RNA–Protein interactions for RNA: ENST00000518365.1

LGI3-204, Transcript of leucine rich repeat LGI family member 3, human

TSL 3

Gene LGI3, Length 784 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI3-204	ENST00000518365	EEA1	Q15075	1411 aa		41.17	■■■■■ 4.18
LGI3-204	ENST00000518365	PLCH2	O75038	1416 aa		41.14	■■■■■ 4.18
LGI3-204	ENST00000518365	CERK	Q8TCT0	537 aa		41.12	■■■■■ 4.17
LGI3-204	ENST00000518365	ARHGEF12	Q9NZN5	1544 aa		41.09	■■■■■ 4.17
LGI3-204	ENST00000518365	MYO5C	Q9NQX4	1742 aa		41.08	■■■■■ 4.17
LGI3-204	ENST00000518365	PREX1	Q8TCU6	1659 aa		41.04	■■■■■ 4.16
LGI3-204	ENST00000518365	ATP10A	O60312	1499 aa		41.04	■■■■■ 4.16
LGI3-204	ENST00000518365	CEBPA	P49715	358 aa	Predicted RBP	41.04	■■■■■ 4.16
LGI3-204	ENST00000518365	KIF14	Q15058	1648 aa		41.03	■■■■■ 4.16
LGI3-204	ENST00000518365	STRC	Q7RTU9	1775 aa		41.02	■■■■■ 4.16
LGI3-204	ENST00000518365	C9orf84	Q5VXU9	1444 aa		40.98	■■■■■ 4.15
LGI3-204	ENST00000518365	EHMT2	Q96KQ7	1210 aa		40.96	■■■■■ 4.15
LGI3-204	ENST00000518365	LRRIQ1	Q96JM4	1722 aa		40.95	■■■■■ 4.15
LGI3-204	ENST00000518365	ATP1B4	Q9UN42	357 aa	Predicted RBP	40.94	■■■■■ 4.14
LGI3-204	ENST00000518365	EFCAB2	Q5VUJ9	269 aa		40.91	■■■■■ 4.14
LGI3-204	ENST00000518365	AFAP1	Q8N556	730 aa		40.87	■■■■■ 4.13
LGI3-204	ENST00000518365	ARHGAP35	Q9NRY4	1499 aa		40.87	■■■■■ 4.13
LGI3-204	ENST00000518365	SETD1B	Q9UPS6	1966 aa	Known RBP	40.86	■■■■■ 4.13
LGI3-204	ENST00000518365	KDM5C	P41229	1560 aa		40.86	■■■■■ 4.13
LGI3-204	ENST00000518365	CDC42BPB	Q9Y5S2	1711 aa		40.83	■■■■■ 4.13
LGI3-204	ENST00000518365	DIP2C	Q9Y2E4	1556 aa		40.82	■■■■■ 4.13
LGI3-204	ENST00000518365	ZNF518A	Q6AHZ1	1483 aa		40.81	■■■■■ 4.12
LGI3-204	ENST00000518365	ARHGAP5	Q13017	1502 aa		40.8	■■■■■ 4.12
LGI3-204	ENST00000518365	FMN1	Q68DA7	1419 aa		40.8	■■■■■ 4.12
LGI3-204	ENST00000518365	C3	P01024	1663 aa		40.78	■■■■■ 4.12
LGI3-204	ENST00000518365	ABCA6	Q8N139	1617 aa		40.78	■■■■■ 4.12
LGI3-204	ENST00000518365	TRO	Q12816	1431 aa	Predicted RBP	40.76	■■■■■ 4.12
LGI3-204	ENST00000518365	UBTF	P17480	764 aa	Known RBP	40.75	■■■■■ 4.11
LGI3-204	ENST00000518365	ILDR2	Q71H61	639 aa		40.72	■■■■■ 4.11
LGI3-204	ENST00000518365	UHRF1BP1	Q6BDS2	1440 aa		40.7	■■■■■ 4.11
LGI3-204	ENST00000518365	CDK11A	Q9UQ88	783 aa	Predicted RBP	40.7	■■■■■ 4.11
LGI3-204	ENST00000518365	RERE	Q9P2R6	1566 aa		40.69	■■■■■ 4.1
LGI3-204	ENST00000518365	MYT1L	Q9UL68	1186 aa		40.67	■■■■■ 4.1
LGI3-204	ENST00000518365	TRAPPC8	Q9Y2L5	1435 aa		40.64	■■■■■ 4.1
LGI3-204	ENST00000518365	DMRT2	Q9Y5R5	561 aa		40.62	■■■■■ 4.09
LGI3-204	ENST00000518365	MLH3	Q9UHC1	1453 aa		40.62	■■■■■ 4.09
LGI3-204	ENST00000518365	ITSN2	Q9NZM3	1697 aa		40.62	■■■■■ 4.09
LGI3-204	ENST00000518365	PREX2	Q70Z35	1606 aa		40.61	■■■■■ 4.09
LGI3-204	ENST00000518365	DISP3	Q9P2K9	1392 aa		40.61	■■■■■ 4.09
LGI3-204	ENST00000518365	KIDINS220	Q9ULH0	1771 aa		40.59	■■■■■ 4.09
LGI3-204	ENST00000518365	ABCC1	P33527	1531 aa		40.59	■■■■■ 4.09
LGI3-204	ENST00000518365	CLIP1	P30622	1438 aa		40.59	■■■■■ 4.09
LGI3-204	ENST00000518365	AGL	P35573	1532 aa		40.56	■■■■■ 4.08
LGI3-204	ENST00000518365	CDC42BPA	Q5VT25	1732 aa		40.54	■■■■■ 4.08
LGI3-204	ENST00000518365	LTBP4	Q8N2S1	1624 aa		40.53	■■■■■ 4.08
LGI3-204	ENST00000518365	PTPRT	O14522	1441 aa		40.53	■■■■■ 4.08
LGI3-204	ENST00000518365	NCOA1	Q15788	1441 aa		40.41	■■■■■ 4.06
LGI3-204	ENST00000518365	SOCS7	O14512	581 aa		40.39	■■■■■ 4.06
LGI3-204	ENST00000518365	ESF1	Q9H501	851 aa	Known RBP	40.38	■■■■■ 4.05
LGI3-204	ENST00000518365	SPATA31D1	Q6ZQQ2	1576 aa		40.38	■■■■■ 4.05
LGI3-204	ENST00000518365	SAMD9L	Q8IVG5	1584 aa		40.37	■■■■■ 4.05
LGI3-204	ENST00000518365	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.36	■■■■■ 4.05
LGI3-204	ENST00000518365	CASKIN1	Q8WXD9	1431 aa		40.36	■■■■■ 4.05
LGI3-204	ENST00000518365	CAMSAP1	Q5T5Y3	1602 aa		40.34	■■■■■ 4.05
LGI3-204	ENST00000518365	MROH2A	A6NES4	1674 aa		40.34	■■■■■ 4.05
LGI3-204	ENST00000518365	CCDC18	Q5T9S5	1454 aa		40.32	■■■■■ 4.05
LGI3-204	ENST00000518365	CNTLN	Q9NXG0	1405 aa		40.31	■■■■■ 4.04
LGI3-204	ENST00000518365	CHIC1	Q5VXU3	224 aa		40.28	■■■■■ 4.04
LGI3-204	ENST00000518365	SYCP2	Q9BX26	1530 aa		40.27	■■■■■ 4.04
LGI3-204	ENST00000518365	ZNF777	Q9ULD5	760 aa	Predicted RBP	40.27	■■■■■ 4.04
LGI3-204	ENST00000518365	CLTC	Q00610	1675 aa	Known RBP	40.27	■■■■■ 4.04
LGI3-204	ENST00000518365	ZMYM3	Q14202	1370 aa		40.24	■■■■■ 4.03
LGI3-204	ENST00000518365	NCKAP5L	Q9HCH0	1330 aa		40.23	■■■■■ 4.03
LGI3-204	ENST00000518365	IQSEC2	Q5JU85	1478 aa		40.23	■■■■■ 4.03
LGI3-204	ENST00000518365	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.22	■■■■■ 4.03
LGI3-204	ENST00000518365	NPAT	Q14207	1427 aa		40.22	■■■■■ 4.03
LGI3-204	ENST00000518365	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.21	■■■■■ 4.03
LGI3-204	ENST00000518365	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	40.17	■■■■■ 4.02
LGI3-204	ENST00000518365	MYO3A	Q8NEV4	1616 aa		40.16	■■■■■ 4.02
LGI3-204	ENST00000518365	SPAG9	O60271	1321 aa	Known RBP	40.16	■■■■■ 4.02
LGI3-204	ENST00000518365	ZNF142	P52746	1687 aa	Predicted RBP	40.15	■■■■■ 4.02
LGI3-204	ENST00000518365	ATP7A	Q04656	1500 aa		40.15	■■■■■ 4.02
LGI3-204	ENST00000518365	PLXNC1	O60486	1568 aa		40.14	■■■■■ 4.02
LGI3-204	ENST00000518365	INO80	Q9ULG1	1556 aa	Predicted RBP	40.14	■■■■■ 4.02
LGI3-204	ENST00000518365	FYCO1	Q9BQS8	1478 aa		40.13	■■■■■ 4.01
LGI3-204	ENST00000518365	PTPRK	Q15262	1439 aa		40.08	■■■■■ 4.01
LGI3-204	ENST00000518365	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	40.06	■■■■■ 4
LGI3-204	ENST00000518365	A2M	P01023	1474 aa		40.06	■■■■■ 4
LGI3-204	ENST00000518365	TCOF1	Q13428	1488 aa	Known RBP	40.01	■■■■■ 4
LGI3-204	ENST00000518365	GGT6	Q6P531	493 aa		40.01	■■■■■ 4
LGI3-204	ENST00000518365	PLA2R1	Q13018	1463 aa		40	■■■■□ 3.99
LGI3-204	ENST00000518365	KIAA1107	Q9UPP5	1409 aa		40	■■■■□ 3.99
LGI3-204	ENST00000518365	UBAP1L	F5GYI3	381 aa		39.99	■■■■□ 3.99
LGI3-204	ENST00000518365	CFDP1	Q9UEE9	299 aa	Predicted RBP	39.97	■■■■□ 3.99
LGI3-204	ENST00000518365	ADGB	Q8N7X0	1667 aa		39.96	■■■■□ 3.99
LGI3-204	ENST00000518365	PKD2	Q13563	968 aa		39.94	■■■■□ 3.98
LGI3-204	ENST00000518365	ZNF644	Q9H582	1327 aa	Predicted RBP	39.93	■■■■□ 3.98
LGI3-204	ENST00000518365	PLEKHH2	Q8IVE3	1493 aa		39.92	■■■■□ 3.98
LGI3-204	ENST00000518365	CCNB3	Q8WWL7	1395 aa		39.91	■■■■□ 3.98
LGI3-204	ENST00000518365	DNMT1	P26358	1616 aa	Known RBP	39.91	■■■■□ 3.98
LGI3-204	ENST00000518365	TIAM1	Q13009	1591 aa		39.84	■■■■□ 3.97
LGI3-204	ENST00000518365	MBD5	Q9P267	1494 aa		39.83	■■■■□ 3.97
LGI3-204	ENST00000518365	A2ML1	A8K2U0	1454 aa		39.82	■■■■□ 3.97
LGI3-204	ENST00000518365	PPP6R1	Q9UPN7	881 aa		39.82	■■■■□ 3.97
LGI3-204	ENST00000518365	POLR1A	O95602	1720 aa	Predicted RBP	39.82	■■■■□ 3.96
LGI3-204	ENST00000518365	NEURL4	Q96JN8	1562 aa		39.8	■■■■□ 3.96
LGI3-204	ENST00000518365	MTUS2	Q5JR59	1369 aa		39.77	■■■■□ 3.96
LGI3-204	ENST00000518365	FBXO31	Q5XUX0	539 aa	Predicted RBP	39.76	■■■■□ 3.96
LGI3-204	ENST00000518365	HSPA1L	P34931	641 aa		39.7	■■■■□ 3.95
LGI3-204	ENST00000518365	DHX29	Q7Z478	1369 aa	Known RBP	39.7	■■■■□ 3.95

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms