RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA1-202ENST00000517417 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
PCDHGA1-202ENST00000517417 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
PCDHGA1-202ENST00000517417 FGD6Q6ZV73 1430 aa14.31□□□□□ -0.12
PCDHGA1-202ENST00000517417 UPF2Q9HAU5 1272 aaKnown RBP14.3□□□□□ -0.12
PCDHGA1-202ENST00000517417 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
PCDHGA1-202ENST00000517417 UACAQ9BZF9 1416 aa14.3□□□□□ -0.12
PCDHGA1-202ENST00000517417 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
PCDHGA1-202ENST00000517417 PRKRIP1Q9H875 184 aaPredicted RBP14.29□□□□□ -0.12
PCDHGA1-202ENST00000517417 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDHGA1-202ENST00000517417 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.13
PCDHGA1-202ENST00000517417 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
PCDHGA1-202ENST00000517417 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
PCDHGA1-202ENST00000517417 MSH5O43196 834 aa14.25□□□□□ -0.13
PCDHGA1-202ENST00000517417 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
PCDHGA1-202ENST00000517417 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
PCDHGA1-202ENST00000517417 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
PCDHGA1-202ENST00000517417 NUDCQ9Y266 331 aa14.24□□□□□ -0.13
PCDHGA1-202ENST00000517417 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
PCDHGA1-202ENST00000517417 PPM1GO15355 546 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA1-202ENST00000517417 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
PCDHGA1-202ENST00000517417 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
PCDHGA1-202ENST00000517417 DCAF11Q8TEB1 546 aa14.21□□□□□ -0.13
PCDHGA1-202ENST00000517417 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
PCDHGA1-202ENST00000517417 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
PCDHGA1-202ENST00000517417 ARXQ96QS3 562 aa14.21□□□□□ -0.13
PCDHGA1-202ENST00000517417 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.14
PCDHGA1-202ENST00000517417 MAP3K1Q13233 1512 aa14.2□□□□□ -0.14
PCDHGA1-202ENST00000517417 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
PCDHGA1-202ENST00000517417 TNNT2P45379 298 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA1-202ENST00000517417 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
PCDHGA1-202ENST00000517417 PCF11O94913 1555 aaKnown RBP14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 CCDC184Q52MB2 194 aa14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 CC2D1BQ5T0F9 858 aaKnown RBP14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 HFM1A2PYH4 1435 aa14.18□□□□□ -0.14
PCDHGA1-202ENST00000517417 NCOA2Q15596 1464 aa14.17□□□□□ -0.14
PCDHGA1-202ENST00000517417 JPH4Q96JJ6 628 aa14.17□□□□□ -0.14
PCDHGA1-202ENST00000517417 CUL7Q14999 1698 aa14.17□□□□□ -0.14
PCDHGA1-202ENST00000517417 DDRGK1Q96HY6 314 aa14.17□□□□□ -0.14
PCDHGA1-202ENST00000517417 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA1-202ENST00000517417 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
PCDHGA1-202ENST00000517417 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA1-202ENST00000517417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
PCDHGA1-202ENST00000517417 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
PCDHGA1-202ENST00000517417 PKD2Q13563 968 aa14.14□□□□□ -0.15
PCDHGA1-202ENST00000517417 KIF7Q2M1P5 1343 aa14.14□□□□□ -0.15
PCDHGA1-202ENST00000517417 EIF5BO60841 1220 aaKnown RBP14.13□□□□□ -0.15
PCDHGA1-202ENST00000517417 TARBP1Q13395 1621 aaKnown RBP14.13□□□□□ -0.15
PCDHGA1-202ENST00000517417 A0A0G2JS52 829 aa14.13□□□□□ -0.15
PCDHGA1-202ENST00000517417 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
PCDHGA1-202ENST00000517417 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
PCDHGA1-202ENST00000517417 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
PCDHGA1-202ENST00000517417 NAIPQ13075 1403 aa14.11□□□□□ -0.15
PCDHGA1-202ENST00000517417 ANP32BQ92688 251 aaKnown RBP14.1□□□□□ -0.15
PCDHGA1-202ENST00000517417 TCERG1O14776 1098 aaKnown RBP14.1□□□□□ -0.15
PCDHGA1-202ENST00000517417 POGKQ9P215 609 aa14.1□□□□□ -0.15
PCDHGA1-202ENST00000517417 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
PCDHGA1-202ENST00000517417 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.15
PCDHGA1-202ENST00000517417 FRAT1Q92837 279 aaPredicted RBP14.08□□□□□ -0.16
PCDHGA1-202ENST00000517417 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
PCDHGA1-202ENST00000517417 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCDHGA1-202ENST00000517417 USP47Q96K76 1375 aa14.07□□□□□ -0.16
PCDHGA1-202ENST00000517417 RALBP1Q15311 655 aa14.07□□□□□ -0.16
PCDHGA1-202ENST00000517417 MLECQ14165 292 aa14.06□□□□□ -0.16
PCDHGA1-202ENST00000517417 NBPF8Q3BBV2 869 aa14.06□□□□□ -0.16
PCDHGA1-202ENST00000517417 GGT6Q6P531 493 aa14.06□□□□□ -0.16
PCDHGA1-202ENST00000517417 AKNAQ7Z591 1439 aa14.06□□□□□ -0.16
PCDHGA1-202ENST00000517417 RGS3P49796 1198 aa14.05□□□□□ -0.16
PCDHGA1-202ENST00000517417 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
PCDHGA1-202ENST00000517417 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA1-202ENST00000517417 U2SURPO15042 1029 aaKnown RBP14.05□□□□□ -0.16
PCDHGA1-202ENST00000517417 TMF1P82094 1093 aa14.05□□□□□ -0.16
PCDHGA1-202ENST00000517417 PTPRGP23470 1445 aa14.04□□□□□ -0.16
PCDHGA1-202ENST00000517417 KTN1Q86UP2 1357 aaKnown RBP14.04□□□□□ -0.16
PCDHGA1-202ENST00000517417 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
PCDHGA1-202ENST00000517417 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
PCDHGA1-202ENST00000517417 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
PCDHGA1-202ENST00000517417 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
PCDHGA1-202ENST00000517417 LMOD2Q6P5Q4 547 aa14.03□□□□□ -0.16
PCDHGA1-202ENST00000517417 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
PCDHGA1-202ENST00000517417 EHBP1L1Q8N3D4 1523 aa14.02□□□□□ -0.16
PCDHGA1-202ENST00000517417 MAPK8IP3Q9UPT6 1336 aa14.02□□□□□ -0.17
PCDHGA1-202ENST00000517417 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.17
PCDHGA1-202ENST00000517417 NUP155O75694 1391 aa14.02□□□□□ -0.17
PCDHGA1-202ENST00000517417 PDE4AP27815 886 aa14.02□□□□□ -0.17
PCDHGA1-202ENST00000517417 MYBBP1AQ9BQG0 1328 aaKnown RBP14.02□□□□□ -0.17
PCDHGA1-202ENST00000517417 PBRM1Q86U86 1689 aa14.02□□□□□ -0.17
PCDHGA1-202ENST00000517417 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
PCDHGA1-202ENST00000517417 ZNF644Q9H582 1327 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA1-202ENST00000517417 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
PCDHGA1-202ENST00000517417 WDR62O43379 1518 aa14□□□□□ -0.17
PCDHGA1-202ENST00000517417 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
PCDHGA1-202ENST00000517417 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
PCDHGA1-202ENST00000517417 SOX12O15370 315 aa14□□□□□ -0.17
PCDHGA1-202ENST00000517417 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
PCDHGA1-202ENST00000517417 SMG6Q86US8 1419 aaKnown RBP13.99□□□□□ -0.17
PCDHGA1-202ENST00000517417 SUPT6HQ7KZ85 1726 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms