RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
CTNNA1-210ENST00000518825 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-210ENST00000518825 ANKRD30BQ9BXX2 1392 aa11.9□□□□□ -0.51
CTNNA1-210ENST00000518825 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
CTNNA1-210ENST00000518825 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
CTNNA1-210ENST00000518825 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-210ENST00000518825 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
CTNNA1-210ENST00000518825 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
CTNNA1-210ENST00000518825 TEX14Q8IWB6 1497 aa11.88□□□□□ -0.51
CTNNA1-210ENST00000518825 RPRD2Q5VT52 1461 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-210ENST00000518825 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
CTNNA1-210ENST00000518825 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-210ENST00000518825 CEP170Q5SW79 1584 aa11.86□□□□□ -0.51
CTNNA1-210ENST00000518825 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
CTNNA1-210ENST00000518825 NCOA1Q15788 1441 aa11.84□□□□□ -0.51
CTNNA1-210ENST00000518825 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■□□ 17.4
CTNNA1-210ENST00000518825 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
CTNNA1-210ENST00000518825 PZPP20742 1482 aa11.84□□□□□ -0.51
CTNNA1-210ENST00000518825 KIF14Q15058 1648 aa11.84□□□□□ -0.51
CTNNA1-210ENST00000518825 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
CTNNA1-210ENST00000518825 CAMSAP2Q08AD1 1489 aa11.82□□□□□ -0.52
CTNNA1-210ENST00000518825 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-210ENST00000518825 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
CTNNA1-210ENST00000518825 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-210ENST00000518825 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
CTNNA1-210ENST00000518825 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-210ENST00000518825 ADCY10Q96PN6 1610 aa11.79□□□□□ -0.52
CTNNA1-210ENST00000518825 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-210ENST00000518825 CROCC2H7BZ55 1655 aa11.78□□□□□ -0.52
CTNNA1-210ENST00000518825 SYNJ2O15056 1496 aa11.78□□□□□ -0.52
CTNNA1-210ENST00000518825 MBD5Q9P267 1494 aa11.78□□□□□ -0.52
CTNNA1-210ENST00000518825 PRKRIP1Q9H875 184 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-210ENST00000518825 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.52
CTNNA1-210ENST00000518825 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.52
CTNNA1-210ENST00000518825 ADGRL2O95490 1459 aa11.77□□□□□ -0.53
CTNNA1-210ENST00000518825 ADGBQ8N7X0 1667 aa11.77□□□□□ -0.53
CTNNA1-210ENST00000518825 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-210ENST00000518825 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-210ENST00000518825 ITSN2Q9NZM3 1697 aa11.76□□□□□ -0.53
CTNNA1-210ENST00000518825 NUP160Q12769 1436 aa11.76□□□□□ -0.53
CTNNA1-210ENST00000518825 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-210ENST00000518825 BCORL1Q5H9F3 1711 aa11.75□□□□□ -0.53
CTNNA1-210ENST00000518825 NEFLP07196 543 aa11.74□□□□□ -0.53
CTNNA1-210ENST00000518825 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
CTNNA1-210ENST00000518825 ZNF777Q9ULD5 760 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-210ENST00000518825 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
CTNNA1-210ENST00000518825 KIAA1107Q9UPP5 1409 aa11.73□□□□□ -0.53
CTNNA1-210ENST00000518825 ABCC10Q5T3U5 1492 aa11.73□□□□□ -0.53
CTNNA1-210ENST00000518825 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-210ENST00000518825 ABCA8O94911 1581 aa11.73□□□□□ -0.53
CTNNA1-210ENST00000518825 FBLN2P98095 1184 aa11.73□□□□□ -0.53
CTNNA1-210ENST00000518825 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
CTNNA1-210ENST00000518825 ATP10BO94823 1461 aa11.72□□□□□ -0.53
CTNNA1-210ENST00000518825 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-210ENST00000518825 DHX29Q7Z478 1369 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-210ENST00000518825 PKD2Q13563 968 aa11.71□□□□□ -0.53
CTNNA1-210ENST00000518825 ANKRD50Q9ULJ7 1429 aa11.7□□□□□ -0.54
CTNNA1-210ENST00000518825 FAM9BQ8IZU0 186 aa11.7□□□□□ -0.54
CTNNA1-210ENST00000518825 KDM5CP41229 1560 aa11.69□□□□□ -0.54
CTNNA1-210ENST00000518825 CARMIL2Q6F5E8 1435 aa11.69□□□□□ -0.54
CTNNA1-210ENST00000518825 ANKRD30AQ9BXX3 1397 aa11.69□□□□□ -0.54
CTNNA1-210ENST00000518825 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
CTNNA1-210ENST00000518825 USP47Q96K76 1375 aa11.68□□□□□ -0.54
CTNNA1-210ENST00000518825 C9orf84Q5VXU9 1444 aa11.67□□□□□ -0.54
CTNNA1-210ENST00000518825 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
CTNNA1-210ENST00000518825 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
CTNNA1-210ENST00000518825 ZBED9Q6R2W3 1325 aa11.66□□□□□ -0.54
CTNNA1-210ENST00000518825 KDM5DQ9BY66 1539 aa11.65□□□□□ -0.54
CTNNA1-210ENST00000518825 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-210ENST00000518825 ANP32EQ9BTT0 268 aa11.65□□□□□ -0.54
CTNNA1-210ENST00000518825 NUP155O75694 1391 aa11.65□□□□□ -0.54
CTNNA1-210ENST00000518825 PLEKHD1A6NEE1 506 aa11.65□□□□□ -0.54
CTNNA1-210ENST00000518825 PTPRGP23470 1445 aa11.64□□□□□ -0.55
CTNNA1-210ENST00000518825 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.553e-6■■■■□ 24.9
CTNNA1-210ENST00000518825 RALGAPBQ86X10 1494 aa11.63□□□□□ -0.55
CTNNA1-210ENST00000518825 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
CTNNA1-210ENST00000518825 CDC42BPBQ9Y5S2 1711 aa11.62□□□□□ -0.55
CTNNA1-210ENST00000518825 MSH5O43196 834 aa11.61□□□□□ -0.55
CTNNA1-210ENST00000518825 ARHGEF5Q12774 1597 aa11.61□□□□□ -0.55
CTNNA1-210ENST00000518825 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
CTNNA1-210ENST00000518825 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
CTNNA1-210ENST00000518825 ARHGEF12Q9NZN5 1544 aa11.61□□□□□ -0.55
CTNNA1-210ENST00000518825 PREX2Q70Z35 1606 aa11.58□□□□□ -0.56
CTNNA1-210ENST00000518825 POLR3GLQ9BT43 218 aa11.58□□□□□ -0.56
CTNNA1-210ENST00000518825 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
CTNNA1-210ENST00000518825 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 ST20-MTHFSA0A0A6YYL1 179 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 ERICH6BQ5W0A0 696 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 PPP4R2Q9NY27 417 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 FAM135AQ9P2D6 1515 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
CTNNA1-210ENST00000518825 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
CTNNA1-210ENST00000518825 DCAF11Q8TEB1 546 aa11.56□□□□□ -0.56
CTNNA1-210ENST00000518825 CCDC141Q6ZP82 1450 aa11.56□□□□□ -0.56
CTNNA1-210ENST00000518825 E9PCH4 1651 aa11.56□□□□□ -0.56
CTNNA1-210ENST00000518825 TTC37Q6PGP7 1564 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms