RNA–Protein interactions for RNA: ENST00000518977.5

TNIP1-205, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-205ENST00000518977 TRIM52Q96A61 297 aa29.91■■■□□ 2.38
TNIP1-205ENST00000518977 PPP1R15AO75807 674 aaPredicted RBP29.9■■■□□ 2.38
TNIP1-205ENST00000518977 ITSN2Q9NZM3 1697 aa29.87■■■□□ 2.37
TNIP1-205ENST00000518977 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
TNIP1-205ENST00000518977 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
TNIP1-205ENST00000518977 ROCK1Q13464 1354 aa29.87■■■□□ 2.37
TNIP1-205ENST00000518977 DENND4BO75064 1496 aaPredicted RBP29.85■■■□□ 2.37
TNIP1-205ENST00000518977 TONSLQ96HA7 1378 aa29.83■■■□□ 2.37
TNIP1-205ENST00000518977 SHROOM2Q13796 1616 aa29.83■■■□□ 2.37
TNIP1-205ENST00000518977 ACIN1Q9UKV3 1341 aaKnown RBP29.8■■■□□ 2.36
TNIP1-205ENST00000518977 MPHOSPH9Q99550 1183 aa29.79■■■□□ 2.36
TNIP1-205ENST00000518977 ABCC10Q5T3U5 1492 aa29.78■■■□□ 2.36
TNIP1-205ENST00000518977 ERCC6L2Q5T890 1561 aa29.78■■■□□ 2.36
TNIP1-205ENST00000518977 CDC42BPAQ5VT25 1732 aa29.77■■■□□ 2.36
TNIP1-205ENST00000518977 SCAF1Q9H7N4 1312 aaKnown RBP29.77■■■□□ 2.36
TNIP1-205ENST00000518977 YTHDC1Q96MU7 727 aaKnown RBP29.76■■■□□ 2.36
TNIP1-205ENST00000518977 CENPBP07199 599 aaPredicted RBP29.75■■■□□ 2.35
TNIP1-205ENST00000518977 FOXD1Q16676 465 aa29.72■■■□□ 2.35
TNIP1-205ENST00000518977 NCOA1Q15788 1441 aa29.7■■■□□ 2.35
TNIP1-205ENST00000518977 HIRIP3Q9BW71 556 aaPredicted RBP29.68■■■□□ 2.34
TNIP1-205ENST00000518977 CROCC2H7BZ55 1655 aa29.67■■■□□ 2.34
TNIP1-205ENST00000518977 ADGBQ8N7X0 1667 aa29.66■■■□□ 2.34
TNIP1-205ENST00000518977 KDM5BQ9UGL1 1544 aa29.66■■■□□ 2.34
TNIP1-205ENST00000518977 ADGRL2O95490 1459 aa29.63■■■□□ 2.33
TNIP1-205ENST00000518977 CLASP1Q7Z460 1538 aa29.62■■■□□ 2.33
TNIP1-205ENST00000518977 SLC4A1APQ9BWU0 796 aaKnown RBP29.6■■■□□ 2.33
TNIP1-205ENST00000518977 ANKRD30AQ9BXX3 1397 aa29.59■■■□□ 2.33
TNIP1-205ENST00000518977 ABCC2Q92887 1545 aa29.57■■■□□ 2.32
TNIP1-205ENST00000518977 HNRNPMP52272 730 aaKnown RBP eCLIP29.57■■■□□ 2.321e-6■■■■□ 22.9
TNIP1-205ENST00000518977 ANKRD30BQ9BXX2 1392 aa29.56■■■□□ 2.32
TNIP1-205ENST00000518977 DDX10Q13206 875 aaKnown RBP29.55■■■□□ 2.32
TNIP1-205ENST00000518977 CDC42BPBQ9Y5S2 1711 aa29.55■■■□□ 2.32
TNIP1-205ENST00000518977 C9orf84Q5VXU9 1444 aa29.53■■■□□ 2.32
TNIP1-205ENST00000518977 PZPP20742 1482 aa29.53■■■□□ 2.32
TNIP1-205ENST00000518977 TSPY4P0CV99 314 aa29.51■■■□□ 2.31
TNIP1-205ENST00000518977 TSPY10P0CW01 314 aa29.51■■■□□ 2.31
TNIP1-205ENST00000518977 SHANK2Q9UPX8 1470 aa29.51■■■□□ 2.31
TNIP1-205ENST00000518977 PREX2Q70Z35 1606 aa29.5■■■□□ 2.31
TNIP1-205ENST00000518977 L3MBTL2Q969R5 705 aa29.5■■■□□ 2.31
TNIP1-205ENST00000518977 MBD5Q9P267 1494 aa29.5■■■□□ 2.31
TNIP1-205ENST00000518977 ANKRD50Q9ULJ7 1429 aa29.5■■■□□ 2.31
TNIP1-205ENST00000518977 SAMD9LQ8IVG5 1584 aa29.49■■■□□ 2.31
TNIP1-205ENST00000518977 TTC37Q6PGP7 1564 aa29.48■■■□□ 2.31
TNIP1-205ENST00000518977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.47■■■□□ 2.312e-7■■■□□ 19.1
TNIP1-205ENST00000518977 KCNH8Q96L42 1107 aa29.47■■■□□ 2.31
TNIP1-205ENST00000518977 RPRD2Q5VT52 1461 aaKnown RBP29.46■■■□□ 2.31
TNIP1-205ENST00000518977 ARHGEF5Q12774 1597 aa29.46■■■□□ 2.31
TNIP1-205ENST00000518977 GTF3C3Q9Y5Q9 886 aa29.41■■■□□ 2.3
TNIP1-205ENST00000518977 ZCCHC11Q5TAX3 1644 aaKnown RBP29.4■■■□□ 2.3
TNIP1-205ENST00000518977 ARHGAP5Q13017 1502 aa29.4■■■□□ 2.3
TNIP1-205ENST00000518977 CCDC141Q6ZP82 1450 aa29.39■■■□□ 2.3
TNIP1-205ENST00000518977 PKD2Q13563 968 aa29.39■■■□□ 2.29
TNIP1-205ENST00000518977 KIF15Q9NS87 1388 aa29.38■■■□□ 2.29
TNIP1-205ENST00000518977 UHRF1BP1LA0JNW5 1464 aa29.38■■■□□ 2.29
TNIP1-205ENST00000518977 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
TNIP1-205ENST00000518977 SYCP2Q9BX26 1530 aa29.35■■■□□ 2.29
TNIP1-205ENST00000518977 TEX14Q8IWB6 1497 aa29.35■■■□□ 2.29
TNIP1-205ENST00000518977 NUP155O75694 1391 aa29.35■■■□□ 2.29
TNIP1-205ENST00000518977 RSPH4AQ5TD94 716 aa29.35■■■□□ 2.29
TNIP1-205ENST00000518977 MYO5CQ9NQX4 1742 aa29.34■■■□□ 2.29
TNIP1-205ENST00000518977 HSPA5P11021 654 aaKnown RBP29.32■■■□□ 2.28
TNIP1-205ENST00000518977 NBPF8Q3BBV2 869 aa29.32■■■□□ 2.28
TNIP1-205ENST00000518977 EIF4G2P78344 907 aaKnown RBP eCLIP29.25■■■□□ 2.27
TNIP1-205ENST00000518977 PLCH2O75038 1416 aa29.25■■■□□ 2.27
TNIP1-205ENST00000518977 KDM5DQ9BY66 1539 aa29.24■■■□□ 2.27
TNIP1-205ENST00000518977 ARHGEF12Q9NZN5 1544 aa29.23■■■□□ 2.27
TNIP1-205ENST00000518977 MAST1Q9Y2H9 1570 aa29.21■■■□□ 2.27
TNIP1-205ENST00000518977 PLEKHH2Q8IVE3 1493 aa29.2■■■□□ 2.27
TNIP1-205ENST00000518977 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
TNIP1-205ENST00000518977 WASHC2AQ641Q2 1341 aa29.19■■■□□ 2.26
TNIP1-205ENST00000518977 ANP32CO43423 234 aa29.16■■■□□ 2.26
TNIP1-205ENST00000518977 FAM135AQ9P2D6 1515 aa29.12■■■□□ 2.25
TNIP1-205ENST00000518977 C11orf95C9JLR9 678 aaPredicted RBP29.11■■■□□ 2.25
TNIP1-205ENST00000518977 PLXNC1O60486 1568 aa29.1■■■□□ 2.25
TNIP1-205ENST00000518977 OSCARQ8IYS5 282 aa29.09■■■□□ 2.25
TNIP1-205ENST00000518977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.09■■■□□ 2.251e-6■■■□□ 15.7
TNIP1-205ENST00000518977 TRAPPC8Q9Y2L5 1435 aa29.09■■■□□ 2.25
TNIP1-205ENST00000518977 ABCC1P33527 1531 aa29.09■■■□□ 2.25
TNIP1-205ENST00000518977 ZNF326Q5BKZ1 582 aaKnown RBP29.09■■■□□ 2.25
TNIP1-205ENST00000518977 WDR7Q9Y4E6 1490 aa29.09■■■□□ 2.25
TNIP1-205ENST00000518977 SPATA31E1Q6ZUB1 1445 aa29.06■■■□□ 2.24
TNIP1-205ENST00000518977 UNC13BO14795 1591 aa29.05■■■□□ 2.24
TNIP1-205ENST00000518977 CCER2I3L3R5 266 aa29.05■■■□□ 2.24
TNIP1-205ENST00000518977 DUOX2Q9NRD8 1548 aa29.03■■■□□ 2.24
TNIP1-205ENST00000518977 AFAP1Q8N556 730 aa29.02■■■□□ 2.24
TNIP1-205ENST00000518977 CCDC7Q96M83 1385 aa29■■■□□ 2.23
TNIP1-205ENST00000518977 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
TNIP1-205ENST00000518977 KDM2AQ9Y2K7 1162 aa28.97■■■□□ 2.23
TNIP1-205ENST00000518977 ASXL2Q76L83 1435 aa28.97■■■□□ 2.23
TNIP1-205ENST00000518977 ERBINQ96RT1 1412 aa28.96■■■□□ 2.23
TNIP1-205ENST00000518977 SPAG9O60271 1321 aaKnown RBP28.96■■■□□ 2.23
TNIP1-205ENST00000518977 UHRF1BP1Q6BDS2 1440 aa28.96■■■□□ 2.23
TNIP1-205ENST00000518977 IQGAP3Q86VI3 1631 aa28.95■■■□□ 2.22
TNIP1-205ENST00000518977 ABCA9Q8IUA7 1624 aa28.95■■■□□ 2.22
TNIP1-205ENST00000518977 DCAF11Q8TEB1 546 aa28.94■■■□□ 2.22
TNIP1-205ENST00000518977 FANCAO15360 1455 aa28.94■■■□□ 2.22
TNIP1-205ENST00000518977 PLA2R1Q13018 1463 aa28.93■■■□□ 2.22
TNIP1-205ENST00000518977 KIF7Q2M1P5 1343 aa28.92■■■□□ 2.22
TNIP1-205ENST00000518977 CNTLNQ9NXG0 1405 aa28.92■■■□□ 2.22
TNIP1-205ENST00000518977 CCDC144AA2RUR9 1427 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms