RNA–Protein interactions for RNA: ENST00000520997.1

VPS37A-207, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-207ENST00000520997 TTC37Q6PGP7 1564 aa11.3□□□□□ -0.6
VPS37A-207ENST00000520997 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
VPS37A-207ENST00000520997 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
VPS37A-207ENST00000520997 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
VPS37A-207ENST00000520997 RICTORQ6R327 1708 aa11.29□□□□□ -0.6
VPS37A-207ENST00000520997 STRCQ7RTU9 1775 aa11.29□□□□□ -0.6
VPS37A-207ENST00000520997 DSG3P32926 999 aa11.29□□□□□ -0.6
VPS37A-207ENST00000520997 APLP2Q06481 763 aa11.28□□□□□ -0.6
VPS37A-207ENST00000520997 RAPGEF2Q9Y4G8 1499 aa11.27□□□□□ -0.6
VPS37A-207ENST00000520997 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
VPS37A-207ENST00000520997 CFAP74Q9C0B2 1584 aa11.26□□□□□ -0.61
VPS37A-207ENST00000520997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.25□□□□□ -0.61
VPS37A-207ENST00000520997 HNRNPUL2Q1KMD3 747 aaKnown RBP11.25□□□□□ -0.61
VPS37A-207ENST00000520997 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
VPS37A-207ENST00000520997 AKNAQ7Z591 1439 aa11.25□□□□□ -0.61
VPS37A-207ENST00000520997 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
VPS37A-207ENST00000520997 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
VPS37A-207ENST00000520997 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
VPS37A-207ENST00000520997 ZMYM4Q5VZL5 1548 aa11.23□□□□□ -0.61
VPS37A-207ENST00000520997 ZFYVE16Q7Z3T8 1539 aa11.23□□□□□ -0.61
VPS37A-207ENST00000520997 SETD1BQ9UPS6 1966 aaKnown RBP11.23□□□□□ -0.61
VPS37A-207ENST00000520997 ATP10BO94823 1461 aa11.2□□□□□ -0.62
VPS37A-207ENST00000520997 FAM9AQ8IZU1 332 aaPredicted RBP11.2□□□□□ -0.62
VPS37A-207ENST00000520997 FHOD3Q2V2M9 1422 aa11.19□□□□□ -0.62
VPS37A-207ENST00000520997 UHRF1BP1Q6BDS2 1440 aa11.19□□□□□ -0.62
VPS37A-207ENST00000520997 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
VPS37A-207ENST00000520997 PTPRTO14522 1441 aa11.18□□□□□ -0.62
VPS37A-207ENST00000520997 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
VPS37A-207ENST00000520997 ARHGEF12Q9NZN5 1544 aa11.18□□□□□ -0.62
VPS37A-207ENST00000520997 MAGI2Q86UL8 1455 aa11.18□□□□□ -0.62
VPS37A-207ENST00000520997 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
VPS37A-207ENST00000520997 MLECQ14165 292 aa11.17□□□□□ -0.62
VPS37A-207ENST00000520997 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
VPS37A-207ENST00000520997 RAPGEF6Q8TEU7 1601 aa11.16□□□□□ -0.62
VPS37A-207ENST00000520997 HECW1Q76N89 1606 aa11.14□□□□□ -0.63
VPS37A-207ENST00000520997 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
VPS37A-207ENST00000520997 C3P01024 1663 aa11.11□□□□□ -0.63
VPS37A-207ENST00000520997 C9orf84Q5VXU9 1444 aa11.1□□□□□ -0.63
VPS37A-207ENST00000520997 UBAP1LF5GYI3 381 aa11.09□□□□□ -0.63
VPS37A-207ENST00000520997 ABCB7O75027 752 aa11.09□□□□□ -0.63
VPS37A-207ENST00000520997 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
VPS37A-207ENST00000520997 ATP10AO60312 1499 aa11.08□□□□□ -0.64
VPS37A-207ENST00000520997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS37A-207ENST00000520997 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
VPS37A-207ENST00000520997 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
VPS37A-207ENST00000520997 SAMD9Q5K651 1589 aa11.07□□□□□ -0.64
VPS37A-207ENST00000520997 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
VPS37A-207ENST00000520997 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
VPS37A-207ENST00000520997 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
VPS37A-207ENST00000520997 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
VPS37A-207ENST00000520997 SCAPERQ9BY12 1400 aa11.03□□□□□ -0.64
VPS37A-207ENST00000520997 CAMSAP1Q5T5Y3 1602 aa11.03□□□□□ -0.64
VPS37A-207ENST00000520997 MYO5CQ9NQX4 1742 aa11.03□□□□□ -0.64
VPS37A-207ENST00000520997 PLEKHD1A6NEE1 506 aa11.02□□□□□ -0.65
VPS37A-207ENST00000520997 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
VPS37A-207ENST00000520997 REREQ9P2R6 1566 aa11.01□□□□□ -0.65
VPS37A-207ENST00000520997 ZNF335Q9H4Z2 1342 aaPredicted RBP11□□□□□ -0.65
VPS37A-207ENST00000520997 ZNF518AQ6AHZ1 1483 aa11□□□□□ -0.65
VPS37A-207ENST00000520997 PRXQ9BXM0 1461 aa11□□□□□ -0.65
VPS37A-207ENST00000520997 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
VPS37A-207ENST00000520997 ESF1Q9H501 851 aaKnown RBP10.99□□□□□ -0.65
VPS37A-207ENST00000520997 KDM5CP41229 1560 aa10.99□□□□□ -0.65
VPS37A-207ENST00000520997 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
VPS37A-207ENST00000520997 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
VPS37A-207ENST00000520997 HSPA1LP34931 641 aa10.97□□□□□ -0.65
VPS37A-207ENST00000520997 AGLP35573 1532 aa10.97□□□□□ -0.65
VPS37A-207ENST00000520997 ABCA6Q8N139 1617 aa10.97□□□□□ -0.65
VPS37A-207ENST00000520997 PLCH2O75038 1416 aa10.96□□□□□ -0.65
VPS37A-207ENST00000520997 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.65
VPS37A-207ENST00000520997 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
VPS37A-207ENST00000520997 PLA2R1Q13018 1463 aa10.94□□□□□ -0.66
VPS37A-207ENST00000520997 NPATQ14207 1427 aa10.94□□□□□ -0.66
VPS37A-207ENST00000520997 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
VPS37A-207ENST00000520997 FOXD4L1Q9NU39 408 aa10.94□□□□□ -0.66
VPS37A-207ENST00000520997 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
VPS37A-207ENST00000520997 POLR1AO95602 1720 aaPredicted RBP10.92□□□□□ -0.66
VPS37A-207ENST00000520997 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
VPS37A-207ENST00000520997 TOM1O60784 492 aa10.92□□□□□ -0.66
VPS37A-207ENST00000520997 PKD2Q13563 968 aa10.92□□□□□ -0.66
VPS37A-207ENST00000520997 CPS1P31327 1500 aa10.92□□□□□ -0.66
VPS37A-207ENST00000520997 CEP170BQ9Y4F5 1589 aaPredicted RBP10.91□□□□□ -0.66
VPS37A-207ENST00000520997 ARHGAP5Q13017 1502 aa10.91□□□□□ -0.66
VPS37A-207ENST00000520997 CDK13Q14004 1512 aaKnown RBP10.91□□□□□ -0.66
VPS37A-207ENST00000520997 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
VPS37A-207ENST00000520997 TCOF1Q13428 1488 aaKnown RBP10.91□□□□□ -0.66
VPS37A-207ENST00000520997 KIF14Q15058 1648 aa10.9□□□□□ -0.66
VPS37A-207ENST00000520997 MLH3Q9UHC1 1453 aa10.89□□□□□ -0.67
VPS37A-207ENST00000520997 CLTCQ00610 1675 aaKnown RBP10.88□□□□□ -0.67
VPS37A-207ENST00000520997 PTPRKQ15262 1439 aa10.87□□□□□ -0.67
VPS37A-207ENST00000520997 POLA2Q14181 598 aa10.87□□□□□ -0.67
VPS37A-207ENST00000520997 AFAP1Q8N556 730 aa10.87□□□□□ -0.67
VPS37A-207ENST00000520997 ITSN2Q9NZM3 1697 aa10.87□□□□□ -0.67
VPS37A-207ENST00000520997 SRCAPQ6ZRS2 3230 aa10.86□□□□□ -0.67
VPS37A-207ENST00000520997 KIDINS220Q9ULH0 1771 aa10.86□□□□□ -0.67
VPS37A-207ENST00000520997 CDC42BPBQ9Y5S2 1711 aa10.85□□□□□ -0.67
VPS37A-207ENST00000520997 POTEHQ6S545 545 aa10.85□□□□□ -0.67
VPS37A-207ENST00000520997 ZMYM3Q14202 1370 aa10.84□□□□□ -0.67
VPS37A-207ENST00000520997 SHANK2Q9UPX8 1470 aa10.84□□□□□ -0.67
VPS37A-207ENST00000520997 ABCC1P33527 1531 aa10.84□□□□□ -0.67
VPS37A-207ENST00000520997 RANGAP1P46060 587 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms