RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 ARID3CA6NKF2 412 aa15.23■□□□□ 0.03
PTPMT1-204ENST00000527079 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
PTPMT1-204ENST00000527079 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
PTPMT1-204ENST00000527079 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
PTPMT1-204ENST00000527079 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
PTPMT1-204ENST00000527079 ADCY10Q96PN6 1610 aa15.21■□□□□ 0.02
PTPMT1-204ENST00000527079 CARMIL2Q6F5E8 1435 aa15.2■□□□□ 0.02
PTPMT1-204ENST00000527079 NUP160Q12769 1436 aa15.19■□□□□ 0.02
PTPMT1-204ENST00000527079 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
PTPMT1-204ENST00000527079 PRG4Q92954 1404 aaPredicted RBP15.16■□□□□ 0.02
PTPMT1-204ENST00000527079 RPRD2Q5VT52 1461 aaKnown RBP15.16■□□□□ 0.02
PTPMT1-204ENST00000527079 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
PTPMT1-204ENST00000527079 CAMSAP2Q08AD1 1489 aa15.16■□□□□ 0.02
PTPMT1-204ENST00000527079 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
PTPMT1-204ENST00000527079 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
PTPMT1-204ENST00000527079 GPATCH8Q9UKJ3 1502 aaKnown RBP15.14■□□□□ 0.01
PTPMT1-204ENST00000527079 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTPMT1-204ENST00000527079 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
PTPMT1-204ENST00000527079 CFDP1Q9UEE9 299 aaPredicted RBP15.14■□□□□ 0.01
PTPMT1-204ENST00000527079 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
PTPMT1-204ENST00000527079 HSPA5P11021 654 aaKnown RBP15.13■□□□□ 0.01
PTPMT1-204ENST00000527079 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
PTPMT1-204ENST00000527079 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
PTPMT1-204ENST00000527079 NCOA1Q15788 1441 aa15.12■□□□□ 0.01
PTPMT1-204ENST00000527079 KIF14Q15058 1648 aa15.12■□□□□ 0.01
PTPMT1-204ENST00000527079 ABCA8O94911 1581 aa15.11■□□□□ 0.01
PTPMT1-204ENST00000527079 TEX14Q8IWB6 1497 aa15.11■□□□□ 0.01
PTPMT1-204ENST00000527079 FBLN2P98095 1184 aa15.1■□□□□ 0.01
PTPMT1-204ENST00000527079 SLC4A1APQ9BWU0 796 aaKnown RBP15.1■□□□□ 0.01
PTPMT1-204ENST00000527079 WASHC2AQ641Q2 1341 aa15.09■□□□□ 0.01
PTPMT1-204ENST00000527079 FOXD1Q16676 465 aa15.09■□□□□ 0.01
PTPMT1-204ENST00000527079 PZPP20742 1482 aa15.08■□□□□ 0
PTPMT1-204ENST00000527079 ANKRD30AQ9BXX3 1397 aa15.07■□□□□ 0
PTPMT1-204ENST00000527079 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
PTPMT1-204ENST00000527079 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
PTPMT1-204ENST00000527079 CNTLNQ9NXG0 1405 aa15.05■□□□□ 0
PTPMT1-204ENST00000527079 ABCC10Q5T3U5 1492 aa15.05■□□□□ 0
PTPMT1-204ENST00000527079 SHANK2Q9UPX8 1470 aa15.05■□□□□ 0
PTPMT1-204ENST00000527079 ATP10BO94823 1461 aa15.04■□□□□ -0
PTPMT1-204ENST00000527079 POLR1AO95602 1720 aaPredicted RBP15.04■□□□□ -0
PTPMT1-204ENST00000527079 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
PTPMT1-204ENST00000527079 CCDC7Q96M83 1385 aa15.02■□□□□ -0
PTPMT1-204ENST00000527079 NBPF8Q3BBV2 869 aa15.02□□□□□ -0.01
PTPMT1-204ENST00000527079 ZNF777Q9ULD5 760 aaPredicted RBP15.02□□□□□ -0.01
PTPMT1-204ENST00000527079 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
PTPMT1-204ENST00000527079 ANKRD50Q9ULJ7 1429 aa15.01□□□□□ -0.01
PTPMT1-204ENST00000527079 NEFLP07196 543 aa15□□□□□ -0.01
PTPMT1-204ENST00000527079 MBD5Q9P267 1494 aa15□□□□□ -0.01
PTPMT1-204ENST00000527079 FKBP8Q14318 412 aa14.99□□□□□ -0.01
PTPMT1-204ENST00000527079 C9orf84Q5VXU9 1444 aa14.99□□□□□ -0.01
PTPMT1-204ENST00000527079 ARHGEF5Q12774 1597 aa14.98□□□□□ -0.01
PTPMT1-204ENST00000527079 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
PTPMT1-204ENST00000527079 PTPRGP23470 1445 aa14.96□□□□□ -0.01
PTPMT1-204ENST00000527079 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
PTPMT1-204ENST00000527079 PKD2Q13563 968 aa14.96□□□□□ -0.01
PTPMT1-204ENST00000527079 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
PTPMT1-204ENST00000527079 TSPY10P0CW01 314 aa14.95□□□□□ -0.02
PTPMT1-204ENST00000527079 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
PTPMT1-204ENST00000527079 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTPMT1-204ENST00000527079 MYT1Q01538 1121 aa14.93□□□□□ -0.02
PTPMT1-204ENST00000527079 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
PTPMT1-204ENST00000527079 NUP155O75694 1391 aa14.93□□□□□ -0.02
PTPMT1-204ENST00000527079 PREX2Q70Z35 1606 aa14.92□□□□□ -0.02
PTPMT1-204ENST00000527079 ARHGEF12Q9NZN5 1544 aa14.92□□□□□ -0.02
PTPMT1-204ENST00000527079 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
PTPMT1-204ENST00000527079 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
PTPMT1-204ENST00000527079 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
PTPMT1-204ENST00000527079 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
PTPMT1-204ENST00000527079 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
PTPMT1-204ENST00000527079 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
PTPMT1-204ENST00000527079 CDC42BPBQ9Y5S2 1711 aa14.9□□□□□ -0.02
PTPMT1-204ENST00000527079 SHROOM2Q13796 1616 aa14.9□□□□□ -0.02
PTPMT1-204ENST00000527079 CHD1O14646 1710 aa14.9□□□□□ -0.02
PTPMT1-204ENST00000527079 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
PTPMT1-204ENST00000527079 USP47Q96K76 1375 aa14.89□□□□□ -0.03
PTPMT1-204ENST00000527079 BCANQ96GW7 911 aa14.89□□□□□ -0.03
PTPMT1-204ENST00000527079 RALGAPBQ86X10 1494 aa14.88□□□□□ -0.03
PTPMT1-204ENST00000527079 KDM5CP41229 1560 aa14.88□□□□□ -0.03
PTPMT1-204ENST00000527079 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTPMT1-204ENST00000527079 MAST1Q9Y2H9 1570 aa14.86□□□□□ -0.03
PTPMT1-204ENST00000527079 BCORL1Q5H9F3 1711 aa14.85□□□□□ -0.03
PTPMT1-204ENST00000527079 MRS2Q9HD23 443 aa14.85□□□□□ -0.03
PTPMT1-204ENST00000527079 ROCK2O75116 1388 aaKnown RBP14.84□□□□□ -0.03
PTPMT1-204ENST00000527079 CCDC184Q52MB2 194 aa14.83□□□□□ -0.03
PTPMT1-204ENST00000527079 FAM135AQ9P2D6 1515 aa14.83□□□□□ -0.04
PTPMT1-204ENST00000527079 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
PTPMT1-204ENST00000527079 ZBED9Q6R2W3 1325 aa14.82□□□□□ -0.04
PTPMT1-204ENST00000527079 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
PTPMT1-204ENST00000527079 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
PTPMT1-204ENST00000527079 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
PTPMT1-204ENST00000527079 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
PTPMT1-204ENST00000527079 MYO5CQ9NQX4 1742 aa14.81□□□□□ -0.04
PTPMT1-204ENST00000527079 UNC13BO14795 1591 aa14.81□□□□□ -0.04
PTPMT1-204ENST00000527079 TTC37Q6PGP7 1564 aa14.81□□□□□ -0.04
PTPMT1-204ENST00000527079 ARHGAP5Q13017 1502 aa14.81□□□□□ -0.04
PTPMT1-204ENST00000527079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTPMT1-204ENST00000527079 SYCP2Q9BX26 1530 aa14.8□□□□□ -0.04
PTPMT1-204ENST00000527079 FAM9BQ8IZU0 186 aa14.8□□□□□ -0.04
PTPMT1-204ENST00000527079 PLXNC1O60486 1568 aa14.79□□□□□ -0.04
PTPMT1-204ENST00000527079 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms