RNA–Protein interactions for RNA: ENST00000521147.1

CASC9-202, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-202ENST00000521147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
CASC9-202ENST00000521147 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
CASC9-202ENST00000521147 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
CASC9-202ENST00000521147 ATP10BO94823 1461 aa12.85□□□□□ -0.35
CASC9-202ENST00000521147 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
CASC9-202ENST00000521147 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
CASC9-202ENST00000521147 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.36
CASC9-202ENST00000521147 SOCS7O14512 581 aa12.82□□□□□ -0.36
CASC9-202ENST00000521147 NEO1Q92859 1461 aa12.8□□□□□ -0.36
CASC9-202ENST00000521147 RICTORQ6R327 1708 aa12.8□□□□□ -0.36
CASC9-202ENST00000521147 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
CASC9-202ENST00000521147 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.36
CASC9-202ENST00000521147 FER1L4A9Z1Z3 1794 aa12.77□□□□□ -0.36
CASC9-202ENST00000521147 MLECQ14165 292 aa12.77□□□□□ -0.37
CASC9-202ENST00000521147 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.37
CASC9-202ENST00000521147 YEATS2Q9ULM3 1422 aa12.76□□□□□ -0.37
CASC9-202ENST00000521147 RAPGEF6Q8TEU7 1601 aa12.76□□□□□ -0.37
CASC9-202ENST00000521147 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
CASC9-202ENST00000521147 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
CASC9-202ENST00000521147 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
CASC9-202ENST00000521147 FANCAO15360 1455 aa12.72□□□□□ -0.37
CASC9-202ENST00000521147 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
CASC9-202ENST00000521147 AKNAQ7Z591 1439 aa12.71□□□□□ -0.37
CASC9-202ENST00000521147 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.38
CASC9-202ENST00000521147 PRXQ9BXM0 1461 aa12.71□□□□□ -0.38
CASC9-202ENST00000521147 PREX1Q8TCU6 1659 aa12.7□□□□□ -0.38
CASC9-202ENST00000521147 SAMD9Q5K651 1589 aa12.7□□□□□ -0.38
CASC9-202ENST00000521147 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
CASC9-202ENST00000521147 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
CASC9-202ENST00000521147 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
CASC9-202ENST00000521147 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
CASC9-202ENST00000521147 POGZQ7Z3K3 1410 aa12.69□□□□□ -0.38
CASC9-202ENST00000521147 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
CASC9-202ENST00000521147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
CASC9-202ENST00000521147 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
CASC9-202ENST00000521147 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
CASC9-202ENST00000521147 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
CASC9-202ENST00000521147 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
CASC9-202ENST00000521147 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
CASC9-202ENST00000521147 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
CASC9-202ENST00000521147 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
CASC9-202ENST00000521147 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
CASC9-202ENST00000521147 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
CASC9-202ENST00000521147 C9orf84Q5VXU9 1444 aa12.59□□□□□ -0.39
CASC9-202ENST00000521147 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
CASC9-202ENST00000521147 ATP10AO60312 1499 aa12.59□□□□□ -0.39
CASC9-202ENST00000521147 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
CASC9-202ENST00000521147 C3P01024 1663 aa12.57□□□□□ -0.4
CASC9-202ENST00000521147 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
CASC9-202ENST00000521147 SETD1BQ9UPS6 1966 aaKnown RBP12.56□□□□□ -0.4
CASC9-202ENST00000521147 PTPRTO14522 1441 aa12.54□□□□□ -0.4
CASC9-202ENST00000521147 POLA2Q14181 598 aa12.53□□□□□ -0.4
CASC9-202ENST00000521147 MYO5CQ9NQX4 1742 aa12.53□□□□□ -0.4
CASC9-202ENST00000521147 PLCH2O75038 1416 aa12.53□□□□□ -0.4
CASC9-202ENST00000521147 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
CASC9-202ENST00000521147 KIF14Q15058 1648 aa12.51□□□□□ -0.41
CASC9-202ENST00000521147 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
CASC9-202ENST00000521147 AFAP1Q8N556 730 aa12.5□□□□□ -0.41
CASC9-202ENST00000521147 KDM5CP41229 1560 aa12.49□□□□□ -0.41
CASC9-202ENST00000521147 NCOA1Q15788 1441 aa12.49□□□□□ -0.41
CASC9-202ENST00000521147 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
CASC9-202ENST00000521147 IQSEC2Q5JU85 1478 aa12.48□□□□□ -0.41
CASC9-202ENST00000521147 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
CASC9-202ENST00000521147 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
CASC9-202ENST00000521147 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
CASC9-202ENST00000521147 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
CASC9-202ENST00000521147 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
CASC9-202ENST00000521147 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.42
CASC9-202ENST00000521147 NCKAP5LQ9HCH0 1330 aa12.45□□□□□ -0.42
CASC9-202ENST00000521147 EFCAB2Q5VUJ9 269 aa12.45□□□□□ -0.42
CASC9-202ENST00000521147 ATP1B4Q9UN42 357 aaPredicted RBP12.45□□□□□ -0.42
CASC9-202ENST00000521147 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
CASC9-202ENST00000521147 MED1Q15648 1581 aaPredicted RBP12.44□□□□□ -0.42
CASC9-202ENST00000521147 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
CASC9-202ENST00000521147 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
CASC9-202ENST00000521147 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
CASC9-202ENST00000521147 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
CASC9-202ENST00000521147 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
CASC9-202ENST00000521147 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
CASC9-202ENST00000521147 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
CASC9-202ENST00000521147 ITSN2Q9NZM3 1697 aa12.41□□□□□ -0.42
CASC9-202ENST00000521147 HSPA1LP34931 641 aa12.4□□□□□ -0.42
CASC9-202ENST00000521147 AGLP35573 1532 aa12.4□□□□□ -0.42
CASC9-202ENST00000521147 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
CASC9-202ENST00000521147 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
CASC9-202ENST00000521147 MLH3Q9UHC1 1453 aa12.38□□□□□ -0.43
CASC9-202ENST00000521147 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
CASC9-202ENST00000521147 ABCC1P33527 1531 aa12.37□□□□□ -0.43
CASC9-202ENST00000521147 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
CASC9-202ENST00000521147 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
CASC9-202ENST00000521147 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
CASC9-202ENST00000521147 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
CASC9-202ENST00000521147 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
CASC9-202ENST00000521147 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
CASC9-202ENST00000521147 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
CASC9-202ENST00000521147 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
CASC9-202ENST00000521147 ZMYM3Q14202 1370 aa12.34□□□□□ -0.43
CASC9-202ENST00000521147 NPATQ14207 1427 aa12.34□□□□□ -0.43
CASC9-202ENST00000521147 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
CASC9-202ENST00000521147 CDC42BPAQ5VT25 1732 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms