RNA–Protein interactions for RNA: ENST00000524039.5

GSDMB-215, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 1,100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-215ENST00000524039 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
GSDMB-215ENST00000524039 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
GSDMB-215ENST00000524039 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
GSDMB-215ENST00000524039 PTPRTO14522 1441 aa13.37□□□□□ -0.27
GSDMB-215ENST00000524039 MAGI2Q86UL8 1455 aa13.36□□□□□ -0.27
GSDMB-215ENST00000524039 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
GSDMB-215ENST00000524039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.34□□□□□ -0.27
GSDMB-215ENST00000524039 PLEKHD1A6NEE1 506 aa13.33□□□□□ -0.28
GSDMB-215ENST00000524039 ATP10AO60312 1499 aa13.32□□□□□ -0.28
GSDMB-215ENST00000524039 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
GSDMB-215ENST00000524039 C3P01024 1663 aa13.31□□□□□ -0.28
GSDMB-215ENST00000524039 NUP153P49790 1475 aaKnown RBP13.31□□□□□ -0.28
GSDMB-215ENST00000524039 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
GSDMB-215ENST00000524039 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
GSDMB-215ENST00000524039 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
GSDMB-215ENST00000524039 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
GSDMB-215ENST00000524039 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
GSDMB-215ENST00000524039 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
GSDMB-215ENST00000524039 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
GSDMB-215ENST00000524039 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
GSDMB-215ENST00000524039 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
GSDMB-215ENST00000524039 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
GSDMB-215ENST00000524039 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
GSDMB-215ENST00000524039 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
GSDMB-215ENST00000524039 SUPT6HQ7KZ85 1726 aaKnown RBP13.22□□□□□ -0.29
GSDMB-215ENST00000524039 PLCH2O75038 1416 aa13.22□□□□□ -0.29
GSDMB-215ENST00000524039 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
GSDMB-215ENST00000524039 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
GSDMB-215ENST00000524039 NCKAP5LQ9HCH0 1330 aa13.19□□□□□ -0.3
GSDMB-215ENST00000524039 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
GSDMB-215ENST00000524039 HSPA1LP34931 641 aa13.18□□□□□ -0.3
GSDMB-215ENST00000524039 EFCAB2Q5VUJ9 269 aa13.18□□□□□ -0.3
GSDMB-215ENST00000524039 PHF23Q9BUL5 403 aaPredicted RBP13.18□□□□□ -0.3
GSDMB-215ENST00000524039 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
GSDMB-215ENST00000524039 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
GSDMB-215ENST00000524039 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
GSDMB-215ENST00000524039 AFAP1Q8N556 730 aa13.17□□□□□ -0.3
GSDMB-215ENST00000524039 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
GSDMB-215ENST00000524039 KDM5CP41229 1560 aa13.15□□□□□ -0.3
GSDMB-215ENST00000524039 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
GSDMB-215ENST00000524039 AGLP35573 1532 aa13.13□□□□□ -0.31
GSDMB-215ENST00000524039 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
GSDMB-215ENST00000524039 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
GSDMB-215ENST00000524039 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
GSDMB-215ENST00000524039 KIF14Q15058 1648 aa13.1□□□□□ -0.31
GSDMB-215ENST00000524039 TOM1O60784 492 aa13.1□□□□□ -0.31
GSDMB-215ENST00000524039 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
GSDMB-215ENST00000524039 ZNF142P52746 1687 aaPredicted RBP13.09□□□□□ -0.31
GSDMB-215ENST00000524039 PKD2Q13563 968 aa13.09□□□□□ -0.31
GSDMB-215ENST00000524039 MYO3AQ8NEV4 1616 aa13.09□□□□□ -0.31
GSDMB-215ENST00000524039 NPATQ14207 1427 aa13.08□□□□□ -0.32
GSDMB-215ENST00000524039 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
GSDMB-215ENST00000524039 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
GSDMB-215ENST00000524039 CDC42BPBQ9Y5S2 1711 aa13.08□□□□□ -0.32
GSDMB-215ENST00000524039 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
GSDMB-215ENST00000524039 CLTCQ00610 1675 aaKnown RBP13.07□□□□□ -0.32
GSDMB-215ENST00000524039 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
GSDMB-215ENST00000524039 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
GSDMB-215ENST00000524039 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
GSDMB-215ENST00000524039 CEP170BQ9Y4F5 1589 aaPredicted RBP13.06□□□□□ -0.32
GSDMB-215ENST00000524039 ZMYM3Q14202 1370 aa13.06□□□□□ -0.32
GSDMB-215ENST00000524039 ITSN2Q9NZM3 1697 aa13.05□□□□□ -0.32
GSDMB-215ENST00000524039 TCOF1Q13428 1488 aaKnown RBP13.05□□□□□ -0.32
GSDMB-215ENST00000524039 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
GSDMB-215ENST00000524039 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
GSDMB-215ENST00000524039 CPS1P31327 1500 aa13.02□□□□□ -0.33
GSDMB-215ENST00000524039 PREX2Q70Z35 1606 aa13□□□□□ -0.33
GSDMB-215ENST00000524039 ABCC1P33527 1531 aa13□□□□□ -0.33
GSDMB-215ENST00000524039 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
GSDMB-215ENST00000524039 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
GSDMB-215ENST00000524039 CLIP1P30622 1438 aa12.98□□□□□ -0.33
GSDMB-215ENST00000524039 TROQ12816 1431 aaPredicted RBP12.98□□□□□ -0.33
GSDMB-215ENST00000524039 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
GSDMB-215ENST00000524039 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
GSDMB-215ENST00000524039 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
GSDMB-215ENST00000524039 NEURL4Q96JN8 1562 aa12.95□□□□□ -0.34
GSDMB-215ENST00000524039 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
GSDMB-215ENST00000524039 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
GSDMB-215ENST00000524039 A2ML1A8K2U0 1454 aa12.95□□□□□ -0.34
GSDMB-215ENST00000524039 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
GSDMB-215ENST00000524039 GGT6Q6P531 493 aa12.94□□□□□ -0.34
GSDMB-215ENST00000524039 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
GSDMB-215ENST00000524039 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
GSDMB-215ENST00000524039 SPAG9O60271 1321 aaKnown RBP12.91□□□□□ -0.34
GSDMB-215ENST00000524039 ZNF777Q9ULD5 760 aaPredicted RBP12.91□□□□□ -0.34
GSDMB-215ENST00000524039 STRCP1A6NGW2 1772 aa12.9□□□□□ -0.34
GSDMB-215ENST00000524039 SETD1AO15047 1707 aaKnown RBP12.9□□□□□ -0.34
GSDMB-215ENST00000524039 ATP7AQ04656 1500 aa12.89□□□□□ -0.35
GSDMB-215ENST00000524039 A2MP01023 1474 aa12.89□□□□□ -0.35
GSDMB-215ENST00000524039 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
GSDMB-215ENST00000524039 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
GSDMB-215ENST00000524039 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
GSDMB-215ENST00000524039 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
GSDMB-215ENST00000524039 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
GSDMB-215ENST00000524039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
GSDMB-215ENST00000524039 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.35
GSDMB-215ENST00000524039 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
GSDMB-215ENST00000524039 EEA1Q15075 1411 aa12.87□□□□□ -0.35
GSDMB-215ENST00000524039 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
GSDMB-215ENST00000524039 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms