RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
C11orf54-205ENST00000527363 MED1Q15648 1581 aaPredicted RBP18.31■□□□□ 0.52
C11orf54-205ENST00000527363 SETD1BQ9UPS6 1966 aaKnown RBP18.3■□□□□ 0.52
C11orf54-205ENST00000527363 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
C11orf54-205ENST00000527363 ATP10AO60312 1499 aa18.27■□□□□ 0.52
C11orf54-205ENST00000527363 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
C11orf54-205ENST00000527363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
C11orf54-205ENST00000527363 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
C11orf54-205ENST00000527363 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
C11orf54-205ENST00000527363 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
C11orf54-205ENST00000527363 HSPA1LP34931 641 aa18.25■□□□□ 0.51
C11orf54-205ENST00000527363 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
C11orf54-205ENST00000527363 HECW1Q76N89 1606 aa18.21■□□□□ 0.51
C11orf54-205ENST00000527363 PLEKHD1A6NEE1 506 aa18.21■□□□□ 0.51
C11orf54-205ENST00000527363 ZNF335Q9H4Z2 1342 aaPredicted RBP18.21■□□□□ 0.51
C11orf54-205ENST00000527363 TOM1O60784 492 aa18.19■□□□□ 0.5
C11orf54-205ENST00000527363 FOXD1Q16676 465 aa18.17■□□□□ 0.5
C11orf54-205ENST00000527363 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
C11orf54-205ENST00000527363 PKD2Q13563 968 aa18.16■□□□□ 0.5
C11orf54-205ENST00000527363 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
C11orf54-205ENST00000527363 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
C11orf54-205ENST00000527363 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
C11orf54-205ENST00000527363 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
C11orf54-205ENST00000527363 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
C11orf54-205ENST00000527363 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
C11orf54-205ENST00000527363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.09■□□□□ 0.49
C11orf54-205ENST00000527363 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
C11orf54-205ENST00000527363 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
C11orf54-205ENST00000527363 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.49
C11orf54-205ENST00000527363 NCKAP5LQ9HCH0 1330 aa18.08■□□□□ 0.49
C11orf54-205ENST00000527363 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
C11orf54-205ENST00000527363 PLCH2O75038 1416 aa18.07■□□□□ 0.48
C11orf54-205ENST00000527363 NPATQ14207 1427 aa18.07■□□□□ 0.48
C11orf54-205ENST00000527363 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
C11orf54-205ENST00000527363 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
C11orf54-205ENST00000527363 AGLP35573 1532 aa18.04■□□□□ 0.48
C11orf54-205ENST00000527363 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
C11orf54-205ENST00000527363 C3P01024 1663 aa18.03■□□□□ 0.48
C11orf54-205ENST00000527363 ZNF518AQ6AHZ1 1483 aa18.03■□□□□ 0.48
C11orf54-205ENST00000527363 REREQ9P2R6 1566 aa18.03■□□□□ 0.48
C11orf54-205ENST00000527363 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
C11orf54-205ENST00000527363 PTPRKQ15262 1439 aa18.01■□□□□ 0.47
C11orf54-205ENST00000527363 PRXQ9BXM0 1461 aa18■□□□□ 0.47
C11orf54-205ENST00000527363 CPS1P31327 1500 aa17.99■□□□□ 0.47
C11orf54-205ENST00000527363 RGS17Q9UGC6 210 aaPredicted RBP17.99■□□□□ 0.47
C11orf54-205ENST00000527363 AFAP1Q8N556 730 aa17.96■□□□□ 0.47
C11orf54-205ENST00000527363 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
C11orf54-205ENST00000527363 SAMD9Q5K651 1589 aa17.96■□□□□ 0.46
C11orf54-205ENST00000527363 KDM5CP41229 1560 aa17.95■□□□□ 0.46
C11orf54-205ENST00000527363 ZMYM3Q14202 1370 aa17.93■□□□□ 0.46
C11orf54-205ENST00000527363 MLH3Q9UHC1 1453 aa17.93■□□□□ 0.46
C11orf54-205ENST00000527363 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
C11orf54-205ENST00000527363 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
C11orf54-205ENST00000527363 MROH2AA6NES4 1674 aa17.84■□□□□ 0.45
C11orf54-205ENST00000527363 ZNF142P52746 1687 aaPredicted RBP17.84■□□□□ 0.45
C11orf54-205ENST00000527363 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
C11orf54-205ENST00000527363 POTEAQ6S8J7 498 aa17.83■□□□□ 0.44
C11orf54-205ENST00000527363 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
C11orf54-205ENST00000527363 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
C11orf54-205ENST00000527363 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
C11orf54-205ENST00000527363 MYO3AQ8NEV4 1616 aa17.79■□□□□ 0.44
C11orf54-205ENST00000527363 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.43
C11orf54-205ENST00000527363 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
C11orf54-205ENST00000527363 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
C11orf54-205ENST00000527363 ANKLE2Q86XL3 938 aa17.74■□□□□ 0.43
C11orf54-205ENST00000527363 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.43
C11orf54-205ENST00000527363 CDK13Q14004 1512 aaKnown RBP17.71■□□□□ 0.43
C11orf54-205ENST00000527363 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
C11orf54-205ENST00000527363 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
C11orf54-205ENST00000527363 NEURL4Q96JN8 1562 aa17.69■□□□□ 0.42
C11orf54-205ENST00000527363 DNMT1P26358 1616 aaKnown RBP17.69■□□□□ 0.42
C11orf54-205ENST00000527363 THEMISQ8N1K5 641 aaPredicted RBP17.67■□□□□ 0.42
C11orf54-205ENST00000527363 MED14O60244 1454 aa17.67■□□□□ 0.42
C11orf54-205ENST00000527363 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
C11orf54-205ENST00000527363 SRCAPQ6ZRS2 3230 aa17.66■□□□□ 0.42
C11orf54-205ENST00000527363 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
C11orf54-205ENST00000527363 CLIP1P30622 1438 aa17.65■□□□□ 0.42
C11orf54-205ENST00000527363 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
C11orf54-205ENST00000527363 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
C11orf54-205ENST00000527363 KIF14Q15058 1648 aa17.65■□□□□ 0.42
C11orf54-205ENST00000527363 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.42
C11orf54-205ENST00000527363 ABCC1P33527 1531 aa17.64■□□□□ 0.41
C11orf54-205ENST00000527363 FAM135BQ49AJ0 1406 aa17.64■□□□□ 0.41
C11orf54-205ENST00000527363 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
C11orf54-205ENST00000527363 GGT6Q6P531 493 aa17.62■□□□□ 0.41
C11orf54-205ENST00000527363 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
C11orf54-205ENST00000527363 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
C11orf54-205ENST00000527363 SPAG9O60271 1321 aaKnown RBP17.6■□□□□ 0.41
C11orf54-205ENST00000527363 CLTCQ00610 1675 aaKnown RBP17.6■□□□□ 0.41
C11orf54-205ENST00000527363 SYNMO15061 1565 aa17.59■□□□□ 0.41
C11orf54-205ENST00000527363 TNRQ92752 1358 aa17.59■□□□□ 0.41
C11orf54-205ENST00000527363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
C11orf54-205ENST00000527363 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
C11orf54-205ENST00000527363 DEPDC5O75140 1603 aa17.57■□□□□ 0.4
C11orf54-205ENST00000527363 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
C11orf54-205ENST00000527363 A2MP01023 1474 aa17.56■□□□□ 0.4
C11orf54-205ENST00000527363 PLXNC1O60486 1568 aa17.54■□□□□ 0.4
C11orf54-205ENST00000527363 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
C11orf54-205ENST00000527363 FAM135AQ9P2D6 1515 aa17.54■□□□□ 0.4
C11orf54-205ENST00000527363 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms