RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-208ENST00000526369 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
PPFIA1-208ENST00000526369 RIMS1Q86UR5 1692 aaKnown RBP16.1■□□□□ 0.17
PPFIA1-208ENST00000526369 SCAPERQ9BY12 1400 aa16.09■□□□□ 0.17
PPFIA1-208ENST00000526369 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-208ENST00000526369 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
PPFIA1-208ENST00000526369 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
PPFIA1-208ENST00000526369 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-208ENST00000526369 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
PPFIA1-208ENST00000526369 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
PPFIA1-208ENST00000526369 MYT1LQ9UL68 1186 aa16.06■□□□□ 0.16
PPFIA1-208ENST00000526369 TIAM1Q13009 1591 aa16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 PLCH2O75038 1416 aa16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 CEBPAP49715 358 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
PPFIA1-208ENST00000526369 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
PPFIA1-208ENST00000526369 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
PPFIA1-208ENST00000526369 CERKQ8TCT0 537 aa16.02■□□□□ 0.16
PPFIA1-208ENST00000526369 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
PPFIA1-208ENST00000526369 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
PPFIA1-208ENST00000526369 ATP10AO60312 1499 aa16■□□□□ 0.15
PPFIA1-208ENST00000526369 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
PPFIA1-208ENST00000526369 AFAP1Q8N556 730 aa16■□□□□ 0.15
PPFIA1-208ENST00000526369 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
PPFIA1-208ENST00000526369 C9orf84Q5VXU9 1444 aa15.97■□□□□ 0.15
PPFIA1-208ENST00000526369 PPARGC1BQ86YN6 1023 aaKnown RBP15.97■□□□□ 0.15
PPFIA1-208ENST00000526369 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
PPFIA1-208ENST00000526369 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
PPFIA1-208ENST00000526369 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
PPFIA1-208ENST00000526369 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
PPFIA1-208ENST00000526369 LRRC9Q6ZRR7 1453 aa15.92■□□□□ 0.14
PPFIA1-208ENST00000526369 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
PPFIA1-208ENST00000526369 TROQ12816 1431 aaPredicted RBP15.92■□□□□ 0.14
PPFIA1-208ENST00000526369 KIF14Q15058 1648 aa15.91■□□□□ 0.14
PPFIA1-208ENST00000526369 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
PPFIA1-208ENST00000526369 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
PPFIA1-208ENST00000526369 LRRIQ1Q96JM4 1722 aa15.89■□□□□ 0.13
PPFIA1-208ENST00000526369 UHRF1BP1Q6BDS2 1440 aa15.88■□□□□ 0.13
PPFIA1-208ENST00000526369 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
PPFIA1-208ENST00000526369 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
PPFIA1-208ENST00000526369 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
PPFIA1-208ENST00000526369 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
PPFIA1-208ENST00000526369 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
PPFIA1-208ENST00000526369 DISP3Q9P2K9 1392 aa15.83■□□□□ 0.12
PPFIA1-208ENST00000526369 KDM5CP41229 1560 aa15.83■□□□□ 0.12
PPFIA1-208ENST00000526369 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.12
PPFIA1-208ENST00000526369 DIP2CQ9Y2E4 1556 aa15.82■□□□□ 0.12
PPFIA1-208ENST00000526369 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
PPFIA1-208ENST00000526369 MLH3Q9UHC1 1453 aa15.81■□□□□ 0.12
PPFIA1-208ENST00000526369 ILDR2Q71H61 639 aa15.79■□□□□ 0.12
PPFIA1-208ENST00000526369 RRBP1Q9P2E9 1410 aaKnown RBP15.78■□□□□ 0.12
PPFIA1-208ENST00000526369 HNRNPMP52272 730 aaKnown RBP eCLIP15.78■□□□□ 0.12
PPFIA1-208ENST00000526369 ABCA6Q8N139 1617 aa15.78■□□□□ 0.12
PPFIA1-208ENST00000526369 STRCQ7RTU9 1775 aa15.77■□□□□ 0.11
PPFIA1-208ENST00000526369 ABCC1P33527 1531 aa15.76■□□□□ 0.11
PPFIA1-208ENST00000526369 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
PPFIA1-208ENST00000526369 PTPRTO14522 1441 aa15.76■□□□□ 0.11
PPFIA1-208ENST00000526369 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
PPFIA1-208ENST00000526369 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
PPFIA1-208ENST00000526369 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
PPFIA1-208ENST00000526369 AGLP35573 1532 aa15.74■□□□□ 0.11
PPFIA1-208ENST00000526369 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
PPFIA1-208ENST00000526369 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
PPFIA1-208ENST00000526369 PREX2Q70Z35 1606 aa15.73■□□□□ 0.11
PPFIA1-208ENST00000526369 C3P01024 1663 aa15.73■□□□□ 0.11
PPFIA1-208ENST00000526369 CNTLNQ9NXG0 1405 aa15.72■□□□□ 0.11
PPFIA1-208ENST00000526369 CFDP1Q9UEE9 299 aaPredicted RBP15.72■□□□□ 0.11
PPFIA1-208ENST00000526369 ZMYM3Q14202 1370 aa15.72■□□□□ 0.11
PPFIA1-208ENST00000526369 GGT6Q6P531 493 aa15.71■□□□□ 0.11
PPFIA1-208ENST00000526369 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
PPFIA1-208ENST00000526369 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
PPFIA1-208ENST00000526369 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
PPFIA1-208ENST00000526369 SOCS7O14512 581 aa15.69■□□□□ 0.1
PPFIA1-208ENST00000526369 SAMD9LQ8IVG5 1584 aa15.69■□□□□ 0.1
PPFIA1-208ENST00000526369 KIDINS220Q9ULH0 1771 aa15.69■□□□□ 0.1
PPFIA1-208ENST00000526369 SETD1BQ9UPS6 1966 aaKnown RBP15.69■□□□□ 0.1
PPFIA1-208ENST00000526369 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
PPFIA1-208ENST00000526369 SYCP2Q9BX26 1530 aa15.68■□□□□ 0.1
PPFIA1-208ENST00000526369 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
PPFIA1-208ENST00000526369 ZNF335Q9H4Z2 1342 aaPredicted RBP15.67■□□□□ 0.1
PPFIA1-208ENST00000526369 CAMSAP1Q5T5Y3 1602 aa15.66■□□□□ 0.1
PPFIA1-208ENST00000526369 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
PPFIA1-208ENST00000526369 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
PPFIA1-208ENST00000526369 NPATQ14207 1427 aa15.65■□□□□ 0.1
PPFIA1-208ENST00000526369 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
PPFIA1-208ENST00000526369 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
PPFIA1-208ENST00000526369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.09
PPFIA1-208ENST00000526369 PTPN23Q9H3S7 1636 aa15.64■□□□□ 0.09
PPFIA1-208ENST00000526369 A2MP01023 1474 aa15.63■□□□□ 0.09
PPFIA1-208ENST00000526369 ATP7AQ04656 1500 aa15.62■□□□□ 0.09
PPFIA1-208ENST00000526369 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
PPFIA1-208ENST00000526369 KIAA1107Q9UPP5 1409 aa15.61■□□□□ 0.09
PPFIA1-208ENST00000526369 PKD2Q13563 968 aa15.61■□□□□ 0.09
PPFIA1-208ENST00000526369 PTPRKQ15262 1439 aa15.6■□□□□ 0.09
PPFIA1-208ENST00000526369 PLEKHH2Q8IVE3 1493 aa15.6■□□□□ 0.09
PPFIA1-208ENST00000526369 SPATA31D1Q6ZQQ2 1576 aa15.6■□□□□ 0.09
PPFIA1-208ENST00000526369 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
PPFIA1-208ENST00000526369 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms