RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 TCERG1O14776 1098 aaKnown RBP9.67□□□□□ -0.86
LRRK1-205ENST00000526457 DDX11L8A8MPP1 907 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 PDE4CQ08493 712 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 FHAD1B1AJZ9 1412 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 TNIKQ9UKE5 1360 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 STK11IPQ8N1F8 1099 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 OS9Q13438 667 aaPredicted RBP9.67□□□□□ -0.86
LRRK1-205ENST00000526457 CCDC66A2RUB6 948 aa9.66□□□□□ -0.86
LRRK1-205ENST00000526457 MTERF4Q7Z6M4 381 aaKnown RBP9.66□□□□□ -0.86
LRRK1-205ENST00000526457 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
LRRK1-205ENST00000526457 CDCA8Q53HL2 280 aa9.66□□□□□ -0.86
LRRK1-205ENST00000526457 CFAP44Q96MT7 982 aa9.66□□□□□ -0.86
LRRK1-205ENST00000526457 KAT6BQ8WYB5 2073 aa9.66□□□□□ -0.86
LRRK1-205ENST00000526457 CSPP1Q1MSJ5 1256 aa9.65□□□□□ -0.86
LRRK1-205ENST00000526457 MTUS2Q5JR59 1369 aa9.65□□□□□ -0.86
LRRK1-205ENST00000526457 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
LRRK1-205ENST00000526457 RDXP35241 583 aaKnown RBP9.65□□□□□ -0.87
LRRK1-205ENST00000526457 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.87
LRRK1-205ENST00000526457 PRM3Q9NNZ6 103 aa9.64□□□□□ -0.87
LRRK1-205ENST00000526457 CCDC70Q6NSX1 233 aa9.63□□□□□ -0.87
LRRK1-205ENST00000526457 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
LRRK1-205ENST00000526457 FAM43AQ8N2R8 423 aa9.63□□□□□ -0.87
LRRK1-205ENST00000526457 MEX3CQ5U5Q3 659 aaKnown RBP9.63□□□□□ -0.87
LRRK1-205ENST00000526457 ZNF592Q92610 1267 aa9.63□□□□□ -0.87
LRRK1-205ENST00000526457 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
LRRK1-205ENST00000526457 CCDC191Q8NCU4 936 aa9.62□□□□□ -0.87
LRRK1-205ENST00000526457 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
LRRK1-205ENST00000526457 A0A0G2JS52 829 aa9.62□□□□□ -0.87
LRRK1-205ENST00000526457 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 KNSTRNQ9Y448 316 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 TPM2P07951 284 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
LRRK1-205ENST00000526457 H0YHG0 523 aa9.59□□□□□ -0.87
LRRK1-205ENST00000526457 MAPK8IP2Q13387 824 aaPredicted RBP9.59□□□□□ -0.87
LRRK1-205ENST00000526457 CCDC34Q96HJ3 373 aa9.59□□□□□ -0.87
LRRK1-205ENST00000526457 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
LRRK1-205ENST00000526457 KIF16BQ96L93 1317 aa9.58□□□□□ -0.88
LRRK1-205ENST00000526457 AK7Q96M32 723 aa9.58□□□□□ -0.88
LRRK1-205ENST00000526457 HMMRO75330 724 aa9.57□□□□□ -0.88
LRRK1-205ENST00000526457 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
LRRK1-205ENST00000526457 MFAP1P55081 439 aaKnown RBP9.57□□□□□ -0.88
LRRK1-205ENST00000526457 SKOR2Q2VWA4 1001 aaPredicted RBP9.57□□□□□ -0.88
LRRK1-205ENST00000526457 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
LRRK1-205ENST00000526457 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
LRRK1-205ENST00000526457 PLCD4Q9BRC7 762 aa9.57□□□□□ -0.88
LRRK1-205ENST00000526457 ARGLU1Q9NWB6 273 aaPredicted RBP9.57□□□□□ -0.88
LRRK1-205ENST00000526457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.88
LRRK1-205ENST00000526457 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
LRRK1-205ENST00000526457 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
LRRK1-205ENST00000526457 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
LRRK1-205ENST00000526457 CREBRFQ8IUR6 639 aa9.56□□□□□ -0.88
LRRK1-205ENST00000526457 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
LRRK1-205ENST00000526457 CEP89Q96ST8 783 aa9.56□□□□□ -0.88
LRRK1-205ENST00000526457 ESF1Q9H501 851 aaKnown RBP9.55□□□□□ -0.88
LRRK1-205ENST00000526457 GOLGA6L19H0YKK7 550 aa9.55□□□□□ -0.88
LRRK1-205ENST00000526457 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
LRRK1-205ENST00000526457 RRP9O43818 475 aaKnown RBP9.55□□□□□ -0.88
LRRK1-205ENST00000526457 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
LRRK1-205ENST00000526457 ZNF526Q8TF50 670 aaPredicted RBP9.55□□□□□ -0.88
LRRK1-205ENST00000526457 HSP90B2PQ58FF3 399 aa9.55□□□□□ -0.88
LRRK1-205ENST00000526457 RUFY1Q96T51 708 aa9.55□□□□□ -0.88
LRRK1-205ENST00000526457 FOXD4L5Q5VV16 416 aaPredicted RBP9.54□□□□□ -0.88
LRRK1-205ENST00000526457 FOXD4L4Q8WXT5 416 aaPredicted RBP9.54□□□□□ -0.88
LRRK1-205ENST00000526457 DDX49Q9Y6V7 483 aaKnown RBP9.54□□□□□ -0.88
LRRK1-205ENST00000526457 TSPY4P0CV99 314 aa9.54□□□□□ -0.88
LRRK1-205ENST00000526457 TSPY10P0CW01 314 aa9.54□□□□□ -0.88
LRRK1-205ENST00000526457 R3HCC1Q9Y3T6 440 aaKnown RBP9.54□□□□□ -0.88
LRRK1-205ENST00000526457 NEFHP12036 1026 aa9.54□□□□□ -0.88
LRRK1-205ENST00000526457 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
LRRK1-205ENST00000526457 BAZ1BQ9UIG0 1483 aaKnown RBP9.53□□□□□ -0.88
LRRK1-205ENST00000526457 TPM1P09493 284 aa9.53□□□□□ -0.88
LRRK1-205ENST00000526457 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
LRRK1-205ENST00000526457 HOMER1Q86YM7 354 aa9.53□□□□□ -0.88
LRRK1-205ENST00000526457 DEF6Q9H4E7 631 aa9.53□□□□□ -0.88
LRRK1-205ENST00000526457 FBXO3Q9UK99 471 aa9.52□□□□□ -0.88
LRRK1-205ENST00000526457 RCAN3Q9UKA8 241 aa9.52□□□□□ -0.88
LRRK1-205ENST00000526457 CCNB3Q8WWL7 1395 aa9.52□□□□□ -0.89
LRRK1-205ENST00000526457 RWDD1Q9H446 243 aaPredicted RBP9.51□□□□□ -0.89
LRRK1-205ENST00000526457 DIAPH3Q9NSV4 1193 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 TSPYL1Q9H0U9 437 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 APBB1O00213 710 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 CDR1P51861 262 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 LEKR1Q6ZMV7 388 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 BECN2A8MW95 431 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 DYDC1Q8WWB3 177 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 BRPF3Q9ULD4 1205 aa9.51□□□□□ -0.89
LRRK1-205ENST00000526457 PES1O00541 588 aaKnown RBP9.5□□□□□ -0.89
LRRK1-205ENST00000526457 ST18O60284 1047 aa9.5□□□□□ -0.89
LRRK1-205ENST00000526457 MNS1Q8NEH6 495 aa9.5□□□□□ -0.89
LRRK1-205ENST00000526457 ISY1Q9ULR0 285 aaKnown RBP9.5□□□□□ -0.89
LRRK1-205ENST00000526457 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
LRRK1-205ENST00000526457 RBM10P98175 930 aaKnown RBP9.5□□□□□ -0.89
LRRK1-205ENST00000526457 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
LRRK1-205ENST00000526457 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
LRRK1-205ENST00000526457 NOL8Q76FK4 1167 aaKnown RBP9.49□□□□□ -0.89
LRRK1-205ENST00000526457 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
LRRK1-205ENST00000526457 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms