RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 HECW1Q76N89 1606 aa24.92■■□□□ 1.58
PCM1-218ENST00000523055 MLECQ14165 292 aa24.91■■□□□ 1.58
PCM1-218ENST00000523055 FER1L4A9Z1Z3 1794 aa24.9■■□□□ 1.58
PCM1-218ENST00000523055 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
PCM1-218ENST00000523055 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
PCM1-218ENST00000523055 SCAPERQ9BY12 1400 aa24.85■■□□□ 1.57
PCM1-218ENST00000523055 DISP3Q9P2K9 1392 aa24.84■■□□□ 1.57
PCM1-218ENST00000523055 SOCS7O14512 581 aa24.83■■□□□ 1.57
PCM1-218ENST00000523055 STRCQ7RTU9 1775 aa24.83■■□□□ 1.57
PCM1-218ENST00000523055 PLCH2O75038 1416 aa24.83■■□□□ 1.56
PCM1-218ENST00000523055 CEBPAP49715 358 aaPredicted RBP24.82■■□□□ 1.56
PCM1-218ENST00000523055 PREX1Q8TCU6 1659 aa24.82■■□□□ 1.56
PCM1-218ENST00000523055 ATP10AO60312 1499 aa24.81■■□□□ 1.56
PCM1-218ENST00000523055 CDK13Q14004 1512 aaKnown RBP24.79■■□□□ 1.56
PCM1-218ENST00000523055 C9orf84Q5VXU9 1444 aa24.79■■□□□ 1.56
PCM1-218ENST00000523055 ARHGAP35Q9NRY4 1499 aa24.75■■□□□ 1.55
PCM1-218ENST00000523055 DMRT2Q9Y5R5 561 aa24.71■■□□□ 1.55
PCM1-218ENST00000523055 SETD1BQ9UPS6 1966 aaKnown RBP24.7■■□□□ 1.54
PCM1-218ENST00000523055 UHRF1BP1Q6BDS2 1440 aa24.68■■□□□ 1.54
PCM1-218ENST00000523055 EFCAB2Q5VUJ9 269 aa24.67■■□□□ 1.54
PCM1-218ENST00000523055 PTPRTO14522 1441 aa24.66■■□□□ 1.54
PCM1-218ENST00000523055 KDM5CP41229 1560 aa24.66■■□□□ 1.54
PCM1-218ENST00000523055 LTBP4Q8N2S1 1624 aa24.64■■□□□ 1.54
PCM1-218ENST00000523055 ZNF518AQ6AHZ1 1483 aa24.64■■□□□ 1.54
PCM1-218ENST00000523055 SPATA31D1Q6ZQQ2 1576 aa24.64■■□□□ 1.54
PCM1-218ENST00000523055 AFAP1Q8N556 730 aa24.64■■□□□ 1.54
PCM1-218ENST00000523055 MYO5CQ9NQX4 1742 aa24.63■■□□□ 1.53
PCM1-218ENST00000523055 LRRIQ1Q96JM4 1722 aa24.61■■□□□ 1.53
PCM1-218ENST00000523055 DIP2CQ9Y2E4 1556 aa24.61■■□□□ 1.53
PCM1-218ENST00000523055 KIF14Q15058 1648 aa24.61■■□□□ 1.53
PCM1-218ENST00000523055 REREQ9P2R6 1566 aa24.6■■□□□ 1.53
PCM1-218ENST00000523055 C3P01024 1663 aa24.59■■□□□ 1.53
PCM1-218ENST00000523055 FMN1Q68DA7 1419 aa24.58■■□□□ 1.52
PCM1-218ENST00000523055 ABCA6Q8N139 1617 aa24.55■■□□□ 1.52
PCM1-218ENST00000523055 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
PCM1-218ENST00000523055 MLH3Q9UHC1 1453 aa24.53■■□□□ 1.52
PCM1-218ENST00000523055 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
PCM1-218ENST00000523055 AGLP35573 1532 aa24.53■■□□□ 1.52
PCM1-218ENST00000523055 ARHGAP5Q13017 1502 aa24.53■■□□□ 1.52
PCM1-218ENST00000523055 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
PCM1-218ENST00000523055 TRAPPC8Q9Y2L5 1435 aa24.52■■□□□ 1.52
PCM1-218ENST00000523055 CLIP1P30622 1438 aa24.5■■□□□ 1.51
PCM1-218ENST00000523055 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
PCM1-218ENST00000523055 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
PCM1-218ENST00000523055 CDC42BPBQ9Y5S2 1711 aa24.48■■□□□ 1.51
PCM1-218ENST00000523055 MYT1LQ9UL68 1186 aa24.45■■□□□ 1.51
PCM1-218ENST00000523055 ABCC1P33527 1531 aa24.43■■□□□ 1.5
PCM1-218ENST00000523055 KIDINS220Q9ULH0 1771 aa24.41■■□□□ 1.5
PCM1-218ENST00000523055 CAMSAP1Q5T5Y3 1602 aa24.4■■□□□ 1.5
PCM1-218ENST00000523055 CASKIN1Q8WXD9 1431 aa24.4■■□□□ 1.5
PCM1-218ENST00000523055 CNTLNQ9NXG0 1405 aa24.4■■□□□ 1.5
PCM1-218ENST00000523055 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
PCM1-218ENST00000523055 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
PCM1-218ENST00000523055 NPATQ14207 1427 aa24.38■■□□□ 1.49
PCM1-218ENST00000523055 ITSN2Q9NZM3 1697 aa24.38■■□□□ 1.49
PCM1-218ENST00000523055 ZNF335Q9H4Z2 1342 aaPredicted RBP24.37■■□□□ 1.49
PCM1-218ENST00000523055 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
PCM1-218ENST00000523055 NCKAP5LQ9HCH0 1330 aa24.36■■□□□ 1.49
PCM1-218ENST00000523055 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
PCM1-218ENST00000523055 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
PCM1-218ENST00000523055 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
PCM1-218ENST00000523055 MROH2AA6NES4 1674 aa24.33■■□□□ 1.49
PCM1-218ENST00000523055 CCDC18Q5T9S5 1454 aa24.32■■□□□ 1.48
PCM1-218ENST00000523055 UBAP1LF5GYI3 381 aa24.3■■□□□ 1.48
PCM1-218ENST00000523055 SAMD9LQ8IVG5 1584 aa24.29■■□□□ 1.48
PCM1-218ENST00000523055 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
PCM1-218ENST00000523055 TCOF1Q13428 1488 aaKnown RBP24.28■■□□□ 1.48
PCM1-218ENST00000523055 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
PCM1-218ENST00000523055 ZNF142P52746 1687 aaPredicted RBP24.25■■□□□ 1.47
PCM1-218ENST00000523055 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
PCM1-218ENST00000523055 PKD2Q13563 968 aa24.24■■□□□ 1.47
PCM1-218ENST00000523055 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
PCM1-218ENST00000523055 PLXNC1O60486 1568 aa24.21■■□□□ 1.47
PCM1-218ENST00000523055 CEP170BQ9Y4F5 1589 aaPredicted RBP24.21■■□□□ 1.47
PCM1-218ENST00000523055 SUPT6HQ7KZ85 1726 aaKnown RBP24.21■■□□□ 1.47
PCM1-218ENST00000523055 SYCP2Q9BX26 1530 aa24.21■■□□□ 1.47
PCM1-218ENST00000523055 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
PCM1-218ENST00000523055 SPAG9O60271 1321 aaKnown RBP24.18■■□□□ 1.46
PCM1-218ENST00000523055 GPATCH8Q9UKJ3 1502 aaKnown RBP24.17■■□□□ 1.46
PCM1-218ENST00000523055 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.46
PCM1-218ENST00000523055 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
PCM1-218ENST00000523055 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
PCM1-218ENST00000523055 INO80Q9ULG1 1556 aaPredicted RBP24.15■■□□□ 1.46
PCM1-218ENST00000523055 MED1Q15648 1581 aaPredicted RBP24.14■■□□□ 1.46
PCM1-218ENST00000523055 HSPA1LP34931 641 aa24.14■■□□□ 1.45
PCM1-218ENST00000523055 PPP6R1Q9UPN7 881 aa24.14■■□□□ 1.45
PCM1-218ENST00000523055 A2MP01023 1474 aa24.14■■□□□ 1.45
PCM1-218ENST00000523055 KIAA1107Q9UPP5 1409 aa24.11■■□□□ 1.45
PCM1-218ENST00000523055 GGT6Q6P531 493 aa24.1■■□□□ 1.45
PCM1-218ENST00000523055 DNMT1P26358 1616 aaKnown RBP24.09■■□□□ 1.45
PCM1-218ENST00000523055 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
PCM1-218ENST00000523055 NEURL4Q96JN8 1562 aa24.07■■□□□ 1.44
PCM1-218ENST00000523055 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
PCM1-218ENST00000523055 PIP4K2BP78356 416 aa24.05■■□□□ 1.44
PCM1-218ENST00000523055 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
PCM1-218ENST00000523055 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
PCM1-218ENST00000523055 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
PCM1-218ENST00000523055 ALKQ9UM73 1620 aa24.03■■□□□ 1.44
PCM1-218ENST00000523055 PLEKHH2Q8IVE3 1493 aa24.03■■□□□ 1.44
PCM1-218ENST00000523055 CPS1P31327 1500 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms