RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 CAMSAP2Q08AD1 1489 aa22.07■■□□□ 1.12
SDHA-218ENST00000515752 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
SDHA-218ENST00000515752 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
SDHA-218ENST00000515752 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
SDHA-218ENST00000515752 NEUROD1Q13562 356 aa22.04■■□□□ 1.12
SDHA-218ENST00000515752 ABCC2Q92887 1545 aa22.02■■□□□ 1.12
SDHA-218ENST00000515752 ADGRL2O95490 1459 aa21.99■■□□□ 1.11
SDHA-218ENST00000515752 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
SDHA-218ENST00000515752 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
SDHA-218ENST00000515752 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
SDHA-218ENST00000515752 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
SDHA-218ENST00000515752 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
SDHA-218ENST00000515752 NCOA1Q15788 1441 aa21.97■■□□□ 1.11
SDHA-218ENST00000515752 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
SDHA-218ENST00000515752 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
SDHA-218ENST00000515752 ANKRD30AQ9BXX3 1397 aa21.95■■□□□ 1.11
SDHA-218ENST00000515752 RSPH4AQ5TD94 716 aa21.95■■□□□ 1.1
SDHA-218ENST00000515752 MPHOSPH9Q99550 1183 aa21.94■■□□□ 1.1
SDHA-218ENST00000515752 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
SDHA-218ENST00000515752 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
SDHA-218ENST00000515752 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
SDHA-218ENST00000515752 KDM6BO15054 1643 aa21.91■■□□□ 1.1
SDHA-218ENST00000515752 TSPY4P0CV99 314 aa21.9■■□□□ 1.1
SDHA-218ENST00000515752 TSPY10P0CW01 314 aa21.9■■□□□ 1.1
SDHA-218ENST00000515752 ARHGEF5Q12774 1597 aa21.89■■□□□ 1.1
SDHA-218ENST00000515752 KDM5BQ9UGL1 1544 aa21.87■■□□□ 1.09
SDHA-218ENST00000515752 PREX2Q70Z35 1606 aa21.87■■□□□ 1.09
SDHA-218ENST00000515752 DENND4BO75064 1496 aaPredicted RBP21.86■■□□□ 1.09
SDHA-218ENST00000515752 C9orf84Q5VXU9 1444 aa21.85■■□□□ 1.09
SDHA-218ENST00000515752 PLEKHH2Q8IVE3 1493 aa21.84■■□□□ 1.09
SDHA-218ENST00000515752 MBD5Q9P267 1494 aa21.83■■□□□ 1.09
SDHA-218ENST00000515752 ANKRD50Q9ULJ7 1429 aa21.83■■□□□ 1.08
SDHA-218ENST00000515752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.82■■□□□ 1.08
SDHA-218ENST00000515752 CCDC141Q6ZP82 1450 aa21.82■■□□□ 1.08
SDHA-218ENST00000515752 SLC4A1APQ9BWU0 796 aaKnown RBP21.82■■□□□ 1.08
SDHA-218ENST00000515752 KIAA1107Q9UPP5 1409 aa21.8■■□□□ 1.08
SDHA-218ENST00000515752 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
SDHA-218ENST00000515752 MIER1Q8N108 512 aa21.8■■□□□ 1.08
SDHA-218ENST00000515752 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
SDHA-218ENST00000515752 ZCCHC11Q5TAX3 1644 aaKnown RBP21.79■■□□□ 1.08
SDHA-218ENST00000515752 SAMD9LQ8IVG5 1584 aa21.79■■□□□ 1.08
SDHA-218ENST00000515752 ARHGAP5Q13017 1502 aa21.78■■□□□ 1.08
SDHA-218ENST00000515752 CENPBP07199 599 aaPredicted RBP21.78■■□□□ 1.08
SDHA-218ENST00000515752 HNRNPMP52272 730 aaKnown RBP eCLIP21.78■■□□□ 1.08
SDHA-218ENST00000515752 TTC37Q6PGP7 1564 aa21.77■■□□□ 1.08
SDHA-218ENST00000515752 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
SDHA-218ENST00000515752 PLCH2O75038 1416 aa21.75■■□□□ 1.07
SDHA-218ENST00000515752 MYO5CQ9NQX4 1742 aa21.75■■□□□ 1.07
SDHA-218ENST00000515752 PZPP20742 1482 aa21.75■■□□□ 1.07
SDHA-218ENST00000515752 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
SDHA-218ENST00000515752 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
SDHA-218ENST00000515752 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
SDHA-218ENST00000515752 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
SDHA-218ENST00000515752 MAST1Q9Y2H9 1570 aa21.72■■□□□ 1.07
SDHA-218ENST00000515752 ARAP3Q8WWN8 1544 aa21.71■■□□□ 1.07
SDHA-218ENST00000515752 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
SDHA-218ENST00000515752 SYCP2Q9BX26 1530 aa21.69■■□□□ 1.06
SDHA-218ENST00000515752 FOXD1Q16676 465 aa21.67■■□□□ 1.06
SDHA-218ENST00000515752 NUP155O75694 1391 aa21.67■■□□□ 1.06
SDHA-218ENST00000515752 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
SDHA-218ENST00000515752 WDR7Q9Y4E6 1490 aa21.66■■□□□ 1.06
SDHA-218ENST00000515752 PKD2Q13563 968 aa21.64■■□□□ 1.06
SDHA-218ENST00000515752 PLXNC1O60486 1568 aa21.62■■□□□ 1.05
SDHA-218ENST00000515752 TEX14Q8IWB6 1497 aa21.6■■□□□ 1.05
SDHA-218ENST00000515752 ABCC1P33527 1531 aa21.59■■□□□ 1.05
SDHA-218ENST00000515752 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.04
SDHA-218ENST00000515752 DUOX2Q9NRD8 1548 aa21.57■■□□□ 1.04
SDHA-218ENST00000515752 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDHA-218ENST00000515752 ARHGEF12Q9NZN5 1544 aa21.56■■□□□ 1.04
SDHA-218ENST00000515752 RTEL1-TNFRSF6BF6WH68 1400 aa21.55■■□□□ 1.04
SDHA-218ENST00000515752 ERBINQ96RT1 1412 aa21.55■■□□□ 1.04
SDHA-218ENST00000515752 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
SDHA-218ENST00000515752 ABCA9Q8IUA7 1624 aa21.54■■□□□ 1.04
SDHA-218ENST00000515752 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
SDHA-218ENST00000515752 UNC13BO14795 1591 aa21.52■■□□□ 1.04
SDHA-218ENST00000515752 FAM135AQ9P2D6 1515 aa21.52■■□□□ 1.04
SDHA-218ENST00000515752 FANCAO15360 1455 aa21.49■■□□□ 1.03
SDHA-218ENST00000515752 SPAG9O60271 1321 aaKnown RBP21.49■■□□□ 1.03
SDHA-218ENST00000515752 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
SDHA-218ENST00000515752 HIRIP3Q9BW71 556 aaPredicted RBP21.48■■□□□ 1.03
SDHA-218ENST00000515752 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
SDHA-218ENST00000515752 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
SDHA-218ENST00000515752 NBPF8Q3BBV2 869 aa21.45■■□□□ 1.03
SDHA-218ENST00000515752 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.02
SDHA-218ENST00000515752 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
SDHA-218ENST00000515752 UHRF1BP1Q6BDS2 1440 aa21.43■■□□□ 1.02
SDHA-218ENST00000515752 ANP32CO43423 234 aa21.42■■□□□ 1.02
SDHA-218ENST00000515752 ADGRL1O94910 1474 aa21.4■■□□□ 1.02
SDHA-218ENST00000515752 ZFYVE16Q7Z3T8 1539 aa21.4■■□□□ 1.02
SDHA-218ENST00000515752 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
SDHA-218ENST00000515752 CCDC144AA2RUR9 1427 aa21.4■■□□□ 1.02
SDHA-218ENST00000515752 CCER2I3L3R5 266 aa21.39■■□□□ 1.02
SDHA-218ENST00000515752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.39■■□□□ 1.01
SDHA-218ENST00000515752 ATP10AO60312 1499 aa21.38■■□□□ 1.01
SDHA-218ENST00000515752 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
SDHA-218ENST00000515752 SCAPERQ9BY12 1400 aa21.38■■□□□ 1.01
SDHA-218ENST00000515752 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
SDHA-218ENST00000515752 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
SDHA-218ENST00000515752 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
SDHA-218ENST00000515752 CFAP74Q9C0B2 1584 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms