RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
CSNK1A1-206ENST00000515748 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
CSNK1A1-206ENST00000515748 ZFYVE16Q7Z3T8 1539 aa15.64■□□□□ 0.09
CSNK1A1-206ENST00000515748 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
CSNK1A1-206ENST00000515748 ZNF335Q9H4Z2 1342 aaPredicted RBP15.64■□□□□ 0.09
CSNK1A1-206ENST00000515748 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
CSNK1A1-206ENST00000515748 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
CSNK1A1-206ENST00000515748 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
CSNK1A1-206ENST00000515748 EFCAB5A4FU69 1503 aa15.62■□□□□ 0.09
CSNK1A1-206ENST00000515748 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
CSNK1A1-206ENST00000515748 PIP4K2BP78356 416 aa15.61■□□□□ 0.09
CSNK1A1-206ENST00000515748 ATP10AO60312 1499 aa15.59■□□□□ 0.09
CSNK1A1-206ENST00000515748 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
CSNK1A1-206ENST00000515748 NCOA1Q15788 1441 aa15.59■□□□□ 0.09
CSNK1A1-206ENST00000515748 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.08
CSNK1A1-206ENST00000515748 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.08
CSNK1A1-206ENST00000515748 PLEKHD1A6NEE1 506 aa15.56■□□□□ 0.08
CSNK1A1-206ENST00000515748 TOM1O60784 492 aa15.55■□□□□ 0.08
CSNK1A1-206ENST00000515748 HECW1Q76N89 1606 aa15.54■□□□□ 0.08
CSNK1A1-206ENST00000515748 TRAPPC8Q9Y2L5 1435 aa15.54■□□□□ 0.08
CSNK1A1-206ENST00000515748 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
CSNK1A1-206ENST00000515748 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
CSNK1A1-206ENST00000515748 ESF1Q9H501 851 aaKnown RBP15.52■□□□□ 0.08
CSNK1A1-206ENST00000515748 RGS17Q9UGC6 210 aaPredicted RBP15.5■□□□□ 0.07
CSNK1A1-206ENST00000515748 PKD2Q13563 968 aa15.48■□□□□ 0.07
CSNK1A1-206ENST00000515748 CAMSAP1Q5T5Y3 1602 aa15.46■□□□□ 0.07
CSNK1A1-206ENST00000515748 CFAP74Q9C0B2 1584 aa15.46■□□□□ 0.07
CSNK1A1-206ENST00000515748 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
CSNK1A1-206ENST00000515748 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
CSNK1A1-206ENST00000515748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.43■□□□□ 0.061e-7■□□□□ 9.5
CSNK1A1-206ENST00000515748 AFAP1Q8N556 730 aa15.43■□□□□ 0.06
CSNK1A1-206ENST00000515748 C3P01024 1663 aa15.42■□□□□ 0.06
CSNK1A1-206ENST00000515748 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
CSNK1A1-206ENST00000515748 NUP153P49790 1475 aaKnown RBP15.41■□□□□ 0.06
CSNK1A1-206ENST00000515748 EFCAB2Q5VUJ9 269 aa15.41■□□□□ 0.06
CSNK1A1-206ENST00000515748 RAPGEF6Q8TEU7 1601 aa15.4■□□□□ 0.06
CSNK1A1-206ENST00000515748 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
CSNK1A1-206ENST00000515748 PLCH2O75038 1416 aa15.4■□□□□ 0.06
CSNK1A1-206ENST00000515748 POTEAQ6S8J7 498 aa15.36■□□□□ 0.05
CSNK1A1-206ENST00000515748 NPATQ14207 1427 aa15.35■□□□□ 0.05
CSNK1A1-206ENST00000515748 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
CSNK1A1-206ENST00000515748 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
CSNK1A1-206ENST00000515748 PLA2R1Q13018 1463 aa15.33■□□□□ 0.05
CSNK1A1-206ENST00000515748 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
CSNK1A1-206ENST00000515748 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
CSNK1A1-206ENST00000515748 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
CSNK1A1-206ENST00000515748 ZNF518AQ6AHZ1 1483 aa15.31■□□□□ 0.04
CSNK1A1-206ENST00000515748 AGLP35573 1532 aa15.31■□□□□ 0.04
CSNK1A1-206ENST00000515748 CPS1P31327 1500 aa15.29■□□□□ 0.04
CSNK1A1-206ENST00000515748 SHANK2Q9UPX8 1470 aa15.29■□□□□ 0.04
CSNK1A1-206ENST00000515748 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
CSNK1A1-206ENST00000515748 REREQ9P2R6 1566 aa15.27■□□□□ 0.03
CSNK1A1-206ENST00000515748 DIP2CQ9Y2E4 1556 aa15.27■□□□□ 0.03
CSNK1A1-206ENST00000515748 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
CSNK1A1-206ENST00000515748 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
CSNK1A1-206ENST00000515748 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
CSNK1A1-206ENST00000515748 KDM5CP41229 1560 aa15.24■□□□□ 0.03
CSNK1A1-206ENST00000515748 UPF1Q92900 1129 aaKnown RBP eCLIP15.22■□□□□ 0.03
CSNK1A1-206ENST00000515748 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
CSNK1A1-206ENST00000515748 CEP170BQ9Y4F5 1589 aaPredicted RBP15.19■□□□□ 0.02
CSNK1A1-206ENST00000515748 ABCA6Q8N139 1617 aa15.18■□□□□ 0.02
CSNK1A1-206ENST00000515748 ANKLE2Q86XL3 938 aa15.18■□□□□ 0.02
CSNK1A1-206ENST00000515748 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
CSNK1A1-206ENST00000515748 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
CSNK1A1-206ENST00000515748 ZNF142P52746 1687 aaPredicted RBP15.16■□□□□ 0.02
CSNK1A1-206ENST00000515748 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
CSNK1A1-206ENST00000515748 CDK11AQ9UQ88 783 aaPredicted RBP15.15■□□□□ 0.02
CSNK1A1-206ENST00000515748 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
CSNK1A1-206ENST00000515748 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
CSNK1A1-206ENST00000515748 ARHGAP5Q13017 1502 aa15.14■□□□□ 0.01
CSNK1A1-206ENST00000515748 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
CSNK1A1-206ENST00000515748 ATP1B4Q9UN42 357 aaPredicted RBP15.14■□□□□ 0.01
CSNK1A1-206ENST00000515748 A2ML1A8K2U0 1454 aa15.14■□□□□ 0.01
CSNK1A1-206ENST00000515748 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
CSNK1A1-206ENST00000515748 GGT6Q6P531 493 aa15.13■□□□□ 0.01
CSNK1A1-206ENST00000515748 VWDEQ8N2E2 1590 aa15.12■□□□□ 0.01
CSNK1A1-206ENST00000515748 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
CSNK1A1-206ENST00000515748 CLIP1P30622 1438 aa15.11■□□□□ 0.01
CSNK1A1-206ENST00000515748 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
CSNK1A1-206ENST00000515748 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
CSNK1A1-206ENST00000515748 THEMISQ8N1K5 641 aaPredicted RBP15.09■□□□□ 0.01
CSNK1A1-206ENST00000515748 NEURL4Q96JN8 1562 aa15.09■□□□□ 0.01
CSNK1A1-206ENST00000515748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
CSNK1A1-206ENST00000515748 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
CSNK1A1-206ENST00000515748 CEP162Q5TB80 1403 aa15.08■□□□□ 0
CSNK1A1-206ENST00000515748 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
CSNK1A1-206ENST00000515748 NPHP4O75161 1426 aaPredicted RBP15.07■□□□□ 0
CSNK1A1-206ENST00000515748 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
CSNK1A1-206ENST00000515748 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
CSNK1A1-206ENST00000515748 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
CSNK1A1-206ENST00000515748 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
CSNK1A1-206ENST00000515748 TRIM52Q96A61 297 aa15.04■□□□□ -0
CSNK1A1-206ENST00000515748 MED14O60244 1454 aa15.03■□□□□ -0
CSNK1A1-206ENST00000515748 KIF14Q15058 1648 aa15.03■□□□□ -0
CSNK1A1-206ENST00000515748 CASKIN1Q8WXD9 1431 aa15.02■□□□□ -0
CSNK1A1-206ENST00000515748 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
CSNK1A1-206ENST00000515748 POLR1AO95602 1720 aaPredicted RBP15.02□□□□□ -0.01
CSNK1A1-206ENST00000515748 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
CSNK1A1-206ENST00000515748 TNRQ92752 1358 aa15.01□□□□□ -0.01
CSNK1A1-206ENST00000515748 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms