RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PHLDB1Q86UU1 1377 aa20.25■□□□□ 0.83
USP47-207ENST00000527733 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
USP47-207ENST00000527733 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
USP47-207ENST00000527733 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
USP47-207ENST00000527733 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
USP47-207ENST00000527733 WASHC2CQ9Y4E1 1318 aa20.21■□□□□ 0.83
USP47-207ENST00000527733 TMF1P82094 1093 aa20.21■□□□□ 0.83
USP47-207ENST00000527733 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
USP47-207ENST00000527733 NCOA2Q15596 1464 aa20.2■□□□□ 0.82
USP47-207ENST00000527733 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
USP47-207ENST00000527733 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
USP47-207ENST00000527733 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
USP47-207ENST00000527733 HSPA5P11021 654 aaKnown RBP20.17■□□□□ 0.82
USP47-207ENST00000527733 CUL7Q14999 1698 aa20.15■□□□□ 0.82
USP47-207ENST00000527733 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
USP47-207ENST00000527733 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
USP47-207ENST00000527733 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
USP47-207ENST00000527733 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
USP47-207ENST00000527733 FKBP8Q14318 412 aa20.12■□□□□ 0.81
USP47-207ENST00000527733 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
USP47-207ENST00000527733 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
USP47-207ENST00000527733 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
USP47-207ENST00000527733 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
USP47-207ENST00000527733 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
USP47-207ENST00000527733 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
USP47-207ENST00000527733 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
USP47-207ENST00000527733 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.05■□□□□ 0.8
USP47-207ENST00000527733 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
USP47-207ENST00000527733 SRPK2P78362 688 aaKnown RBP20.05■□□□□ 0.8
USP47-207ENST00000527733 STK26Q9P289 416 aa20.05■□□□□ 0.8
USP47-207ENST00000527733 EHBP1L1Q8N3D4 1523 aa20.04■□□□□ 0.8
USP47-207ENST00000527733 SAFB2Q14151 953 aaKnown RBP eCLIP20.04■□□□□ 0.89e-7■■■■□ 22.3
USP47-207ENST00000527733 PLEKHG5O94827 1062 aa20.04■□□□□ 0.8
USP47-207ENST00000527733 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
USP47-207ENST00000527733 TIAM1Q13009 1591 aa20.02■□□□□ 0.8
USP47-207ENST00000527733 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
USP47-207ENST00000527733 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
USP47-207ENST00000527733 BCL11AQ9H165 835 aa20.02■□□□□ 0.8
USP47-207ENST00000527733 CC2D1BQ5T0F9 858 aaKnown RBP20.02■□□□□ 0.79
USP47-207ENST00000527733 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
USP47-207ENST00000527733 UACAQ9BZF9 1416 aa20.01■□□□□ 0.79
USP47-207ENST00000527733 ANKRD50Q9ULJ7 1429 aa20■□□□□ 0.79
USP47-207ENST00000527733 ARHGAP5Q13017 1502 aa20■□□□□ 0.79
USP47-207ENST00000527733 AFAP1Q8N556 730 aa20■□□□□ 0.79
USP47-207ENST00000527733 EPRSP07814 1512 aaKnown RBP19.98■□□□□ 0.79
USP47-207ENST00000527733 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
USP47-207ENST00000527733 TNNT2P45379 298 aaPredicted RBP19.96■□□□□ 0.79
USP47-207ENST00000527733 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
USP47-207ENST00000527733 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
USP47-207ENST00000527733 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
USP47-207ENST00000527733 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
USP47-207ENST00000527733 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
USP47-207ENST00000527733 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
USP47-207ENST00000527733 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
USP47-207ENST00000527733 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
USP47-207ENST00000527733 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
USP47-207ENST00000527733 CCDC136Q96JN2 1154 aa19.9■□□□□ 0.78
USP47-207ENST00000527733 VGFO15240 615 aaPredicted RBP19.9■□□□□ 0.78
USP47-207ENST00000527733 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
USP47-207ENST00000527733 MORC1Q86VD1 984 aa19.89■□□□□ 0.77
USP47-207ENST00000527733 MAPK8IP3Q9UPT6 1336 aa19.89■□□□□ 0.77
USP47-207ENST00000527733 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
USP47-207ENST00000527733 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
USP47-207ENST00000527733 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
USP47-207ENST00000527733 C9orf84Q5VXU9 1444 aa19.86■□□□□ 0.77
USP47-207ENST00000527733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.77
USP47-207ENST00000527733 NEUROD2Q15784 382 aa19.85■□□□□ 0.77
USP47-207ENST00000527733 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
USP47-207ENST00000527733 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
USP47-207ENST00000527733 U2SURPO15042 1029 aaKnown RBP19.84■□□□□ 0.77
USP47-207ENST00000527733 MAP3K1Q13233 1512 aa19.84■□□□□ 0.77
USP47-207ENST00000527733 TRAK1Q9UPV9 953 aa19.83■□□□□ 0.77
USP47-207ENST00000527733 IRX6P78412 446 aaPredicted RBP19.82■□□□□ 0.76
USP47-207ENST00000527733 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
USP47-207ENST00000527733 RALBP1Q15311 655 aa19.81■□□□□ 0.76
USP47-207ENST00000527733 HFM1A2PYH4 1435 aa19.81■□□□□ 0.76
USP47-207ENST00000527733 PNNQ9H307 717 aaKnown RBP19.8■□□□□ 0.76
USP47-207ENST00000527733 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
USP47-207ENST00000527733 DAPK1P53355 1430 aa19.79■□□□□ 0.76
USP47-207ENST00000527733 TERF2IPQ9NYB0 399 aa19.77■□□□□ 0.76
USP47-207ENST00000527733 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
USP47-207ENST00000527733 A0A0G2JS52 829 aa19.76■□□□□ 0.75
USP47-207ENST00000527733 USP47Q96K76 1375 aa19.76■□□□□ 0.75
USP47-207ENST00000527733 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
USP47-207ENST00000527733 SOX12O15370 315 aa19.76■□□□□ 0.75
USP47-207ENST00000527733 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
USP47-207ENST00000527733 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
USP47-207ENST00000527733 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
USP47-207ENST00000527733 SUPT16HQ9Y5B9 1047 aaKnown RBP19.73■□□□□ 0.75
USP47-207ENST00000527733 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
USP47-207ENST00000527733 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
USP47-207ENST00000527733 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
USP47-207ENST00000527733 WDR62O43379 1518 aa19.7■□□□□ 0.74
USP47-207ENST00000527733 MYH16Q9H6N6 1097 aa19.69■□□□□ 0.74
USP47-207ENST00000527733 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
USP47-207ENST00000527733 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
USP47-207ENST00000527733 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
USP47-207ENST00000527733 NAIPQ13075 1403 aa19.67■□□□□ 0.74
USP47-207ENST00000527733 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
USP47-207ENST00000527733 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms