RNA–Protein interactions for RNA: ENST00000515031.5

LINC00504-204, long intergenic non-protein coding RNA 504, humanhuman

TSL 3

Gene LINC00504, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-204ENST00000515031 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
LINC00504-204ENST00000515031 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
LINC00504-204ENST00000515031 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
LINC00504-204ENST00000515031 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
LINC00504-204ENST00000515031 FOXD1Q16676 465 aa19.73■□□□□ 0.75
LINC00504-204ENST00000515031 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
LINC00504-204ENST00000515031 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
LINC00504-204ENST00000515031 ADRA2BP18089 450 aa18.88■□□□□ 0.61
LINC00504-204ENST00000515031 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
LINC00504-204ENST00000515031 MSH5O43196 834 aa18.12■□□□□ 0.49
LINC00504-204ENST00000515031 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
LINC00504-204ENST00000515031 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
LINC00504-204ENST00000515031 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
LINC00504-204ENST00000515031 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
LINC00504-204ENST00000515031 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
LINC00504-204ENST00000515031 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
LINC00504-204ENST00000515031 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
LINC00504-204ENST00000515031 KCNA4P22459 653 aa16.65■□□□□ 0.26
LINC00504-204ENST00000515031 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
LINC00504-204ENST00000515031 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
LINC00504-204ENST00000515031 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
LINC00504-204ENST00000515031 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
LINC00504-204ENST00000515031 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
LINC00504-204ENST00000515031 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
LINC00504-204ENST00000515031 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
LINC00504-204ENST00000515031 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
LINC00504-204ENST00000515031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC00504-204ENST00000515031 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
LINC00504-204ENST00000515031 CACNB1Q02641 598 aaPredicted RBP15.59■□□□□ 0.09
LINC00504-204ENST00000515031 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
LINC00504-204ENST00000515031 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
LINC00504-204ENST00000515031 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
LINC00504-204ENST00000515031 ZBTB22O15209 634 aa15.35■□□□□ 0.05
LINC00504-204ENST00000515031 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
LINC00504-204ENST00000515031 FOXD4L1Q9NU39 408 aa15.27■□□□□ 0.04
LINC00504-204ENST00000515031 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
LINC00504-204ENST00000515031 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
LINC00504-204ENST00000515031 CAPN15O75808 1086 aa15.03■□□□□ -0
LINC00504-204ENST00000515031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
LINC00504-204ENST00000515031 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
LINC00504-204ENST00000515031 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
LINC00504-204ENST00000515031 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
LINC00504-204ENST00000515031 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
LINC00504-204ENST00000515031 APLP2Q06481 763 aa14.84□□□□□ -0.03
LINC00504-204ENST00000515031 DSG3P32926 999 aa14.79□□□□□ -0.04
LINC00504-204ENST00000515031 ABCB7O75027 752 aa14.78□□□□□ -0.04
LINC00504-204ENST00000515031 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
LINC00504-204ENST00000515031 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
LINC00504-204ENST00000515031 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
LINC00504-204ENST00000515031 POLA2Q14181 598 aa14.63□□□□□ -0.07
LINC00504-204ENST00000515031 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
LINC00504-204ENST00000515031 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
LINC00504-204ENST00000515031 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
LINC00504-204ENST00000515031 ZBTB12Q9Y330 459 aaPredicted RBP14.17□□□□□ -0.14
LINC00504-204ENST00000515031 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
LINC00504-204ENST00000515031 FBLN2P98095 1184 aa14.12□□□□□ -0.15
LINC00504-204ENST00000515031 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
LINC00504-204ENST00000515031 POTEHQ6S545 545 aa13.97□□□□□ -0.17
LINC00504-204ENST00000515031 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
LINC00504-204ENST00000515031 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
LINC00504-204ENST00000515031 FKBP8Q14318 412 aa13.9□□□□□ -0.18
LINC00504-204ENST00000515031 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
LINC00504-204ENST00000515031 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
LINC00504-204ENST00000515031 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
LINC00504-204ENST00000515031 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
LINC00504-204ENST00000515031 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
LINC00504-204ENST00000515031 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
LINC00504-204ENST00000515031 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
LINC00504-204ENST00000515031 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
LINC00504-204ENST00000515031 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
LINC00504-204ENST00000515031 ABCC9O60706 1549 aa13.7□□□□□ -0.22
LINC00504-204ENST00000515031 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00504-204ENST00000515031 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
LINC00504-204ENST00000515031 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
LINC00504-204ENST00000515031 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
LINC00504-204ENST00000515031 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
LINC00504-204ENST00000515031 NACADO15069 1562 aa13.49□□□□□ -0.25
LINC00504-204ENST00000515031 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
LINC00504-204ENST00000515031 HRCP23327 699 aa13.45□□□□□ -0.26
LINC00504-204ENST00000515031 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
LINC00504-204ENST00000515031 PROM2Q8N271 834 aa13.41□□□□□ -0.26
LINC00504-204ENST00000515031 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
LINC00504-204ENST00000515031 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
LINC00504-204ENST00000515031 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
LINC00504-204ENST00000515031 SCRIBQ14160 1630 aa13.35□□□□□ -0.27
LINC00504-204ENST00000515031 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC00504-204ENST00000515031 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
LINC00504-204ENST00000515031 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
LINC00504-204ENST00000515031 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
LINC00504-204ENST00000515031 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
LINC00504-204ENST00000515031 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
LINC00504-204ENST00000515031 TRIM26Q12899 539 aaPredicted RBP13.17□□□□□ -0.3
LINC00504-204ENST00000515031 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
LINC00504-204ENST00000515031 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.3
LINC00504-204ENST00000515031 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
LINC00504-204ENST00000515031 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
LINC00504-204ENST00000515031 MIER1Q8N108 512 aa13.1□□□□□ -0.31
LINC00504-204ENST00000515031 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
LINC00504-204ENST00000515031 MROH2BQ7Z745 1585 aa13.09□□□□□ -0.31
LINC00504-204ENST00000515031 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms