RNA–Protein interactions for RNA: ENST00000521118.5

CDKL3-206, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKL3, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-206ENST00000521118 CHD1O14646 1710 aa21.23■□□□□ 0.99
CDKL3-206ENST00000521118 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
CDKL3-206ENST00000521118 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
CDKL3-206ENST00000521118 GTF3C3Q9Y5Q9 886 aa21.22■□□□□ 0.99
CDKL3-206ENST00000521118 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
CDKL3-206ENST00000521118 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
CDKL3-206ENST00000521118 CAMSAP2Q08AD1 1489 aa21.2■□□□□ 0.98
CDKL3-206ENST00000521118 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
CDKL3-206ENST00000521118 ATP10BO94823 1461 aa21.19■□□□□ 0.98
CDKL3-206ENST00000521118 ITSN2Q9NZM3 1697 aa21.18■□□□□ 0.98
CDKL3-206ENST00000521118 ROCK1Q13464 1354 aa21.17■□□□□ 0.98
CDKL3-206ENST00000521118 FOXD1Q16676 465 aa21.16■□□□□ 0.98
CDKL3-206ENST00000521118 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.98
CDKL3-206ENST00000521118 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.98
CDKL3-206ENST00000521118 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
CDKL3-206ENST00000521118 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
CDKL3-206ENST00000521118 ZNF777Q9ULD5 760 aaPredicted RBP21.12■□□□□ 0.97
CDKL3-206ENST00000521118 CROCC2H7BZ55 1655 aa21.12■□□□□ 0.97
CDKL3-206ENST00000521118 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
CDKL3-206ENST00000521118 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
CDKL3-206ENST00000521118 PTPRGP23470 1445 aa21.08■□□□□ 0.97
CDKL3-206ENST00000521118 ERCC6L2Q5T890 1561 aa21.08■□□□□ 0.97
CDKL3-206ENST00000521118 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.97
CDKL3-206ENST00000521118 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
CDKL3-206ENST00000521118 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
CDKL3-206ENST00000521118 PLEKHD1A6NEE1 506 aa21.06■□□□□ 0.96
CDKL3-206ENST00000521118 ANKRD30BQ9BXX2 1392 aa21.03■□□□□ 0.96
CDKL3-206ENST00000521118 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
CDKL3-206ENST00000521118 PZPP20742 1482 aa21.03■□□□□ 0.96
CDKL3-206ENST00000521118 L3MBTL2Q969R5 705 aa20.99■□□□□ 0.95
CDKL3-206ENST00000521118 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
CDKL3-206ENST00000521118 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
CDKL3-206ENST00000521118 CDC42BPBQ9Y5S2 1711 aa20.96■□□□□ 0.95
CDKL3-206ENST00000521118 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
CDKL3-206ENST00000521118 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
CDKL3-206ENST00000521118 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
CDKL3-206ENST00000521118 SAMD9LQ8IVG5 1584 aa20.93■□□□□ 0.94
CDKL3-206ENST00000521118 HNRNPMP52272 730 aaKnown RBP eCLIP20.92■□□□□ 0.94
CDKL3-206ENST00000521118 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
CDKL3-206ENST00000521118 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
CDKL3-206ENST00000521118 TTC37Q6PGP7 1564 aa20.91■□□□□ 0.94
CDKL3-206ENST00000521118 MBD5Q9P267 1494 aa20.91■□□□□ 0.94
CDKL3-206ENST00000521118 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
CDKL3-206ENST00000521118 NBPF8Q3BBV2 869 aa20.9■□□□□ 0.94
CDKL3-206ENST00000521118 ANKRD50Q9ULJ7 1429 aa20.9■□□□□ 0.94
CDKL3-206ENST00000521118 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
CDKL3-206ENST00000521118 ABCC2Q92887 1545 aa20.88■□□□□ 0.93
CDKL3-206ENST00000521118 ARHGEF5Q12774 1597 aa20.88■□□□□ 0.93
CDKL3-206ENST00000521118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDKL3-206ENST00000521118 KIAA1107Q9UPP5 1409 aa20.85■□□□□ 0.93
CDKL3-206ENST00000521118 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
CDKL3-206ENST00000521118 PKD2Q13563 968 aa20.84■□□□□ 0.93
CDKL3-206ENST00000521118 SYCP2Q9BX26 1530 aa20.82■□□□□ 0.92
CDKL3-206ENST00000521118 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
CDKL3-206ENST00000521118 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
CDKL3-206ENST00000521118 C11orf95C9JLR9 678 aaPredicted RBP20.8■□□□□ 0.92
CDKL3-206ENST00000521118 TSPY4P0CV99 314 aa20.8■□□□□ 0.92
CDKL3-206ENST00000521118 TSPY10P0CW01 314 aa20.8■□□□□ 0.92
CDKL3-206ENST00000521118 ZCCHC11Q5TAX3 1644 aaKnown RBP20.79■□□□□ 0.92
CDKL3-206ENST00000521118 NUP155O75694 1391 aa20.79■□□□□ 0.92
CDKL3-206ENST00000521118 ARHGAP5Q13017 1502 aa20.79■□□□□ 0.92
CDKL3-206ENST00000521118 EIF4G2P78344 907 aaKnown RBP eCLIP20.79■□□□□ 0.92
CDKL3-206ENST00000521118 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
CDKL3-206ENST00000521118 ANP32CO43423 234 aa20.78■□□□□ 0.92
CDKL3-206ENST00000521118 MYO5CQ9NQX4 1742 aa20.77■□□□□ 0.92
CDKL3-206ENST00000521118 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
CDKL3-206ENST00000521118 SPATA31E1Q6ZUB1 1445 aa20.74■□□□□ 0.91
CDKL3-206ENST00000521118 CCER2I3L3R5 266 aa20.73■□□□□ 0.91
CDKL3-206ENST00000521118 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
CDKL3-206ENST00000521118 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.91
CDKL3-206ENST00000521118 CCDC7Q96M83 1385 aa20.69■□□□□ 0.9
CDKL3-206ENST00000521118 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
CDKL3-206ENST00000521118 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
CDKL3-206ENST00000521118 CNTLNQ9NXG0 1405 aa20.66■□□□□ 0.9
CDKL3-206ENST00000521118 PLCH2O75038 1416 aa20.64■□□□□ 0.9
CDKL3-206ENST00000521118 POLR1AO95602 1720 aaPredicted RBP20.64■□□□□ 0.89
CDKL3-206ENST00000521118 RSPH4AQ5TD94 716 aa20.64■□□□□ 0.89
CDKL3-206ENST00000521118 UNC13BO14795 1591 aa20.64■□□□□ 0.89
CDKL3-206ENST00000521118 PLXNC1O60486 1568 aa20.64■□□□□ 0.89
CDKL3-206ENST00000521118 BCORL1Q5H9F3 1711 aa20.64■□□□□ 0.89
CDKL3-206ENST00000521118 KIF7Q2M1P5 1343 aa20.63■□□□□ 0.89
CDKL3-206ENST00000521118 PLEKHH2Q8IVE3 1493 aa20.62■□□□□ 0.89
CDKL3-206ENST00000521118 ABCC1P33527 1531 aa20.61■□□□□ 0.89
CDKL3-206ENST00000521118 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
CDKL3-206ENST00000521118 UHRF1BP1Q6BDS2 1440 aa20.6■□□□□ 0.89
CDKL3-206ENST00000521118 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
CDKL3-206ENST00000521118 KDM5CP41229 1560 aa20.6■□□□□ 0.89
CDKL3-206ENST00000521118 PLA2R1Q13018 1463 aa20.59■□□□□ 0.89
CDKL3-206ENST00000521118 USP47Q96K76 1375 aa20.59■□□□□ 0.89
CDKL3-206ENST00000521118 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
CDKL3-206ENST00000521118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.58■□□□□ 0.88
CDKL3-206ENST00000521118 RALGAPBQ86X10 1494 aa20.56■□□□□ 0.88
CDKL3-206ENST00000521118 KDM2AQ9Y2K7 1162 aa20.56■□□□□ 0.88
CDKL3-206ENST00000521118 IQGAP3Q86VI3 1631 aa20.56■□□□□ 0.88
CDKL3-206ENST00000521118 EFCAB2Q5VUJ9 269 aa20.55■□□□□ 0.88
CDKL3-206ENST00000521118 DUOX2Q9NRD8 1548 aa20.55■□□□□ 0.88
CDKL3-206ENST00000521118 DCAF11Q8TEB1 546 aa20.52■□□□□ 0.88
CDKL3-206ENST00000521118 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
CDKL3-206ENST00000521118 WDR7Q9Y4E6 1490 aa20.51■□□□□ 0.87
CDKL3-206ENST00000521118 PRKRIP1Q9H875 184 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms