RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 CDC42BPAQ5VT25 1732 aa22.61■■□□□ 1.21
THUMPD3-210ENST00000515662 ROCK1Q13464 1354 aa22.59■■□□□ 1.21
THUMPD3-210ENST00000515662 UHRF1BP1LA0JNW5 1464 aa22.58■■□□□ 1.2
THUMPD3-210ENST00000515662 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
THUMPD3-210ENST00000515662 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
THUMPD3-210ENST00000515662 KDM6BO15054 1643 aa22.54■■□□□ 1.2
THUMPD3-210ENST00000515662 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
THUMPD3-210ENST00000515662 KDM5BQ9UGL1 1544 aa22.5■■□□□ 1.19
THUMPD3-210ENST00000515662 CROCC2H7BZ55 1655 aa22.5■■□□□ 1.19
THUMPD3-210ENST00000515662 SIN3AQ96ST3 1273 aa22.49■■□□□ 1.19
THUMPD3-210ENST00000515662 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
THUMPD3-210ENST00000515662 ADGBQ8N7X0 1667 aa22.48■■□□□ 1.19
THUMPD3-210ENST00000515662 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
THUMPD3-210ENST00000515662 ADGRL2O95490 1459 aa22.46■■□□□ 1.19
THUMPD3-210ENST00000515662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.46■■□□□ 1.19
THUMPD3-210ENST00000515662 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
THUMPD3-210ENST00000515662 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.19
THUMPD3-210ENST00000515662 NEUROD1Q13562 356 aa22.45■■□□□ 1.18
THUMPD3-210ENST00000515662 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
THUMPD3-210ENST00000515662 TIMELESSQ9UNS1 1208 aa22.43■■□□□ 1.18
THUMPD3-210ENST00000515662 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
THUMPD3-210ENST00000515662 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
THUMPD3-210ENST00000515662 TRIM52Q96A61 297 aa22.42■■□□□ 1.18
THUMPD3-210ENST00000515662 SHANK2Q9UPX8 1470 aa22.42■■□□□ 1.18
THUMPD3-210ENST00000515662 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
THUMPD3-210ENST00000515662 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
THUMPD3-210ENST00000515662 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
THUMPD3-210ENST00000515662 ANKRD30AQ9BXX3 1397 aa22.4■■□□□ 1.18
THUMPD3-210ENST00000515662 MBD5Q9P267 1494 aa22.4■■□□□ 1.18
THUMPD3-210ENST00000515662 MYO5CQ9NQX4 1742 aa22.38■■□□□ 1.17
THUMPD3-210ENST00000515662 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
THUMPD3-210ENST00000515662 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
THUMPD3-210ENST00000515662 ARHGAP5Q13017 1502 aa22.37■■□□□ 1.17
THUMPD3-210ENST00000515662 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.17
THUMPD3-210ENST00000515662 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
THUMPD3-210ENST00000515662 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
THUMPD3-210ENST00000515662 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
THUMPD3-210ENST00000515662 CCDC141Q6ZP82 1450 aa22.33■■□□□ 1.17
THUMPD3-210ENST00000515662 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
THUMPD3-210ENST00000515662 PLCH2O75038 1416 aa22.31■■□□□ 1.16
THUMPD3-210ENST00000515662 SYCP2Q9BX26 1530 aa22.3■■□□□ 1.16
THUMPD3-210ENST00000515662 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
THUMPD3-210ENST00000515662 ANKRD50Q9ULJ7 1429 aa22.29■■□□□ 1.16
THUMPD3-210ENST00000515662 PLEKHH2Q8IVE3 1493 aa22.29■■□□□ 1.16
THUMPD3-210ENST00000515662 WDR7Q9Y4E6 1490 aa22.29■■□□□ 1.16
THUMPD3-210ENST00000515662 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
THUMPD3-210ENST00000515662 PPP1R15AO75807 674 aaPredicted RBP22.28■■□□□ 1.16
THUMPD3-210ENST00000515662 PZPP20742 1482 aa22.26■■□□□ 1.15
THUMPD3-210ENST00000515662 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
THUMPD3-210ENST00000515662 MAST1Q9Y2H9 1570 aa22.25■■□□□ 1.15
THUMPD3-210ENST00000515662 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
THUMPD3-210ENST00000515662 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
THUMPD3-210ENST00000515662 ARAP3Q8WWN8 1544 aa22.23■■□□□ 1.15
THUMPD3-210ENST00000515662 FOXD1Q16676 465 aa22.23■■□□□ 1.15
THUMPD3-210ENST00000515662 ARHGEF12Q9NZN5 1544 aa22.22■■□□□ 1.15
THUMPD3-210ENST00000515662 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
THUMPD3-210ENST00000515662 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
THUMPD3-210ENST00000515662 ABCC1P33527 1531 aa22.19■■□□□ 1.14
THUMPD3-210ENST00000515662 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
THUMPD3-210ENST00000515662 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
THUMPD3-210ENST00000515662 KDM5DQ9BY66 1539 aa22.16■■□□□ 1.14
THUMPD3-210ENST00000515662 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
THUMPD3-210ENST00000515662 RPRD2Q5VT52 1461 aaKnown RBP22.14■■□□□ 1.14
THUMPD3-210ENST00000515662 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
THUMPD3-210ENST00000515662 NUP155O75694 1391 aa22.13■■□□□ 1.13
THUMPD3-210ENST00000515662 TRAPPC8Q9Y2L5 1435 aa22.11■■□□□ 1.13
THUMPD3-210ENST00000515662 PKD2Q13563 968 aa22.1■■□□□ 1.13
THUMPD3-210ENST00000515662 FANCAO15360 1455 aa22.09■■□□□ 1.13
THUMPD3-210ENST00000515662 DUOX2Q9NRD8 1548 aa22.07■■□□□ 1.12
THUMPD3-210ENST00000515662 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
THUMPD3-210ENST00000515662 MIER1Q8N108 512 aa22.05■■□□□ 1.12
THUMPD3-210ENST00000515662 UNC13BO14795 1591 aa22.05■■□□□ 1.12
THUMPD3-210ENST00000515662 TEX14Q8IWB6 1497 aa22.05■■□□□ 1.12
THUMPD3-210ENST00000515662 RTEL1-TNFRSF6BF6WH68 1400 aa22.03■■□□□ 1.12
THUMPD3-210ENST00000515662 FAM135AQ9P2D6 1515 aa22.02■■□□□ 1.12
THUMPD3-210ENST00000515662 ERBINQ96RT1 1412 aa22.02■■□□□ 1.12
THUMPD3-210ENST00000515662 SPAG9O60271 1321 aaKnown RBP22.02■■□□□ 1.12
THUMPD3-210ENST00000515662 AFAP1Q8N556 730 aa22.02■■□□□ 1.11
THUMPD3-210ENST00000515662 ZFYVE16Q7Z3T8 1539 aa22.01■■□□□ 1.11
THUMPD3-210ENST00000515662 ADGRL1O94910 1474 aa22■■□□□ 1.11
THUMPD3-210ENST00000515662 SCAPERQ9BY12 1400 aa21.98■■□□□ 1.11
THUMPD3-210ENST00000515662 MAGI2Q86UL8 1455 aa21.97■■□□□ 1.11
THUMPD3-210ENST00000515662 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
THUMPD3-210ENST00000515662 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
THUMPD3-210ENST00000515662 CD109Q6YHK3 1445 aa21.96■■□□□ 1.11
THUMPD3-210ENST00000515662 HIRIP3Q9BW71 556 aaPredicted RBP21.95■■□□□ 1.1
THUMPD3-210ENST00000515662 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
THUMPD3-210ENST00000515662 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
THUMPD3-210ENST00000515662 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
THUMPD3-210ENST00000515662 ATP7AQ04656 1500 aa21.94■■□□□ 1.1
THUMPD3-210ENST00000515662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.12e-6■■□□□ 13.3
THUMPD3-210ENST00000515662 CFAP74Q9C0B2 1584 aa21.92■■□□□ 1.1
THUMPD3-210ENST00000515662 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
THUMPD3-210ENST00000515662 CYB5RLQ6IPT4 315 aa21.91■■□□□ 1.1
THUMPD3-210ENST00000515662 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
THUMPD3-210ENST00000515662 DDX10Q13206 875 aaKnown RBP21.85■■□□□ 1.09
THUMPD3-210ENST00000515662 PLA2R1Q13018 1463 aa21.85■■□□□ 1.09
THUMPD3-210ENST00000515662 HSPA5P11021 654 aaKnown RBP21.84■■□□□ 1.09
THUMPD3-210ENST00000515662 DEPDC5O75140 1603 aa21.84■■□□□ 1.09
THUMPD3-210ENST00000515662 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms