RNA–Protein interactions for RNA: ENST00000527129.1

CAPN5-204, Transcript of calpain 5, humanhuman

TSL 2

Gene CAPN5, Length 2,564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-204ENST00000527129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.44
CAPN5-204ENST00000527129 ABCC10Q5T3U5 1492 aa24.04■■□□□ 1.44
CAPN5-204ENST00000527129 NPM1P06748 294 aaKnown RBP eCLIP24.01■■□□□ 1.43
CAPN5-204ENST00000527129 RRP7BPQ9NSQ0 103 aa24■■□□□ 1.43
CAPN5-204ENST00000527129 TCOF1Q13428 1488 aaKnown RBP24■■□□□ 1.43
CAPN5-204ENST00000527129 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
CAPN5-204ENST00000527129 RAB3GAP2Q9H2M9 1393 aa23.99■■□□□ 1.43
CAPN5-204ENST00000527129 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
CAPN5-204ENST00000527129 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
CAPN5-204ENST00000527129 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
CAPN5-204ENST00000527129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.43
CAPN5-204ENST00000527129 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
CAPN5-204ENST00000527129 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.43
CAPN5-204ENST00000527129 CAMSAP2Q08AD1 1489 aa23.95■■□□□ 1.42
CAPN5-204ENST00000527129 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.42
CAPN5-204ENST00000527129 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
CAPN5-204ENST00000527129 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
CAPN5-204ENST00000527129 ITSN2Q9NZM3 1697 aa23.93■■□□□ 1.42
CAPN5-204ENST00000527129 WDR7Q9Y4E6 1490 aa23.91■■□□□ 1.42
CAPN5-204ENST00000527129 ABCC5O15440 1437 aa23.9■■□□□ 1.42
CAPN5-204ENST00000527129 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
CAPN5-204ENST00000527129 DAPK1P53355 1430 aa23.89■■□□□ 1.42
CAPN5-204ENST00000527129 ARHGAP5Q13017 1502 aa23.87■■□□□ 1.41
CAPN5-204ENST00000527129 CDC42BPBQ9Y5S2 1711 aa23.86■■□□□ 1.41
CAPN5-204ENST00000527129 DHX57Q6P158 1386 aaKnown RBP23.85■■□□□ 1.41
CAPN5-204ENST00000527129 PLEKHG5O94827 1062 aa23.84■■□□□ 1.41
CAPN5-204ENST00000527129 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
CAPN5-204ENST00000527129 NAIPQ13075 1403 aa23.83■■□□□ 1.41
CAPN5-204ENST00000527129 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
CAPN5-204ENST00000527129 PREX2Q70Z35 1606 aa23.82■■□□□ 1.4
CAPN5-204ENST00000527129 DNMT1P26358 1616 aaKnown RBP23.82■■□□□ 1.4
CAPN5-204ENST00000527129 SAMD9LQ8IVG5 1584 aa23.8■■□□□ 1.4
CAPN5-204ENST00000527129 PLCH2O75038 1416 aa23.79■■□□□ 1.4
CAPN5-204ENST00000527129 UBE2Q2Q8WVN8 375 aa23.79■■□□□ 1.4
CAPN5-204ENST00000527129 MYO5CQ9NQX4 1742 aa23.78■■□□□ 1.4
CAPN5-204ENST00000527129 EFCAB2Q5VUJ9 269 aa23.78■■□□□ 1.4
CAPN5-204ENST00000527129 TSPY4P0CV99 314 aa23.76■■□□□ 1.39
CAPN5-204ENST00000527129 TSPY10P0CW01 314 aa23.76■■□□□ 1.39
CAPN5-204ENST00000527129 AKNAQ7Z591 1439 aa23.75■■□□□ 1.39
CAPN5-204ENST00000527129 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
CAPN5-204ENST00000527129 SYCP2Q9BX26 1530 aa23.74■■□□□ 1.39
CAPN5-204ENST00000527129 KDM6BO15054 1643 aa23.73■■□□□ 1.39
CAPN5-204ENST00000527129 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
CAPN5-204ENST00000527129 ARHGEF12Q9NZN5 1544 aa23.7■■□□□ 1.39
CAPN5-204ENST00000527129 C9orf84Q5VXU9 1444 aa23.7■■□□□ 1.38
CAPN5-204ENST00000527129 NCOA1Q15788 1441 aa23.7■■□□□ 1.38
CAPN5-204ENST00000527129 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
CAPN5-204ENST00000527129 ABCA9Q8IUA7 1624 aa23.68■■□□□ 1.38
CAPN5-204ENST00000527129 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
CAPN5-204ENST00000527129 FANCAO15360 1455 aa23.66■■□□□ 1.38
CAPN5-204ENST00000527129 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
CAPN5-204ENST00000527129 CD109Q6YHK3 1445 aa23.66■■□□□ 1.38
CAPN5-204ENST00000527129 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
CAPN5-204ENST00000527129 ANO8Q9HCE9 1232 aaPredicted RBP23.65■■□□□ 1.38
CAPN5-204ENST00000527129 CROCC2H7BZ55 1655 aa23.65■■□□□ 1.38
CAPN5-204ENST00000527129 TRAPPC8Q9Y2L5 1435 aa23.64■■□□□ 1.38
CAPN5-204ENST00000527129 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
CAPN5-204ENST00000527129 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
CAPN5-204ENST00000527129 RSPH4AQ5TD94 716 aa23.62■■□□□ 1.37
CAPN5-204ENST00000527129 ARHGEF5Q12774 1597 aa23.62■■□□□ 1.37
CAPN5-204ENST00000527129 SIN3AQ96ST3 1273 aa23.61■■□□□ 1.37
CAPN5-204ENST00000527129 KIAA1107Q9UPP5 1409 aa23.61■■□□□ 1.37
CAPN5-204ENST00000527129 MAPKBP1O60336 1514 aa23.61■■□□□ 1.37
CAPN5-204ENST00000527129 MYT1LQ9UL68 1186 aa23.6■■□□□ 1.37
CAPN5-204ENST00000527129 PLEKHH2Q8IVE3 1493 aa23.6■■□□□ 1.37
CAPN5-204ENST00000527129 KIF15Q9NS87 1388 aa23.59■■□□□ 1.37
CAPN5-204ENST00000527129 ADGRL2O95490 1459 aa23.59■■□□□ 1.37
CAPN5-204ENST00000527129 ABCC1P33527 1531 aa23.59■■□□□ 1.37
CAPN5-204ENST00000527129 FOXD1Q16676 465 aa23.58■■□□□ 1.37
CAPN5-204ENST00000527129 SHANK2Q9UPX8 1470 aa23.58■■□□□ 1.37
CAPN5-204ENST00000527129 SCAPERQ9BY12 1400 aa23.58■■□□□ 1.36
CAPN5-204ENST00000527129 ADGBQ8N7X0 1667 aa23.58■■□□□ 1.36
CAPN5-204ENST00000527129 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
CAPN5-204ENST00000527129 ANKRD50Q9ULJ7 1429 aa23.56■■□□□ 1.36
CAPN5-204ENST00000527129 ARAP3Q8WWN8 1544 aa23.55■■□□□ 1.36
CAPN5-204ENST00000527129 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
CAPN5-204ENST00000527129 SPAG9O60271 1321 aaKnown RBP23.54■■□□□ 1.36
CAPN5-204ENST00000527129 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
CAPN5-204ENST00000527129 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
CAPN5-204ENST00000527129 RAPGEF3O95398 923 aa23.48■■□□□ 1.35
CAPN5-204ENST00000527129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.35
CAPN5-204ENST00000527129 DENND4BO75064 1496 aaPredicted RBP23.47■■□□□ 1.35
CAPN5-204ENST00000527129 NUP155O75694 1391 aa23.44■■□□□ 1.34
CAPN5-204ENST00000527129 DIP2BQ9P265 1576 aa23.44■■□□□ 1.34
CAPN5-204ENST00000527129 PODXL2Q9NZ53 605 aa23.44■■□□□ 1.34
CAPN5-204ENST00000527129 MAST1Q9Y2H9 1570 aa23.43■■□□□ 1.34
CAPN5-204ENST00000527129 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
CAPN5-204ENST00000527129 MAP3K4Q9Y6R4 1608 aa23.41■■□□□ 1.34
CAPN5-204ENST00000527129 PZPP20742 1482 aa23.39■■□□□ 1.34
CAPN5-204ENST00000527129 PKD2Q13563 968 aa23.39■■□□□ 1.33
CAPN5-204ENST00000527129 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
CAPN5-204ENST00000527129 GLI2P10070 1586 aa23.38■■□□□ 1.33
CAPN5-204ENST00000527129 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
CAPN5-204ENST00000527129 ATP7AQ04656 1500 aa23.36■■□□□ 1.33
CAPN5-204ENST00000527129 PLXNC1O60486 1568 aa23.36■■□□□ 1.33
CAPN5-204ENST00000527129 POGZQ7Z3K3 1410 aa23.35■■□□□ 1.33
CAPN5-204ENST00000527129 NEO1Q92859 1461 aa23.35■■□□□ 1.33
CAPN5-204ENST00000527129 RTEL1-TNFRSF6BF6WH68 1400 aa23.35■■□□□ 1.33
CAPN5-204ENST00000527129 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
CAPN5-204ENST00000527129 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms