.23□□□□□ -0.93
CTNND1-218ENST00000528232 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
CTNND1-218ENST00000528232 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
CTNND1-218ENST00000528232 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
CTNND1-218ENST00000528232 PTPRGP23470 1445 aa9.22□□□□□ -0.93
CTNND1-218ENST00000528232 PHLDB1Q86UU1 1377 aa9.22□□□□□ -0.93
CTNND1-218ENST00000528232 RRBP1Q9P2E9 1410 aaKnown RBP9.22□□□□□ -0.93
CTNND1-218ENST00000528232 UACAQ9BZF9 1416 aa9.21□□□□□ -0.93
CTNND1-218ENST00000528232 PRXQ9BXM0 1461 aa9.21□□□□□ -0.93
CTNND1-218ENST00000528232 RGS3P49796 1198 aa9.21□□□□□ -0.93
CTNND1-218ENST00000528232 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-218ENST00000528232 USP35Q9P2H5 1018 aa9.21□□□□□ -0.93
CTNND1-218ENST00000528232 PTMAP06454 111 aaKnown RBP9.21□□□□□ -0.93
CTNND1-218ENST00000528232 HSP90AA2PQ14568 343 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-218ENST00000528232 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.94
CTNND1-218ENST00000528232 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
CTNND1-218ENST00000528232 KIF3BO15066 747 aa9.2□□□□□ -0.94
CTNND1-218ENST00000528232 CHAF1AQ13111 956 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-218ENST00000528232 RCAN3Q9UKA8 241 aa9.2□□□□□ -0.94
CTNND1-218ENST00000528232 GRIN2BQ13224 1484 aa9.2□□□□□ -0.94
CTNND1-218ENST00000528232 PKNOX2Q96KN3 472 aa9.2□□□□□ -0.94
CTNND1-218ENST00000528232 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
CTNND1-218ENST00000528232 DNTTIP2Q5QJE6 756 aaKnown RBP9.19□□□□□ -0.94
CTNND1-218ENST00000528232 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
CTNND1-218ENST00000528232 NLRP13Q86W25 1043 aa9.19□□□□□ -0.94
CTNND1-218ENST00000528232 PDE3BQ13370 1112 aa9.18□□□□□ -0.94
CTNND1-218ENST00000528232 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
CTNND1-218ENST00000528232 MYBBP1AQ9BQG0 1328 aaKnown RBP9.18□□□□□ -0.94
CTNND1-218ENST00000528232 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
CTNND1-218ENST00000528232 MSNP26038 577 aaKnown RBP9.18□□□□□ -0.94
CTNND1-218ENST00000528232 HAP1P54257 671 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-218ENST00000528232 TNNT3P45378 269 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-218ENST00000528232 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
CTNND1-218ENST00000528232 TIAM1Q13009 1591 aa9.17□□□□□ -0.94
CTNND1-218ENST00000528232 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
CTNND1-218ENST00000528232 AQRO60306 1485 aaKnown RBP eCLIP9.17□□□□□ -0.942e-9■■■□□ 18.1
CTNND1-218ENST00000528232 USP47Q96K76 1375 aa9.17□□□□□ -0.94
CTNND1-218ENST00000528232 SAFB2Q14151 953 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTNND1-218ENST00000528232 HECW1Q76N89 1606 aa9.17□□□□□ -0.94
CTNND1-218ENST00000528232 MRC2Q9UBG0 1479 aa9.17□□□□□ -0.94
CTNND1-218ENST00000528232 CALD1Q05682 793 aaKnown RBP9.16□□□□□ -0.94
CTNND1-218ENST00000528232 MLECQ14165 292 aa9.16□□□□□ -0.94
CTNND1-218ENST00000528232 ZRSR1Q15695 479 aaKnown RBP9.16□□□□□ -0.94
CTNND1-218ENST00000528232 STK26Q9P289 416 aa9.16□□□□□ -0.94
CTNND1-218ENST00000528232 PLEKHG5O94827 1062 aa9.16□□□□□ -0.94
CTNND1-218ENST00000528232 BICRAQ9NZM4 1560 aa9.16□□□□□ -0.94
CTNND1-218ENST00000528232 VSIG10Q8N0Z9 540 aa9.16□□□□□ -0.94
CTNND1-218ENST00000528232 IPO8O15397 1037 aaKnown RBP9.15□□□□□ -0.94
CTNND1-218ENST00000528232 CFAP44Q96MT7 982 aa9.15□□□□□ -0.94
CTNND1-218ENST00000528232 TCERG1O14776 1098 aaKnown RBP9.15□□□□□ -0.94
CTNND1-218ENST00000528232 IFT140Q96RY7 1462 aa9.15□□□□□ -0.95
CTNND1-218ENST00000528232 WASHC2CQ9Y4E1 1318 aa9.14□□□□□ -0.95
CTNND1-218ENST00000528232 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
CTNND1-218ENST00000528232 ST20-MTHFSA0A0A6YYL1 179 aa9.14□□□□□ -0.95
CTNND1-218ENST00000528232 POLA1P09884 1462 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-218ENST00000528232 PRKRIP1Q9H875 184 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-218ENST00000528232 TERF2IPQ9NYB0 399 aa9.14□□□□□ -0.95
CTNND1-218ENST00000528232 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
CTNND1-218ENST00000528232 U2AF1L5P0DN76 240 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms