RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
KDM2A-204ENST00000524657 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
KDM2A-204ENST00000524657 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
KDM2A-204ENST00000524657 MS4A1P11836 297 aa12.84□□□□□ -0.35
KDM2A-204ENST00000524657 TOP2BQ02880 1626 aa12.83□□□□□ -0.35
KDM2A-204ENST00000524657 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
KDM2A-204ENST00000524657 CRBNQ96SW2 442 aa12.83□□□□□ -0.36
KDM2A-204ENST00000524657 RRAGDQ9NQL2 400 aaPredicted RBP12.83□□□□□ -0.36
KDM2A-204ENST00000524657 POGKQ9P215 609 aa12.83□□□□□ -0.36
KDM2A-204ENST00000524657 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
KDM2A-204ENST00000524657 MPHOSPH9Q99550 1183 aa12.82□□□□□ -0.36
KDM2A-204ENST00000524657 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
KDM2A-204ENST00000524657 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
KDM2A-204ENST00000524657 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
KDM2A-204ENST00000524657 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
KDM2A-204ENST00000524657 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
KDM2A-204ENST00000524657 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
KDM2A-204ENST00000524657 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
KDM2A-204ENST00000524657 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
KDM2A-204ENST00000524657 NAIPQ13075 1403 aa12.78□□□□□ -0.36
KDM2A-204ENST00000524657 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
KDM2A-204ENST00000524657 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.36
KDM2A-204ENST00000524657 HFM1A2PYH4 1435 aa12.77□□□□□ -0.36
KDM2A-204ENST00000524657 IGF1RP08069 1367 aa12.77□□□□□ -0.36
KDM2A-204ENST00000524657 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.36
KDM2A-204ENST00000524657 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
KDM2A-204ENST00000524657 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
KDM2A-204ENST00000524657 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
KDM2A-204ENST00000524657 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
KDM2A-204ENST00000524657 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
KDM2A-204ENST00000524657 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
KDM2A-204ENST00000524657 CUX1P39880 1505 aa12.73□□□□□ -0.37
KDM2A-204ENST00000524657 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
KDM2A-204ENST00000524657 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
KDM2A-204ENST00000524657 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
KDM2A-204ENST00000524657 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
KDM2A-204ENST00000524657 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
KDM2A-204ENST00000524657 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.37
KDM2A-204ENST00000524657 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.38
KDM2A-204ENST00000524657 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
KDM2A-204ENST00000524657 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
KDM2A-204ENST00000524657 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
KDM2A-204ENST00000524657 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
KDM2A-204ENST00000524657 USP47Q96K76 1375 aa12.67□□□□□ -0.38
KDM2A-204ENST00000524657 CARD11Q9BXL7 1154 aa12.66□□□□□ -0.38
KDM2A-204ENST00000524657 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
KDM2A-204ENST00000524657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.38
KDM2A-204ENST00000524657 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.39
KDM2A-204ENST00000524657 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
KDM2A-204ENST00000524657 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
KDM2A-204ENST00000524657 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
KDM2A-204ENST00000524657 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
KDM2A-204ENST00000524657 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
KDM2A-204ENST00000524657 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
KDM2A-204ENST00000524657 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
KDM2A-204ENST00000524657 CFTRP13569 1480 aa12.63□□□□□ -0.39
KDM2A-204ENST00000524657 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
KDM2A-204ENST00000524657 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
KDM2A-204ENST00000524657 ARID3AQ99856 593 aa12.63□□□□□ -0.39
KDM2A-204ENST00000524657 SEC24BO95487 1268 aa12.62□□□□□ -0.39
KDM2A-204ENST00000524657 MYOM3Q5VTT5 1437 aa12.61□□□□□ -0.39
KDM2A-204ENST00000524657 SPATA31E1Q6ZUB1 1445 aa12.61□□□□□ -0.39
KDM2A-204ENST00000524657 RRP9O43818 475 aaKnown RBP12.6□□□□□ -0.39
KDM2A-204ENST00000524657 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
KDM2A-204ENST00000524657 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
KDM2A-204ENST00000524657 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
KDM2A-204ENST00000524657 BECN1Q14457 450 aa12.6□□□□□ -0.39
KDM2A-204ENST00000524657 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
KDM2A-204ENST00000524657 RALBP1Q15311 655 aa12.59□□□□□ -0.39
KDM2A-204ENST00000524657 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
KDM2A-204ENST00000524657 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
KDM2A-204ENST00000524657 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
KDM2A-204ENST00000524657 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
KDM2A-204ENST00000524657 FYCO1Q9BQS8 1478 aa12.57□□□□□ -0.4
KDM2A-204ENST00000524657 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
KDM2A-204ENST00000524657 KDM6BO15054 1643 aa12.57□□□□□ -0.4
KDM2A-204ENST00000524657 CLCN1P35523 988 aa12.56□□□□□ -0.4
KDM2A-204ENST00000524657 ZNF644Q9H582 1327 aaPredicted RBP12.55□□□□□ -0.4
KDM2A-204ENST00000524657 FGD5Q6ZNL6 1462 aa12.54□□□□□ -0.4
KDM2A-204ENST00000524657 PKD2Q13563 968 aa12.54□□□□□ -0.4
KDM2A-204ENST00000524657 TRIM44Q96DX7 344 aaPredicted RBP12.54□□□□□ -0.4
KDM2A-204ENST00000524657 MYH16Q9H6N6 1097 aa12.54□□□□□ -0.4
KDM2A-204ENST00000524657 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
KDM2A-204ENST00000524657 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
KDM2A-204ENST00000524657 ZNF777Q9ULD5 760 aaPredicted RBP12.53□□□□□ -0.4
KDM2A-204ENST00000524657 ADAMTS8Q9UP79 889 aa12.52□□□□□ -0.4
KDM2A-204ENST00000524657 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
KDM2A-204ENST00000524657 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
KDM2A-204ENST00000524657 ESPNB1AK53 854 aa12.52□□□□□ -0.41
KDM2A-204ENST00000524657 IGHDP01880 384 aa12.52□□□□□ -0.41
KDM2A-204ENST00000524657 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.52□□□□□ -0.41
KDM2A-204ENST00000524657 TEX14Q8IWB6 1497 aa12.51□□□□□ -0.41
KDM2A-204ENST00000524657 BCAR3O75815 825 aa12.51□□□□□ -0.41
KDM2A-204ENST00000524657 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
KDM2A-204ENST00000524657 USP19O94966 1318 aa12.51□□□□□ -0.41
KDM2A-204ENST00000524657 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
KDM2A-204ENST00000524657 ERBB4Q15303 1308 aa12.5□□□□□ -0.41
KDM2A-204ENST00000524657 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
KDM2A-204ENST00000524657 TRAK2O60296 914 aa12.5□□□□□ -0.41
KDM2A-204ENST00000524657 BCORL1Q5H9F3 1711 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms