RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
PCDHGB1-201ENST00000523390 ZBTB7CA1YPR0 619 aa17.34■□□□□ 0.37
PCDHGB1-201ENST00000523390 ZNF644Q9H582 1327 aaPredicted RBP17.33■□□□□ 0.37
PCDHGB1-201ENST00000523390 NEUROD2Q15784 382 aa17.33■□□□□ 0.37
PCDHGB1-201ENST00000523390 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.37
PCDHGB1-201ENST00000523390 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.36
PCDHGB1-201ENST00000523390 CFAP53Q96M91 514 aa17.33■□□□□ 0.36
PCDHGB1-201ENST00000523390 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
PCDHGB1-201ENST00000523390 LRRC9Q6ZRR7 1453 aa17.29■□□□□ 0.36
PCDHGB1-201ENST00000523390 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
PCDHGB1-201ENST00000523390 STK26Q9P289 416 aa17.28■□□□□ 0.36
PCDHGB1-201ENST00000523390 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
PCDHGB1-201ENST00000523390 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.35
PCDHGB1-201ENST00000523390 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
PCDHGB1-201ENST00000523390 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
PCDHGB1-201ENST00000523390 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
PCDHGB1-201ENST00000523390 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
PCDHGB1-201ENST00000523390 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
PCDHGB1-201ENST00000523390 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
PCDHGB1-201ENST00000523390 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
PCDHGB1-201ENST00000523390 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
PCDHGB1-201ENST00000523390 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
PCDHGB1-201ENST00000523390 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.34
PCDHGB1-201ENST00000523390 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
PCDHGB1-201ENST00000523390 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
PCDHGB1-201ENST00000523390 NCOA2Q15596 1464 aa17.2■□□□□ 0.34
PCDHGB1-201ENST00000523390 DNMBPQ6XZF7 1577 aa17.2■□□□□ 0.34
PCDHGB1-201ENST00000523390 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
PCDHGB1-201ENST00000523390 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
PCDHGB1-201ENST00000523390 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
PCDHGB1-201ENST00000523390 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
PCDHGB1-201ENST00000523390 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
PCDHGB1-201ENST00000523390 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
PCDHGB1-201ENST00000523390 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
PCDHGB1-201ENST00000523390 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
PCDHGB1-201ENST00000523390 SOX12O15370 315 aa17.15■□□□□ 0.34
PCDHGB1-201ENST00000523390 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
PCDHGB1-201ENST00000523390 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
PCDHGB1-201ENST00000523390 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
PCDHGB1-201ENST00000523390 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
PCDHGB1-201ENST00000523390 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
PCDHGB1-201ENST00000523390 KTN1Q86UP2 1357 aaKnown RBP17.14■□□□□ 0.33
PCDHGB1-201ENST00000523390 A0A0G2JS52 829 aa17.13■□□□□ 0.33
PCDHGB1-201ENST00000523390 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
PCDHGB1-201ENST00000523390 PRG4Q92954 1404 aaPredicted RBP17.12■□□□□ 0.33
PCDHGB1-201ENST00000523390 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
PCDHGB1-201ENST00000523390 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
PCDHGB1-201ENST00000523390 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
PCDHGB1-201ENST00000523390 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
PCDHGB1-201ENST00000523390 RRBP1Q9P2E9 1410 aaKnown RBP17.1■□□□□ 0.33
PCDHGB1-201ENST00000523390 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
PCDHGB1-201ENST00000523390 EFCAB5A4FU69 1503 aa17.09■□□□□ 0.33
PCDHGB1-201ENST00000523390 PPP4R2Q9NY27 417 aa17.08■□□□□ 0.32
PCDHGB1-201ENST00000523390 UACAQ9BZF9 1416 aa17.08■□□□□ 0.32
PCDHGB1-201ENST00000523390 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
PCDHGB1-201ENST00000523390 TRAK1Q9UPV9 953 aa17.08■□□□□ 0.32
PCDHGB1-201ENST00000523390 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
PCDHGB1-201ENST00000523390 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
PCDHGB1-201ENST00000523390 RALBP1Q15311 655 aa17.06■□□□□ 0.32
PCDHGB1-201ENST00000523390 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
PCDHGB1-201ENST00000523390 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
PCDHGB1-201ENST00000523390 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
PCDHGB1-201ENST00000523390 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
PCDHGB1-201ENST00000523390 USP47Q96K76 1375 aa17.03■□□□□ 0.32
PCDHGB1-201ENST00000523390 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
PCDHGB1-201ENST00000523390 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
PCDHGB1-201ENST00000523390 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
PCDHGB1-201ENST00000523390 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
PCDHGB1-201ENST00000523390 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
PCDHGB1-201ENST00000523390 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
PCDHGB1-201ENST00000523390 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
PCDHGB1-201ENST00000523390 NBR1Q14596 966 aa17■□□□□ 0.31
PCDHGB1-201ENST00000523390 RGS3P49796 1198 aa16.99■□□□□ 0.31
PCDHGB1-201ENST00000523390 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
PCDHGB1-201ENST00000523390 PANK3Q9H999 370 aa16.98■□□□□ 0.31
PCDHGB1-201ENST00000523390 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
PCDHGB1-201ENST00000523390 TROQ12816 1431 aaPredicted RBP16.98■□□□□ 0.31
PCDHGB1-201ENST00000523390 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
PCDHGB1-201ENST00000523390 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
PCDHGB1-201ENST00000523390 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
PCDHGB1-201ENST00000523390 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.31
PCDHGB1-201ENST00000523390 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.31
PCDHGB1-201ENST00000523390 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
PCDHGB1-201ENST00000523390 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
PCDHGB1-201ENST00000523390 VGFO15240 615 aaPredicted RBP16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
PCDHGB1-201ENST00000523390 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
PCDHGB1-201ENST00000523390 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
PCDHGB1-201ENST00000523390 ARXQ96QS3 562 aa16.91■□□□□ 0.3
PCDHGB1-201ENST00000523390 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
PCDHGB1-201ENST00000523390 PCF11O94913 1555 aaKnown RBP16.91■□□□□ 0.3
PCDHGB1-201ENST00000523390 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
PCDHGB1-201ENST00000523390 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
PCDHGB1-201ENST00000523390 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
PCDHGB1-201ENST00000523390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms