RNA–Protein interactions for RNA: ENST00000515031.5

LINC00504-204, long intergenic non-protein coding RNA 504, humanhuman

TSL 3

Gene LINC00504, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-204ENST00000515031 CUX1P39880 1505 aa12.22□□□□□ -0.45
LINC00504-204ENST00000515031 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
LINC00504-204ENST00000515031 LHX8Q68G74 356 aa12.22□□□□□ -0.45
LINC00504-204ENST00000515031 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
LINC00504-204ENST00000515031 ARAP1Q96P48 1450 aa12.21□□□□□ -0.45
LINC00504-204ENST00000515031 TIE1P35590 1138 aa12.21□□□□□ -0.45
LINC00504-204ENST00000515031 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
LINC00504-204ENST00000515031 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
LINC00504-204ENST00000515031 PSEN1P49768 467 aa12.18□□□□□ -0.46
LINC00504-204ENST00000515031 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
LINC00504-204ENST00000515031 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
LINC00504-204ENST00000515031 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
LINC00504-204ENST00000515031 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
LINC00504-204ENST00000515031 ARHGAP35Q9NRY4 1499 aa12.1□□□□□ -0.47
LINC00504-204ENST00000515031 MYT1Q01538 1121 aa12.1□□□□□ -0.47
LINC00504-204ENST00000515031 NEUROD1Q13562 356 aa12.1□□□□□ -0.47
LINC00504-204ENST00000515031 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
LINC00504-204ENST00000515031 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
LINC00504-204ENST00000515031 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
LINC00504-204ENST00000515031 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
LINC00504-204ENST00000515031 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
LINC00504-204ENST00000515031 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
LINC00504-204ENST00000515031 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
LINC00504-204ENST00000515031 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 CADPSQ9ULU8 1353 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
LINC00504-204ENST00000515031 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
LINC00504-204ENST00000515031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00504-204ENST00000515031 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
LINC00504-204ENST00000515031 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
LINC00504-204ENST00000515031 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00504-204ENST00000515031 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
LINC00504-204ENST00000515031 C7P10643 843 aa12.04□□□□□ -0.48
LINC00504-204ENST00000515031 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
LINC00504-204ENST00000515031 CUL7Q14999 1698 aa12.03□□□□□ -0.48
LINC00504-204ENST00000515031 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
LINC00504-204ENST00000515031 IGF1RP08069 1367 aa12.03□□□□□ -0.48
LINC00504-204ENST00000515031 STK25O00506 426 aa12.02□□□□□ -0.49
LINC00504-204ENST00000515031 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
LINC00504-204ENST00000515031 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
LINC00504-204ENST00000515031 SEC24BO95487 1268 aa12□□□□□ -0.49
LINC00504-204ENST00000515031 GOLGA2Q08379 1002 aa12□□□□□ -0.49
LINC00504-204ENST00000515031 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
LINC00504-204ENST00000515031 FYCO1Q9BQS8 1478 aa12□□□□□ -0.49
LINC00504-204ENST00000515031 EFCAB3Q8N7B9 438 aa11.99□□□□□ -0.49
LINC00504-204ENST00000515031 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
LINC00504-204ENST00000515031 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
LINC00504-204ENST00000515031 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
LINC00504-204ENST00000515031 ABCA10Q8WWZ4 1543 aa11.99□□□□□ -0.49
LINC00504-204ENST00000515031 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
LINC00504-204ENST00000515031 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
LINC00504-204ENST00000515031 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
LINC00504-204ENST00000515031 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
LINC00504-204ENST00000515031 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
LINC00504-204ENST00000515031 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
LINC00504-204ENST00000515031 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
LINC00504-204ENST00000515031 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
LINC00504-204ENST00000515031 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
LINC00504-204ENST00000515031 IER5LQ5T953 404 aa11.95□□□□□ -0.5
LINC00504-204ENST00000515031 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
LINC00504-204ENST00000515031 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
LINC00504-204ENST00000515031 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
LINC00504-204ENST00000515031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00504-204ENST00000515031 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
LINC00504-204ENST00000515031 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
LINC00504-204ENST00000515031 FANCD2Q9BXW9 1451 aa11.92□□□□□ -0.5
LINC00504-204ENST00000515031 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
LINC00504-204ENST00000515031 SETD5Q9C0A6 1442 aa11.92□□□□□ -0.5
LINC00504-204ENST00000515031 PLCG2P16885 1265 aa11.91□□□□□ -0.5
LINC00504-204ENST00000515031 DPY19L2Q6NUT2 758 aa11.91□□□□□ -0.5
LINC00504-204ENST00000515031 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
LINC00504-204ENST00000515031 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
LINC00504-204ENST00000515031 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
LINC00504-204ENST00000515031 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
LINC00504-204ENST00000515031 FMN1Q68DA7 1419 aa11.9□□□□□ -0.5
LINC00504-204ENST00000515031 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
LINC00504-204ENST00000515031 TOPBP1Q92547 1522 aa11.88□□□□□ -0.51
LINC00504-204ENST00000515031 PDCD7Q8N8D1 485 aaKnown RBP11.88□□□□□ -0.51
LINC00504-204ENST00000515031 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
LINC00504-204ENST00000515031 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
LINC00504-204ENST00000515031 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
LINC00504-204ENST00000515031 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
LINC00504-204ENST00000515031 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
LINC00504-204ENST00000515031 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
LINC00504-204ENST00000515031 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
LINC00504-204ENST00000515031 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
LINC00504-204ENST00000515031 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
LINC00504-204ENST00000515031 PHLDB1Q86UU1 1377 aa11.82□□□□□ -0.52
LINC00504-204ENST00000515031 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
LINC00504-204ENST00000515031 AKNAQ7Z591 1439 aa11.81□□□□□ -0.52
LINC00504-204ENST00000515031 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
LINC00504-204ENST00000515031 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
LINC00504-204ENST00000515031 MFRPQ9BY79 579 aa11.8□□□□□ -0.52
LINC00504-204ENST00000515031 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms