RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 ARHGEF12Q9NZN5 1544 aa15.9■□□□□ 0.14
VIRMA-208ENST00000523263 MLECQ14165 292 aa15.9■□□□□ 0.14
VIRMA-208ENST00000523263 EFCAB2Q5VUJ9 269 aa15.9■□□□□ 0.14
VIRMA-208ENST00000523263 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
VIRMA-208ENST00000523263 RANGAP1P46060 587 aaPredicted RBP15.89■□□□□ 0.13
VIRMA-208ENST00000523263 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
VIRMA-208ENST00000523263 SIGLEC1Q9BZZ2 1709 aa15.88■□□□□ 0.13
VIRMA-208ENST00000523263 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
VIRMA-208ENST00000523263 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
VIRMA-208ENST00000523263 ZNF518AQ6AHZ1 1483 aa15.83■□□□□ 0.12
VIRMA-208ENST00000523263 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
VIRMA-208ENST00000523263 CEBPAP49715 358 aaPredicted RBP15.82■□□□□ 0.12
VIRMA-208ENST00000523263 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
VIRMA-208ENST00000523263 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
VIRMA-208ENST00000523263 PREX1Q8TCU6 1659 aa15.8■□□□□ 0.12
VIRMA-208ENST00000523263 PTPRTO14522 1441 aa15.8■□□□□ 0.12
VIRMA-208ENST00000523263 AFAP1Q8N556 730 aa15.79■□□□□ 0.12
VIRMA-208ENST00000523263 KDM5CP41229 1560 aa15.79■□□□□ 0.12
VIRMA-208ENST00000523263 SOCS7O14512 581 aa15.78■□□□□ 0.12
VIRMA-208ENST00000523263 REREQ9P2R6 1566 aa15.78■□□□□ 0.12
VIRMA-208ENST00000523263 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
VIRMA-208ENST00000523263 MLH3Q9UHC1 1453 aa15.77■□□□□ 0.11
VIRMA-208ENST00000523263 DISP3Q9P2K9 1392 aa15.76■□□□□ 0.11
VIRMA-208ENST00000523263 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
VIRMA-208ENST00000523263 AGLP35573 1532 aa15.74■□□□□ 0.11
VIRMA-208ENST00000523263 SETD1BQ9UPS6 1966 aaKnown RBP15.74■□□□□ 0.11
VIRMA-208ENST00000523263 TRAPPC8Q9Y2L5 1435 aa15.74■□□□□ 0.11
VIRMA-208ENST00000523263 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
VIRMA-208ENST00000523263 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
VIRMA-208ENST00000523263 CLIP1P30622 1438 aa15.73■□□□□ 0.11
VIRMA-208ENST00000523263 MYO5CQ9NQX4 1742 aa15.73■□□□□ 0.11
VIRMA-208ENST00000523263 IQSEC2Q5JU85 1478 aa15.72■□□□□ 0.11
VIRMA-208ENST00000523263 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
VIRMA-208ENST00000523263 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
VIRMA-208ENST00000523263 KIF14Q15058 1648 aa15.72■□□□□ 0.11
VIRMA-208ENST00000523263 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
VIRMA-208ENST00000523263 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
VIRMA-208ENST00000523263 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
VIRMA-208ENST00000523263 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
VIRMA-208ENST00000523263 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
VIRMA-208ENST00000523263 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
VIRMA-208ENST00000523263 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
VIRMA-208ENST00000523263 NPATQ14207 1427 aa15.66■□□□□ 0.1
VIRMA-208ENST00000523263 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
VIRMA-208ENST00000523263 C3P01024 1663 aa15.63■□□□□ 0.09
VIRMA-208ENST00000523263 ABCC1P33527 1531 aa15.63■□□□□ 0.09
VIRMA-208ENST00000523263 CCDC18Q5T9S5 1454 aa15.61■□□□□ 0.09
VIRMA-208ENST00000523263 ZMYM3Q14202 1370 aa15.61■□□□□ 0.09
VIRMA-208ENST00000523263 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
VIRMA-208ENST00000523263 CDC42BPBQ9Y5S2 1711 aa15.6■□□□□ 0.09
VIRMA-208ENST00000523263 SPATA31D1Q6ZQQ2 1576 aa15.6■□□□□ 0.09
VIRMA-208ENST00000523263 PREX2Q70Z35 1606 aa15.6■□□□□ 0.09
VIRMA-208ENST00000523263 PKD2Q13563 968 aa15.59■□□□□ 0.09
VIRMA-208ENST00000523263 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
VIRMA-208ENST00000523263 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
VIRMA-208ENST00000523263 KIAA1107Q9UPP5 1409 aa15.56■□□□□ 0.08
VIRMA-208ENST00000523263 PLA2R1Q13018 1463 aa15.56■□□□□ 0.08
VIRMA-208ENST00000523263 CAMSAP1Q5T5Y3 1602 aa15.56■□□□□ 0.08
VIRMA-208ENST00000523263 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
VIRMA-208ENST00000523263 MROH2AA6NES4 1674 aa15.55■□□□□ 0.08
VIRMA-208ENST00000523263 SAMD9LQ8IVG5 1584 aa15.55■□□□□ 0.08
VIRMA-208ENST00000523263 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
VIRMA-208ENST00000523263 NCKAP5LQ9HCH0 1330 aa15.54■□□□□ 0.08
VIRMA-208ENST00000523263 ZNF335Q9H4Z2 1342 aaPredicted RBP15.53■□□□□ 0.08
VIRMA-208ENST00000523263 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
VIRMA-208ENST00000523263 LRRIQ1Q96JM4 1722 aa15.53■□□□□ 0.08
VIRMA-208ENST00000523263 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
VIRMA-208ENST00000523263 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.08
VIRMA-208ENST00000523263 UBAP1LF5GYI3 381 aa15.52■□□□□ 0.08
VIRMA-208ENST00000523263 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
VIRMA-208ENST00000523263 HNRNPMP52272 730 aaKnown RBP eCLIP15.51■□□□□ 0.07
VIRMA-208ENST00000523263 PLEKHH2Q8IVE3 1493 aa15.51■□□□□ 0.07
VIRMA-208ENST00000523263 ZNF777Q9ULD5 760 aaPredicted RBP15.5■□□□□ 0.07
VIRMA-208ENST00000523263 A2MP01023 1474 aa15.49■□□□□ 0.07
VIRMA-208ENST00000523263 FYCO1Q9BQS8 1478 aa15.49■□□□□ 0.07
VIRMA-208ENST00000523263 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
VIRMA-208ENST00000523263 CDC42BPAQ5VT25 1732 aa15.48■□□□□ 0.07
VIRMA-208ENST00000523263 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
VIRMA-208ENST00000523263 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
VIRMA-208ENST00000523263 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
VIRMA-208ENST00000523263 ZNF142P52746 1687 aaPredicted RBP15.47■□□□□ 0.07
VIRMA-208ENST00000523263 CEP170BQ9Y4F5 1589 aaPredicted RBP15.46■□□□□ 0.07
VIRMA-208ENST00000523263 GGT6Q6P531 493 aa15.46■□□□□ 0.07
VIRMA-208ENST00000523263 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
VIRMA-208ENST00000523263 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
VIRMA-208ENST00000523263 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
VIRMA-208ENST00000523263 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
VIRMA-208ENST00000523263 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
VIRMA-208ENST00000523263 DHX29Q7Z478 1369 aaKnown RBP15.41■□□□□ 0.06
VIRMA-208ENST00000523263 SUPT6HQ7KZ85 1726 aaKnown RBP15.41■□□□□ 0.06
VIRMA-208ENST00000523263 TOM1O60784 492 aa15.41■□□□□ 0.06
VIRMA-208ENST00000523263 CLTCQ00610 1675 aaKnown RBP15.41■□□□□ 0.06
VIRMA-208ENST00000523263 MBD5Q9P267 1494 aa15.4■□□□□ 0.06
VIRMA-208ENST00000523263 CPS1P31327 1500 aa15.39■□□□□ 0.05
VIRMA-208ENST00000523263 HSPA1LP34931 641 aa15.38■□□□□ 0.05
VIRMA-208ENST00000523263 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
VIRMA-208ENST00000523263 DNMT1P26358 1616 aaKnown RBP15.37■□□□□ 0.05
VIRMA-208ENST00000523263 RSPH4AQ5TD94 716 aa15.37■□□□□ 0.05
VIRMA-208ENST00000523263 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
VIRMA-208ENST00000523263 SHANK2Q9UPX8 1470 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms