RNA–Protein interactions for RNA: ENST00000526702.1

SNX15-205, Transcript of sorting nexin 15, humanhuman

TSL 2

Gene SNX15, Length 4,713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-205ENST00000526702 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
SNX15-205ENST00000526702 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
SNX15-205ENST00000526702 RALBP1Q15311 655 aa16.16■□□□□ 0.18
SNX15-205ENST00000526702 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
SNX15-205ENST00000526702 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
SNX15-205ENST00000526702 ERICH6BQ5W0A0 696 aa16.15■□□□□ 0.18
SNX15-205ENST00000526702 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.18
SNX15-205ENST00000526702 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
SNX15-205ENST00000526702 SPAG9O60271 1321 aaKnown RBP16.12■□□□□ 0.17
SNX15-205ENST00000526702 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
SNX15-205ENST00000526702 UNC13AQ9UPW8 1703 aa16.12■□□□□ 0.17
SNX15-205ENST00000526702 POGKQ9P215 609 aa16.11■□□□□ 0.17
SNX15-205ENST00000526702 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
SNX15-205ENST00000526702 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
SNX15-205ENST00000526702 SENP3-EIF4A1A0A087X0R7 540 aa16.1■□□□□ 0.17
SNX15-205ENST00000526702 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
SNX15-205ENST00000526702 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SNX15-205ENST00000526702 GGT6Q6P531 493 aa16.08■□□□□ 0.17
SNX15-205ENST00000526702 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
SNX15-205ENST00000526702 KIF3BO15066 747 aa16.07■□□□□ 0.16
SNX15-205ENST00000526702 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
SNX15-205ENST00000526702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX15-205ENST00000526702 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
SNX15-205ENST00000526702 EIF3AQ14152 1382 aaKnown RBP16.05■□□□□ 0.16
SNX15-205ENST00000526702 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
SNX15-205ENST00000526702 DDRGK1Q96HY6 314 aa16.04■□□□□ 0.16
SNX15-205ENST00000526702 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
SNX15-205ENST00000526702 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
SNX15-205ENST00000526702 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
SNX15-205ENST00000526702 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
SNX15-205ENST00000526702 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
SNX15-205ENST00000526702 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
SNX15-205ENST00000526702 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
SNX15-205ENST00000526702 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
SNX15-205ENST00000526702 MAP3K1Q13233 1512 aa16.02■□□□□ 0.15
SNX15-205ENST00000526702 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.15
SNX15-205ENST00000526702 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.15
SNX15-205ENST00000526702 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
SNX15-205ENST00000526702 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
SNX15-205ENST00000526702 NEUROD2Q15784 382 aa16.01■□□□□ 0.15
SNX15-205ENST00000526702 PRKRIP1Q9H875 184 aaPredicted RBP16■□□□□ 0.15
SNX15-205ENST00000526702 KIF15Q9NS87 1388 aa16■□□□□ 0.15
SNX15-205ENST00000526702 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
SNX15-205ENST00000526702 HFM1A2PYH4 1435 aa16■□□□□ 0.15
SNX15-205ENST00000526702 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
SNX15-205ENST00000526702 USP47Q96K76 1375 aa15.99■□□□□ 0.15
SNX15-205ENST00000526702 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
SNX15-205ENST00000526702 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
SNX15-205ENST00000526702 MS4A1P11836 297 aa15.98■□□□□ 0.15
SNX15-205ENST00000526702 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
SNX15-205ENST00000526702 CUL7Q14999 1698 aa15.97■□□□□ 0.15
SNX15-205ENST00000526702 SRPK2P78362 688 aaKnown RBP15.97■□□□□ 0.15
SNX15-205ENST00000526702 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
SNX15-205ENST00000526702 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
SNX15-205ENST00000526702 NBR1Q14596 966 aa15.96■□□□□ 0.15
SNX15-205ENST00000526702 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
SNX15-205ENST00000526702 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
SNX15-205ENST00000526702 BECN1Q14457 450 aa15.94■□□□□ 0.14
SNX15-205ENST00000526702 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
SNX15-205ENST00000526702 RCAN3Q9UKA8 241 aa15.94■□□□□ 0.14
SNX15-205ENST00000526702 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
SNX15-205ENST00000526702 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
SNX15-205ENST00000526702 WASHC2CQ9Y4E1 1318 aa15.93■□□□□ 0.14
SNX15-205ENST00000526702 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
SNX15-205ENST00000526702 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
SNX15-205ENST00000526702 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
SNX15-205ENST00000526702 TROQ12816 1431 aaPredicted RBP15.93■□□□□ 0.14
SNX15-205ENST00000526702 FRAT1Q92837 279 aaPredicted RBP15.92■□□□□ 0.14
SNX15-205ENST00000526702 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
SNX15-205ENST00000526702 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
SNX15-205ENST00000526702 HDGFL2Q7Z4V5 671 aaPredicted RBP15.9■□□□□ 0.14
SNX15-205ENST00000526702 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
SNX15-205ENST00000526702 SUPT6HQ7KZ85 1726 aaKnown RBP15.9■□□□□ 0.14
SNX15-205ENST00000526702 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
SNX15-205ENST00000526702 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
SNX15-205ENST00000526702 MLECQ14165 292 aa15.89■□□□□ 0.13
SNX15-205ENST00000526702 ZBED9Q6R2W3 1325 aa15.89■□□□□ 0.13
SNX15-205ENST00000526702 SAFB2Q14151 953 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNX15-205ENST00000526702 RBM19Q9Y4C8 960 aaKnown RBP15.89■□□□□ 0.13
SNX15-205ENST00000526702 STK26Q9P289 416 aa15.88■□□□□ 0.13
SNX15-205ENST00000526702 EPRSP07814 1512 aaKnown RBP15.88■□□□□ 0.13
SNX15-205ENST00000526702 EIF5BO60841 1220 aaKnown RBP15.88■□□□□ 0.13
SNX15-205ENST00000526702 IQGAP2Q13576 1575 aa15.87■□□□□ 0.13
SNX15-205ENST00000526702 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
SNX15-205ENST00000526702 ANP32BQ92688 251 aaKnown RBP15.87■□□□□ 0.13
SNX15-205ENST00000526702 PANK3Q9H999 370 aa15.87■□□□□ 0.13
SNX15-205ENST00000526702 KIF7Q2M1P5 1343 aa15.86■□□□□ 0.13
SNX15-205ENST00000526702 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
SNX15-205ENST00000526702 CNTLNQ9NXG0 1405 aa15.86■□□□□ 0.13
SNX15-205ENST00000526702 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
SNX15-205ENST00000526702 RGS3P49796 1198 aa15.85■□□□□ 0.13
SNX15-205ENST00000526702 NAIPQ13075 1403 aa15.84■□□□□ 0.13
SNX15-205ENST00000526702 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
SNX15-205ENST00000526702 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
SNX15-205ENST00000526702 DAPK1P53355 1430 aa15.83■□□□□ 0.13
SNX15-205ENST00000526702 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.12
SNX15-205ENST00000526702 WASHC2AQ641Q2 1341 aa15.83■□□□□ 0.12
SNX15-205ENST00000526702 TERF2IPQ9NYB0 399 aa15.83■□□□□ 0.12
SNX15-205ENST00000526702 KIAA1107Q9UPP5 1409 aa15.82■□□□□ 0.12
SNX15-205ENST00000526702 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms