RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 MED1Q15648 1581 aaPredicted RBP8.59□□□□□ -1.03
CDKL3-209ENST00000523054 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
CDKL3-209ENST00000523054 PTPRMP28827 1452 aa8.58□□□□□ -1.04
CDKL3-209ENST00000523054 WDR97A6NE52 1622 aa8.58□□□□□ -1.04
CDKL3-209ENST00000523054 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
CDKL3-209ENST00000523054 FKBP8Q14318 412 aa8.57□□□□□ -1.04
CDKL3-209ENST00000523054 PPRC1Q5VV67 1664 aaKnown RBP8.57□□□□□ -1.04
CDKL3-209ENST00000523054 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
CDKL3-209ENST00000523054 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
CDKL3-209ENST00000523054 KIF12Q96FN5 646 aa8.55□□□□□ -1.04
CDKL3-209ENST00000523054 TSPYL2Q9H2G4 693 aaPredicted RBP8.55□□□□□ -1.04
CDKL3-209ENST00000523054 BMP2KQ9NSY1 1161 aaPredicted RBP8.55□□□□□ -1.04
CDKL3-209ENST00000523054 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
CDKL3-209ENST00000523054 SHROOM2Q13796 1616 aa8.52□□□□□ -1.05
CDKL3-209ENST00000523054 TIE1P35590 1138 aa8.52□□□□□ -1.05
CDKL3-209ENST00000523054 HSPA2P54652 639 aa8.52□□□□□ -1.05
CDKL3-209ENST00000523054 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
CDKL3-209ENST00000523054 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
CDKL3-209ENST00000523054 TRPC6Q9Y210 931 aa8.5□□□□□ -1.05
CDKL3-209ENST00000523054 KIF21BO75037 1637 aa8.5□□□□□ -1.05
CDKL3-209ENST00000523054 POLA1P09884 1462 aaPredicted RBP8.49□□□□□ -1.05
CDKL3-209ENST00000523054 IQSEC2Q5JU85 1478 aa8.49□□□□□ -1.05
CDKL3-209ENST00000523054 ADAMTSL3P82987 1691 aa8.49□□□□□ -1.05
CDKL3-209ENST00000523054 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
CDKL3-209ENST00000523054 ADCY10Q96PN6 1610 aa8.48□□□□□ -1.05
CDKL3-209ENST00000523054 RAD54L2Q9Y4B4 1467 aa8.48□□□□□ -1.05
CDKL3-209ENST00000523054 GLI2P10070 1586 aa8.47□□□□□ -1.05
CDKL3-209ENST00000523054 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
CDKL3-209ENST00000523054 COLQQ9Y215 455 aaPredicted RBP8.46□□□□□ -1.05
CDKL3-209ENST00000523054 MAP3K13O43283 966 aa8.45□□□□□ -1.06
CDKL3-209ENST00000523054 SOGA1O94964 1423 aa8.45□□□□□ -1.06
CDKL3-209ENST00000523054 PBRM1Q86U86 1689 aa8.44□□□□□ -1.06
CDKL3-209ENST00000523054 TTLL13PA6NNM8 815 aa8.44□□□□□ -1.06
CDKL3-209ENST00000523054 SEC24BO95487 1268 aa8.44□□□□□ -1.06
CDKL3-209ENST00000523054 PROM2Q8N271 834 aa8.44□□□□□ -1.06
CDKL3-209ENST00000523054 IER5LQ5T953 404 aa8.43□□□□□ -1.06
CDKL3-209ENST00000523054 PRG4Q92954 1404 aaPredicted RBP8.42□□□□□ -1.06
CDKL3-209ENST00000523054 NUP160Q12769 1436 aa8.41□□□□□ -1.06
CDKL3-209ENST00000523054 GRIN2AQ12879 1464 aa8.4□□□□□ -1.06
CDKL3-209ENST00000523054 WIZO95785 1651 aa8.4□□□□□ -1.06
CDKL3-209ENST00000523054 MADDQ8WXG6 1647 aa8.4□□□□□ -1.07
CDKL3-209ENST00000523054 ST18O60284 1047 aa8.39□□□□□ -1.07
CDKL3-209ENST00000523054 RASEFQ8IZ41 740 aa8.38□□□□□ -1.07
CDKL3-209ENST00000523054 LTBP4Q8N2S1 1624 aa8.38□□□□□ -1.07
CDKL3-209ENST00000523054 MAP3K4Q9Y6R4 1608 aa8.38□□□□□ -1.07
CDKL3-209ENST00000523054 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
CDKL3-209ENST00000523054 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
CDKL3-209ENST00000523054 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
CDKL3-209ENST00000523054 KIAA0586Q9BVV6 1533 aa8.37□□□□□ -1.07
CDKL3-209ENST00000523054 PLB1Q6P1J6 1458 aa8.37□□□□□ -1.07
CDKL3-209ENST00000523054 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
CDKL3-209ENST00000523054 YEATS2Q9ULM3 1422 aa8.37□□□□□ -1.07
CDKL3-209ENST00000523054 BCORL1Q5H9F3 1711 aa8.37□□□□□ -1.07
CDKL3-209ENST00000523054 PTPRTO14522 1441 aa8.36□□□□□ -1.07
CDKL3-209ENST00000523054 CFAP43Q8NDM7 1665 aa8.36□□□□□ -1.07
CDKL3-209ENST00000523054 RIMS1Q86UR5 1692 aaKnown RBP8.35□□□□□ -1.07
CDKL3-209ENST00000523054 PLEKHG5O94827 1062 aa8.35□□□□□ -1.07
CDKL3-209ENST00000523054 MMRN1Q13201 1228 aa8.34□□□□□ -1.07
CDKL3-209ENST00000523054 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
CDKL3-209ENST00000523054 ASXL2Q76L83 1435 aa8.33□□□□□ -1.08
CDKL3-209ENST00000523054 HSPA1LP34931 641 aa8.33□□□□□ -1.08
CDKL3-209ENST00000523054 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
CDKL3-209ENST00000523054 PCDHB13Q9Y5F0 798 aa8.31□□□□□ -1.08
CDKL3-209ENST00000523054 TMEM121BQ9BXQ6 578 aaPredicted RBP8.3□□□□□ -1.08
CDKL3-209ENST00000523054 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
CDKL3-209ENST00000523054 MIER1Q8N108 512 aa8.29□□□□□ -1.08
CDKL3-209ENST00000523054 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
CDKL3-209ENST00000523054 PLCG2P16885 1265 aa8.28□□□□□ -1.08
CDKL3-209ENST00000523054 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
CDKL3-209ENST00000523054 ADAMTS12P58397 1594 aa8.27□□□□□ -1.08
CDKL3-209ENST00000523054 PREX1Q8TCU6 1659 aa8.27□□□□□ -1.09
CDKL3-209ENST00000523054 ABCC2Q92887 1545 aa8.26□□□□□ -1.09
CDKL3-209ENST00000523054 IRX5P78411 483 aaPredicted RBP8.26□□□□□ -1.09
CDKL3-209ENST00000523054 ARID4BQ4LE39 1312 aaPredicted RBP8.26□□□□□ -1.09
CDKL3-209ENST00000523054 IFNL1Q8IU54 200 aa8.25□□□□□ -1.09
CDKL3-209ENST00000523054 FBXO3Q9UK99 471 aa8.25□□□□□ -1.09
CDKL3-209ENST00000523054 SETD1AO15047 1707 aaKnown RBP8.25□□□□□ -1.09
CDKL3-209ENST00000523054 SNPHO15079 494 aa8.25□□□□□ -1.09
CDKL3-209ENST00000523054 TMEM106CQ9BVX2 250 aa8.25□□□□□ -1.09
CDKL3-209ENST00000523054 CUL7Q14999 1698 aa8.24□□□□□ -1.09
CDKL3-209ENST00000523054 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
CDKL3-209ENST00000523054 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
CDKL3-209ENST00000523054 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
CDKL3-209ENST00000523054 NUBP1P53384 320 aa8.22□□□□□ -1.09
CDKL3-209ENST00000523054 PRKCSHP14314 528 aaPredicted RBP8.21□□□□□ -1.1
CDKL3-209ENST00000523054 SRCAPQ6ZRS2 3230 aa8.2□□□□□ -1.1
CDKL3-209ENST00000523054 MAGI3Q5TCQ9 1506 aa8.2□□□□□ -1.1
CDKL3-209ENST00000523054 PIP4K2BP78356 416 aa8.2□□□□□ -1.1
CDKL3-209ENST00000523054 UPF1Q92900 1129 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDKL3-209ENST00000523054 OCEL1Q9H607 264 aa8.2□□□□□ -1.1
CDKL3-209ENST00000523054 ZBTB47Q9UFB7 747 aaPredicted RBP8.2□□□□□ -1.1
CDKL3-209ENST00000523054 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.19□□□□□ -1.1
CDKL3-209ENST00000523054 FHAD1B1AJZ9 1412 aa8.19□□□□□ -1.1
CDKL3-209ENST00000523054 MARVELD3Q96A59 401 aa8.18□□□□□ -1.1
CDKL3-209ENST00000523054 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
CDKL3-209ENST00000523054 RUSC2Q8N2Y8 1516 aa8.17□□□□□ -1.1
CDKL3-209ENST00000523054 ARAP3Q8WWN8 1544 aa8.17□□□□□ -1.1
CDKL3-209ENST00000523054 POTEAQ6S8J7 498 aa8.17□□□□□ -1.1
CDKL3-209ENST00000523054 TOM1O60784 492 aa8.16□□□□□ -1.1
CDKL3-209ENST00000523054 VASPP50552 380 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms