RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.21
LINC01001-201ENST00000526704 ABCC5O15440 1437 aa16.32■□□□□ 0.2
LINC01001-201ENST00000526704 ADGBQ8N7X0 1667 aa16.32■□□□□ 0.2
LINC01001-201ENST00000526704 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
LINC01001-201ENST00000526704 RPRD2Q5VT52 1461 aaKnown RBP16.31■□□□□ 0.2
LINC01001-201ENST00000526704 NEFLP07196 543 aa16.31■□□□□ 0.2
LINC01001-201ENST00000526704 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
LINC01001-201ENST00000526704 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
LINC01001-201ENST00000526704 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
LINC01001-201ENST00000526704 CROCC2H7BZ55 1655 aa16.29■□□□□ 0.2
LINC01001-201ENST00000526704 ANKRD30BQ9BXX2 1392 aa16.29■□□□□ 0.2
LINC01001-201ENST00000526704 FOXD1Q16676 465 aa16.28■□□□□ 0.2
LINC01001-201ENST00000526704 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
LINC01001-201ENST00000526704 ADCY10Q96PN6 1610 aa16.28■□□□□ 0.2
LINC01001-201ENST00000526704 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC01001-201ENST00000526704 NCOA1Q15788 1441 aa16.27■□□□□ 0.2
LINC01001-201ENST00000526704 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
LINC01001-201ENST00000526704 CAMSAP2Q08AD1 1489 aa16.25■□□□□ 0.19
LINC01001-201ENST00000526704 KIF14Q15058 1648 aa16.25■□□□□ 0.19
LINC01001-201ENST00000526704 CEP170Q5SW79 1584 aa16.24■□□□□ 0.19
LINC01001-201ENST00000526704 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
LINC01001-201ENST00000526704 PZPP20742 1482 aa16.23■□□□□ 0.19
LINC01001-201ENST00000526704 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
LINC01001-201ENST00000526704 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
LINC01001-201ENST00000526704 C11orf95C9JLR9 678 aaPredicted RBP16.21■□□□□ 0.19
LINC01001-201ENST00000526704 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
LINC01001-201ENST00000526704 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
LINC01001-201ENST00000526704 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
LINC01001-201ENST00000526704 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
LINC01001-201ENST00000526704 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
LINC01001-201ENST00000526704 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
LINC01001-201ENST00000526704 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
LINC01001-201ENST00000526704 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
LINC01001-201ENST00000526704 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
LINC01001-201ENST00000526704 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
LINC01001-201ENST00000526704 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
LINC01001-201ENST00000526704 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
LINC01001-201ENST00000526704 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
LINC01001-201ENST00000526704 PRKRIP1Q9H875 184 aaPredicted RBP16.15■□□□□ 0.18
LINC01001-201ENST00000526704 BCORL1Q5H9F3 1711 aa16.14■□□□□ 0.17
LINC01001-201ENST00000526704 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
LINC01001-201ENST00000526704 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
LINC01001-201ENST00000526704 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
LINC01001-201ENST00000526704 KDM5CP41229 1560 aa16.11■□□□□ 0.17
LINC01001-201ENST00000526704 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
LINC01001-201ENST00000526704 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
LINC01001-201ENST00000526704 NUP160Q12769 1436 aa16.1■□□□□ 0.17
LINC01001-201ENST00000526704 ABCA8O94911 1581 aa16.1■□□□□ 0.17
LINC01001-201ENST00000526704 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
LINC01001-201ENST00000526704 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
LINC01001-201ENST00000526704 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
LINC01001-201ENST00000526704 CARMIL2Q6F5E8 1435 aa16.07■□□□□ 0.16
LINC01001-201ENST00000526704 ABCC10Q5T3U5 1492 aa16.07■□□□□ 0.16
LINC01001-201ENST00000526704 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
LINC01001-201ENST00000526704 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
LINC01001-201ENST00000526704 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
LINC01001-201ENST00000526704 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
LINC01001-201ENST00000526704 ZNF777Q9ULD5 760 aaPredicted RBP16.05■□□□□ 0.16
LINC01001-201ENST00000526704 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
LINC01001-201ENST00000526704 ANKRD50Q9ULJ7 1429 aa16.05■□□□□ 0.16
LINC01001-201ENST00000526704 KDM5DQ9BY66 1539 aa16.05■□□□□ 0.16
LINC01001-201ENST00000526704 DHX29Q7Z478 1369 aaKnown RBP16.04■□□□□ 0.16
LINC01001-201ENST00000526704 USP47Q96K76 1375 aa16.04■□□□□ 0.16
LINC01001-201ENST00000526704 PKD2Q13563 968 aa16.03■□□□□ 0.16
LINC01001-201ENST00000526704 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.16
LINC01001-201ENST00000526704 RALGAPBQ86X10 1494 aa16.02■□□□□ 0.16
LINC01001-201ENST00000526704 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
LINC01001-201ENST00000526704 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.15
LINC01001-201ENST00000526704 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
LINC01001-201ENST00000526704 ATP10BO94823 1461 aa16.01■□□□□ 0.15
LINC01001-201ENST00000526704 ARHGEF5Q12774 1597 aa16.01■□□□□ 0.15
LINC01001-201ENST00000526704 JPH4Q96JJ6 628 aa16■□□□□ 0.15
LINC01001-201ENST00000526704 BCL11AQ9H165 835 aa16■□□□□ 0.15
LINC01001-201ENST00000526704 FBLN2P98095 1184 aa15.99■□□□□ 0.15
LINC01001-201ENST00000526704 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
LINC01001-201ENST00000526704 E9PCH4 1651 aa15.98■□□□□ 0.15
LINC01001-201ENST00000526704 ZNF326Q5BKZ1 582 aaKnown RBP15.97■□□□□ 0.15
LINC01001-201ENST00000526704 PREX2Q70Z35 1606 aa15.97■□□□□ 0.15
LINC01001-201ENST00000526704 NUP155O75694 1391 aa15.96■□□□□ 0.15
LINC01001-201ENST00000526704 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
LINC01001-201ENST00000526704 PTPRGP23470 1445 aa15.96■□□□□ 0.15
LINC01001-201ENST00000526704 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.15
LINC01001-201ENST00000526704 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
LINC01001-201ENST00000526704 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
LINC01001-201ENST00000526704 KIF15Q9NS87 1388 aa15.93■□□□□ 0.14
LINC01001-201ENST00000526704 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
LINC01001-201ENST00000526704 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
LINC01001-201ENST00000526704 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
LINC01001-201ENST00000526704 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
LINC01001-201ENST00000526704 FAM135AQ9P2D6 1515 aa15.9■□□□□ 0.14
LINC01001-201ENST00000526704 CCDC141Q6ZP82 1450 aa15.9■□□□□ 0.14
LINC01001-201ENST00000526704 MSH5O43196 834 aa15.9■□□□□ 0.14
LINC01001-201ENST00000526704 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.14
LINC01001-201ENST00000526704 UNC13BO14795 1591 aa15.89■□□□□ 0.13
LINC01001-201ENST00000526704 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
LINC01001-201ENST00000526704 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
LINC01001-201ENST00000526704 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
LINC01001-201ENST00000526704 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
LINC01001-201ENST00000526704 CHD1O14646 1710 aa15.87■□□□□ 0.13
LINC01001-201ENST00000526704 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms