RNA–Protein interactions for RNA: ENST00000527308.5

PDZD3-207, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-207ENST00000527308 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
PDZD3-207ENST00000527308 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
PDZD3-207ENST00000527308 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
PDZD3-207ENST00000527308 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
PDZD3-207ENST00000527308 RANGAP1P46060 587 aaPredicted RBP17.05■□□□□ 0.32
PDZD3-207ENST00000527308 ATP10AO60312 1499 aa17.05■□□□□ 0.32
PDZD3-207ENST00000527308 MLECQ14165 292 aa17.04■□□□□ 0.32
PDZD3-207ENST00000527308 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
PDZD3-207ENST00000527308 MYO5CQ9NQX4 1742 aa17.01■□□□□ 0.31
PDZD3-207ENST00000527308 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
PDZD3-207ENST00000527308 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
PDZD3-207ENST00000527308 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
PDZD3-207ENST00000527308 SETD1BQ9UPS6 1966 aaKnown RBP16.98■□□□□ 0.31
PDZD3-207ENST00000527308 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
PDZD3-207ENST00000527308 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
PDZD3-207ENST00000527308 ZNF518AQ6AHZ1 1483 aa16.97■□□□□ 0.31
PDZD3-207ENST00000527308 KDM5CP41229 1560 aa16.95■□□□□ 0.3
PDZD3-207ENST00000527308 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
PDZD3-207ENST00000527308 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
PDZD3-207ENST00000527308 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
PDZD3-207ENST00000527308 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
PDZD3-207ENST00000527308 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
PDZD3-207ENST00000527308 KIF14Q15058 1648 aa16.92■□□□□ 0.3
PDZD3-207ENST00000527308 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
PDZD3-207ENST00000527308 PTPRTO14522 1441 aa16.9■□□□□ 0.3
PDZD3-207ENST00000527308 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.3
PDZD3-207ENST00000527308 C3P01024 1663 aa16.89■□□□□ 0.29
PDZD3-207ENST00000527308 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.29
PDZD3-207ENST00000527308 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
PDZD3-207ENST00000527308 MLH3Q9UHC1 1453 aa16.88■□□□□ 0.29
PDZD3-207ENST00000527308 SOCS7O14512 581 aa16.88■□□□□ 0.29
PDZD3-207ENST00000527308 AFAP1Q8N556 730 aa16.88■□□□□ 0.29
PDZD3-207ENST00000527308 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
PDZD3-207ENST00000527308 AGLP35573 1532 aa16.87■□□□□ 0.29
PDZD3-207ENST00000527308 ILDR2Q71H61 639 aa16.87■□□□□ 0.29
PDZD3-207ENST00000527308 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
PDZD3-207ENST00000527308 CLIP1P30622 1438 aa16.87■□□□□ 0.29
PDZD3-207ENST00000527308 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
PDZD3-207ENST00000527308 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
PDZD3-207ENST00000527308 IQSEC2Q5JU85 1478 aa16.85■□□□□ 0.29
PDZD3-207ENST00000527308 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
PDZD3-207ENST00000527308 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
PDZD3-207ENST00000527308 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
PDZD3-207ENST00000527308 LTBP4Q8N2S1 1624 aa16.82■□□□□ 0.28
PDZD3-207ENST00000527308 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
PDZD3-207ENST00000527308 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
PDZD3-207ENST00000527308 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
PDZD3-207ENST00000527308 CNTLNQ9NXG0 1405 aa16.8■□□□□ 0.28
PDZD3-207ENST00000527308 ITSN2Q9NZM3 1697 aa16.8■□□□□ 0.28
PDZD3-207ENST00000527308 SPATA31D1Q6ZQQ2 1576 aa16.8■□□□□ 0.28
PDZD3-207ENST00000527308 ABCC1P33527 1531 aa16.8■□□□□ 0.28
PDZD3-207ENST00000527308 KIDINS220Q9ULH0 1771 aa16.79■□□□□ 0.28
PDZD3-207ENST00000527308 MROH2AA6NES4 1674 aa16.78■□□□□ 0.28
PDZD3-207ENST00000527308 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
PDZD3-207ENST00000527308 NPATQ14207 1427 aa16.75■□□□□ 0.27
PDZD3-207ENST00000527308 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
PDZD3-207ENST00000527308 CDC42BPAQ5VT25 1732 aa16.74■□□□□ 0.27
PDZD3-207ENST00000527308 CAMSAP1Q5T5Y3 1602 aa16.73■□□□□ 0.27
PDZD3-207ENST00000527308 SAMD9LQ8IVG5 1584 aa16.71■□□□□ 0.27
PDZD3-207ENST00000527308 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
PDZD3-207ENST00000527308 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
PDZD3-207ENST00000527308 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
PDZD3-207ENST00000527308 ZNF142P52746 1687 aaPredicted RBP16.68■□□□□ 0.26
PDZD3-207ENST00000527308 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
PDZD3-207ENST00000527308 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
PDZD3-207ENST00000527308 PKD2Q13563 968 aa16.65■□□□□ 0.26
PDZD3-207ENST00000527308 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
PDZD3-207ENST00000527308 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
PDZD3-207ENST00000527308 SYCP2Q9BX26 1530 aa16.64■□□□□ 0.25
PDZD3-207ENST00000527308 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
PDZD3-207ENST00000527308 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
PDZD3-207ENST00000527308 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
PDZD3-207ENST00000527308 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
PDZD3-207ENST00000527308 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-207ENST00000527308 NCKAP5LQ9HCH0 1330 aa16.63■□□□□ 0.25
PDZD3-207ENST00000527308 CEP170BQ9Y4F5 1589 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-207ENST00000527308 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
PDZD3-207ENST00000527308 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
PDZD3-207ENST00000527308 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
PDZD3-207ENST00000527308 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
PDZD3-207ENST00000527308 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
PDZD3-207ENST00000527308 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
PDZD3-207ENST00000527308 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
PDZD3-207ENST00000527308 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
PDZD3-207ENST00000527308 PTPRKQ15262 1439 aa16.61■□□□□ 0.25
PDZD3-207ENST00000527308 A2MP01023 1474 aa16.61■□□□□ 0.25
PDZD3-207ENST00000527308 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
PDZD3-207ENST00000527308 HNRNPMP52272 730 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDZD3-207ENST00000527308 ADGBQ8N7X0 1667 aa16.58■□□□□ 0.24
PDZD3-207ENST00000527308 GGT6Q6P531 493 aa16.56■□□□□ 0.24
PDZD3-207ENST00000527308 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
PDZD3-207ENST00000527308 DNMT1P26358 1616 aaKnown RBP16.54■□□□□ 0.24
PDZD3-207ENST00000527308 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
PDZD3-207ENST00000527308 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
PDZD3-207ENST00000527308 POLR1AO95602 1720 aaPredicted RBP16.52■□□□□ 0.24
PDZD3-207ENST00000527308 CPS1P31327 1500 aa16.51■□□□□ 0.23
PDZD3-207ENST00000527308 RTEL1-TNFRSF6BF6WH68 1400 aa16.51■□□□□ 0.23
PDZD3-207ENST00000527308 TOM1O60784 492 aa16.49■□□□□ 0.23
PDZD3-207ENST00000527308 FAM135AQ9P2D6 1515 aa16.48■□□□□ 0.23
PDZD3-207ENST00000527308 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms