RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
SH3TC1-225ENST00000515682 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
SH3TC1-225ENST00000515682 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
SH3TC1-225ENST00000515682 TOP2BQ02880 1626 aa17.96■□□□□ 0.46
SH3TC1-225ENST00000515682 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
SH3TC1-225ENST00000515682 MRC2Q9UBG0 1479 aa17.94■□□□□ 0.46
SH3TC1-225ENST00000515682 MAPKBP1O60336 1514 aa17.94■□□□□ 0.46
SH3TC1-225ENST00000515682 RGL3Q3MIN7 710 aa17.94■□□□□ 0.46
SH3TC1-225ENST00000515682 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
SH3TC1-225ENST00000515682 RGS3P49796 1198 aa17.92■□□□□ 0.46
SH3TC1-225ENST00000515682 RCAN3Q9UKA8 241 aa17.91■□□□□ 0.46
SH3TC1-225ENST00000515682 EXOC6Q8TAG9 804 aa17.9■□□□□ 0.46
SH3TC1-225ENST00000515682 AKNAQ7Z591 1439 aa17.9■□□□□ 0.46
SH3TC1-225ENST00000515682 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
SH3TC1-225ENST00000515682 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.45
SH3TC1-225ENST00000515682 PRKCSHP14314 528 aaPredicted RBP17.89■□□□□ 0.45
SH3TC1-225ENST00000515682 SLC4A3P48751 1232 aa17.88■□□□□ 0.45
SH3TC1-225ENST00000515682 PTPRGP23470 1445 aa17.88■□□□□ 0.45
SH3TC1-225ENST00000515682 CCDC7Q96M83 1385 aa17.88■□□□□ 0.45
SH3TC1-225ENST00000515682 PDE4AP27815 886 aa17.87■□□□□ 0.45
SH3TC1-225ENST00000515682 UACAQ9BZF9 1416 aa17.87■□□□□ 0.45
SH3TC1-225ENST00000515682 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
SH3TC1-225ENST00000515682 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
SH3TC1-225ENST00000515682 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
SH3TC1-225ENST00000515682 FGD6Q6ZV73 1430 aa17.86■□□□□ 0.45
SH3TC1-225ENST00000515682 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
SH3TC1-225ENST00000515682 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
SH3TC1-225ENST00000515682 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
SH3TC1-225ENST00000515682 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
SH3TC1-225ENST00000515682 TIAM1Q13009 1591 aa17.84■□□□□ 0.45
SH3TC1-225ENST00000515682 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
SH3TC1-225ENST00000515682 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
SH3TC1-225ENST00000515682 PLIN1O60240 522 aa17.83■□□□□ 0.45
SH3TC1-225ENST00000515682 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.44
SH3TC1-225ENST00000515682 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
SH3TC1-225ENST00000515682 HNRNPMP52272 730 aaKnown RBP eCLIP17.81■□□□□ 0.445e-8■■■■□ 19.4
SH3TC1-225ENST00000515682 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.81■□□□□ 0.44
SH3TC1-225ENST00000515682 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
SH3TC1-225ENST00000515682 RRP1P56182 461 aaKnown RBP17.79■□□□□ 0.44
SH3TC1-225ENST00000515682 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
SH3TC1-225ENST00000515682 PKD2Q13563 968 aa17.78■□□□□ 0.44
SH3TC1-225ENST00000515682 DCAF11Q8TEB1 546 aa17.78■□□□□ 0.44
SH3TC1-225ENST00000515682 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
SH3TC1-225ENST00000515682 NBPF8Q3BBV2 869 aa17.76■□□□□ 0.43
SH3TC1-225ENST00000515682 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
SH3TC1-225ENST00000515682 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
SH3TC1-225ENST00000515682 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
SH3TC1-225ENST00000515682 BRPF3Q9ULD4 1205 aa17.73■□□□□ 0.43
SH3TC1-225ENST00000515682 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
SH3TC1-225ENST00000515682 GSE1Q14687 1217 aa17.72■□□□□ 0.43
SH3TC1-225ENST00000515682 GGT6Q6P531 493 aa17.72■□□□□ 0.43
SH3TC1-225ENST00000515682 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
SH3TC1-225ENST00000515682 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
SH3TC1-225ENST00000515682 USP47Q96K76 1375 aa17.7■□□□□ 0.42
SH3TC1-225ENST00000515682 MLECQ14165 292 aa17.69■□□□□ 0.42
SH3TC1-225ENST00000515682 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
SH3TC1-225ENST00000515682 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
SH3TC1-225ENST00000515682 ANKRD30AQ9BXX3 1397 aa17.69■□□□□ 0.42
SH3TC1-225ENST00000515682 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
SH3TC1-225ENST00000515682 SKAP1Q86WV1 359 aa17.68■□□□□ 0.42
SH3TC1-225ENST00000515682 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
SH3TC1-225ENST00000515682 BECN1Q14457 450 aa17.67■□□□□ 0.42
SH3TC1-225ENST00000515682 NUP155O75694 1391 aa17.67■□□□□ 0.42
SH3TC1-225ENST00000515682 RALBP1Q15311 655 aa17.67■□□□□ 0.42
SH3TC1-225ENST00000515682 NAIPQ13075 1403 aa17.66■□□□□ 0.42
SH3TC1-225ENST00000515682 GLIPR1L2Q4G1C9 344 aa17.66■□□□□ 0.42
SH3TC1-225ENST00000515682 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
SH3TC1-225ENST00000515682 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
SH3TC1-225ENST00000515682 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
SH3TC1-225ENST00000515682 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
SH3TC1-225ENST00000515682 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
SH3TC1-225ENST00000515682 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
SH3TC1-225ENST00000515682 ZNF644Q9H582 1327 aaPredicted RBP17.65■□□□□ 0.42
SH3TC1-225ENST00000515682 NFKBIBQ15653 356 aa17.64■□□□□ 0.42
SH3TC1-225ENST00000515682 SPRYD3Q8NCJ5 442 aa17.64■□□□□ 0.42
SH3TC1-225ENST00000515682 MYBBP1AQ9BQG0 1328 aaKnown RBP17.64■□□□□ 0.42
SH3TC1-225ENST00000515682 NAP1L5Q96NT1 182 aaPredicted RBP17.64■□□□□ 0.41
SH3TC1-225ENST00000515682 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
SH3TC1-225ENST00000515682 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.41
SH3TC1-225ENST00000515682 SPAG9O60271 1321 aaKnown RBP17.64■□□□□ 0.41
SH3TC1-225ENST00000515682 KNSTRNQ9Y448 316 aa17.63■□□□□ 0.41
SH3TC1-225ENST00000515682 KIF3BO15066 747 aa17.63■□□□□ 0.41
SH3TC1-225ENST00000515682 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
SH3TC1-225ENST00000515682 KIF15Q9NS87 1388 aa17.62■□□□□ 0.41
SH3TC1-225ENST00000515682 MS4A1P11836 297 aa17.62■□□□□ 0.41
SH3TC1-225ENST00000515682 PNISRQ8TF01 805 aaKnown RBP17.62■□□□□ 0.41
SH3TC1-225ENST00000515682 KANK1Q14678 1352 aa17.62■□□□□ 0.41
SH3TC1-225ENST00000515682 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
SH3TC1-225ENST00000515682 PCF11O94913 1555 aaKnown RBP17.61■□□□□ 0.41
SH3TC1-225ENST00000515682 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
SH3TC1-225ENST00000515682 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
SH3TC1-225ENST00000515682 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
SH3TC1-225ENST00000515682 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
SH3TC1-225ENST00000515682 PDE3BQ13370 1112 aa17.59■□□□□ 0.41
SH3TC1-225ENST00000515682 ROCK2O75116 1388 aaKnown RBP17.58■□□□□ 0.41
SH3TC1-225ENST00000515682 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.41
SH3TC1-225ENST00000515682 PTPRKQ15262 1439 aa17.57■□□□□ 0.4
SH3TC1-225ENST00000515682 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
SH3TC1-225ENST00000515682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.55■□□□□ 0.48e-7■■■■□ 22.9
SH3TC1-225ENST00000515682 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms