RNA–Protein interactions for RNA: ENST00000518343.5

MSR1-208, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-208ENST00000518343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
MSR1-208ENST00000518343 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
MSR1-208ENST00000518343 ZMYM4Q5VZL5 1548 aa9.59□□□□□ -0.87
MSR1-208ENST00000518343 SAMD9Q5K651 1589 aa9.58□□□□□ -0.88
MSR1-208ENST00000518343 FRMPD1Q5SYB0 1578 aa9.58□□□□□ -0.88
MSR1-208ENST00000518343 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
MSR1-208ENST00000518343 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
MSR1-208ENST00000518343 RIMS1Q86UR5 1692 aaKnown RBP9.56□□□□□ -0.88
MSR1-208ENST00000518343 CERKQ8TCT0 537 aa9.56□□□□□ -0.88
MSR1-208ENST00000518343 EEA1Q15075 1411 aa9.56□□□□□ -0.88
MSR1-208ENST00000518343 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
MSR1-208ENST00000518343 TTC37Q6PGP7 1564 aa9.54□□□□□ -0.88
MSR1-208ENST00000518343 SETD1BQ9UPS6 1966 aaKnown RBP9.54□□□□□ -0.88
MSR1-208ENST00000518343 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
MSR1-208ENST00000518343 PREX1Q8TCU6 1659 aa9.52□□□□□ -0.89
MSR1-208ENST00000518343 CSRNP3Q8WYN3 585 aa9.52□□□□□ -0.89
MSR1-208ENST00000518343 SPINK5Q9NQ38 1064 aaPredicted RBP9.52□□□□□ -0.89
MSR1-208ENST00000518343 YEATS2Q9ULM3 1422 aa9.52□□□□□ -0.89
MSR1-208ENST00000518343 CDK11AQ9UQ88 783 aaPredicted RBP9.52□□□□□ -0.89
MSR1-208ENST00000518343 FER1L4A9Z1Z3 1794 aa9.52□□□□□ -0.89
MSR1-208ENST00000518343 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
MSR1-208ENST00000518343 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
MSR1-208ENST00000518343 C9orf84Q5VXU9 1444 aa9.5□□□□□ -0.89
MSR1-208ENST00000518343 SOCS7O14512 581 aa9.5□□□□□ -0.89
MSR1-208ENST00000518343 ATP10AO60312 1499 aa9.5□□□□□ -0.89
MSR1-208ENST00000518343 IQSEC2Q5JU85 1478 aa9.5□□□□□ -0.89
MSR1-208ENST00000518343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.5□□□□□ -0.89
MSR1-208ENST00000518343 PLCH2O75038 1416 aa9.49□□□□□ -0.89
MSR1-208ENST00000518343 ARHGEF12Q9NZN5 1544 aa9.49□□□□□ -0.89
MSR1-208ENST00000518343 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
MSR1-208ENST00000518343 ZNF518AQ6AHZ1 1483 aa9.48□□□□□ -0.89
MSR1-208ENST00000518343 DSG3P32926 999 aa9.48□□□□□ -0.89
MSR1-208ENST00000518343 HSPA2P54652 639 aa9.48□□□□□ -0.89
MSR1-208ENST00000518343 EFCAB2Q5VUJ9 269 aa9.48□□□□□ -0.89
MSR1-208ENST00000518343 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
MSR1-208ENST00000518343 HECW1Q76N89 1606 aa9.47□□□□□ -0.89
MSR1-208ENST00000518343 PTPRTO14522 1441 aa9.47□□□□□ -0.89
MSR1-208ENST00000518343 SCAPERQ9BY12 1400 aa9.47□□□□□ -0.89
MSR1-208ENST00000518343 KCNA4P22459 653 aa9.46□□□□□ -0.9
MSR1-208ENST00000518343 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
MSR1-208ENST00000518343 FMN1Q68DA7 1419 aa9.46□□□□□ -0.9
MSR1-208ENST00000518343 REREQ9P2R6 1566 aa9.46□□□□□ -0.9
MSR1-208ENST00000518343 POTEHQ6S545 545 aa9.45□□□□□ -0.9
MSR1-208ENST00000518343 MYO5CQ9NQX4 1742 aa9.45□□□□□ -0.9
MSR1-208ENST00000518343 CLIP1P30622 1438 aa9.44□□□□□ -0.9
MSR1-208ENST00000518343 CNTLNQ9NXG0 1405 aa9.44□□□□□ -0.9
MSR1-208ENST00000518343 KDM5CP41229 1560 aa9.42□□□□□ -0.9
MSR1-208ENST00000518343 CAPN15O75808 1086 aa9.42□□□□□ -0.9
MSR1-208ENST00000518343 MLECQ14165 292 aa9.42□□□□□ -0.9
MSR1-208ENST00000518343 KIF14Q15058 1648 aa9.42□□□□□ -0.9
MSR1-208ENST00000518343 AGLP35573 1532 aa9.41□□□□□ -0.9
MSR1-208ENST00000518343 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
MSR1-208ENST00000518343 SPATA31D1Q6ZQQ2 1576 aa9.41□□□□□ -0.9
MSR1-208ENST00000518343 MLH3Q9UHC1 1453 aa9.4□□□□□ -0.9
MSR1-208ENST00000518343 STRCQ7RTU9 1775 aa9.4□□□□□ -0.9
MSR1-208ENST00000518343 NPATQ14207 1427 aa9.39□□□□□ -0.91
MSR1-208ENST00000518343 SIGLEC1Q9BZZ2 1709 aa9.39□□□□□ -0.91
MSR1-208ENST00000518343 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
MSR1-208ENST00000518343 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
MSR1-208ENST00000518343 TROQ12816 1431 aaPredicted RBP9.38□□□□□ -0.91
MSR1-208ENST00000518343 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
MSR1-208ENST00000518343 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
MSR1-208ENST00000518343 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
MSR1-208ENST00000518343 PKD2Q13563 968 aa9.36□□□□□ -0.91
MSR1-208ENST00000518343 NCOA1Q15788 1441 aa9.36□□□□□ -0.91
MSR1-208ENST00000518343 DIP2CQ9Y2E4 1556 aa9.36□□□□□ -0.91
MSR1-208ENST00000518343 C3P01024 1663 aa9.36□□□□□ -0.91
MSR1-208ENST00000518343 CCDC18Q5T9S5 1454 aa9.34□□□□□ -0.91
MSR1-208ENST00000518343 RANGAP1P46060 587 aaPredicted RBP9.34□□□□□ -0.91
MSR1-208ENST00000518343 CEBPAP49715 358 aaPredicted RBP9.34□□□□□ -0.91
MSR1-208ENST00000518343 ILDR2Q71H61 639 aa9.34□□□□□ -0.91
MSR1-208ENST00000518343 LTBP4Q8N2S1 1624 aa9.34□□□□□ -0.91
MSR1-208ENST00000518343 PLA2R1Q13018 1463 aa9.34□□□□□ -0.91
MSR1-208ENST00000518343 AFAP1Q8N556 730 aa9.33□□□□□ -0.92
MSR1-208ENST00000518343 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
MSR1-208ENST00000518343 PREX2Q70Z35 1606 aa9.32□□□□□ -0.92
MSR1-208ENST00000518343 ABCC1P33527 1531 aa9.31□□□□□ -0.92
MSR1-208ENST00000518343 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
MSR1-208ENST00000518343 ABCA6Q8N139 1617 aa9.31□□□□□ -0.92
MSR1-208ENST00000518343 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
MSR1-208ENST00000518343 CDC42BPBQ9Y5S2 1711 aa9.3□□□□□ -0.92
MSR1-208ENST00000518343 CAMSAP1Q5T5Y3 1602 aa9.3□□□□□ -0.92
MSR1-208ENST00000518343 ZNF142P52746 1687 aaPredicted RBP9.29□□□□□ -0.92
MSR1-208ENST00000518343 ITSN2Q9NZM3 1697 aa9.29□□□□□ -0.92
MSR1-208ENST00000518343 ZMYM3Q14202 1370 aa9.29□□□□□ -0.92
MSR1-208ENST00000518343 FAM135AQ9P2D6 1515 aa9.28□□□□□ -0.92
MSR1-208ENST00000518343 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
MSR1-208ENST00000518343 KIAA1107Q9UPP5 1409 aa9.28□□□□□ -0.92
MSR1-208ENST00000518343 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
MSR1-208ENST00000518343 KIDINS220Q9ULH0 1771 aa9.27□□□□□ -0.92
MSR1-208ENST00000518343 TOM1O60784 492 aa9.27□□□□□ -0.93
MSR1-208ENST00000518343 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
MSR1-208ENST00000518343 SUPT6HQ7KZ85 1726 aaKnown RBP9.27□□□□□ -0.93
MSR1-208ENST00000518343 SPAG9O60271 1321 aaKnown RBP9.27□□□□□ -0.93
MSR1-208ENST00000518343 TCOF1Q13428 1488 aaKnown RBP9.27□□□□□ -0.93
MSR1-208ENST00000518343 CPS1P31327 1500 aa9.26□□□□□ -0.93
MSR1-208ENST00000518343 ABCB7O75027 752 aa9.26□□□□□ -0.93
MSR1-208ENST00000518343 SAMD9LQ8IVG5 1584 aa9.25□□□□□ -0.93
MSR1-208ENST00000518343 CEP170BQ9Y4F5 1589 aaPredicted RBP9.24□□□□□ -0.93
MSR1-208ENST00000518343 MYO3AQ8NEV4 1616 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms