RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 RAPGEF6Q8TEU7 1601 aa14.42□□□□□ -0.1
TRIM6-211ENST00000515022 DENND4BO75064 1496 aaPredicted RBP14.42□□□□□ -0.1
TRIM6-211ENST00000515022 PRXQ9BXM0 1461 aa14.42□□□□□ -0.1
TRIM6-211ENST00000515022 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
TRIM6-211ENST00000515022 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
TRIM6-211ENST00000515022 AKNAQ7Z591 1439 aa14.4□□□□□ -0.1
TRIM6-211ENST00000515022 FER1L4A9Z1Z3 1794 aa14.39□□□□□ -0.11
TRIM6-211ENST00000515022 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
TRIM6-211ENST00000515022 FANCAO15360 1455 aa14.38□□□□□ -0.11
TRIM6-211ENST00000515022 NUP153P49790 1475 aaKnown RBP14.38□□□□□ -0.11
TRIM6-211ENST00000515022 CEBPAP49715 358 aaPredicted RBP14.37□□□□□ -0.11
TRIM6-211ENST00000515022 POGZQ7Z3K3 1410 aa14.37□□□□□ -0.11
TRIM6-211ENST00000515022 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
TRIM6-211ENST00000515022 SAMD9Q5K651 1589 aa14.36□□□□□ -0.11
TRIM6-211ENST00000515022 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
TRIM6-211ENST00000515022 TTC37Q6PGP7 1564 aa14.34□□□□□ -0.11
TRIM6-211ENST00000515022 PLEKHD1A6NEE1 506 aa14.33□□□□□ -0.12
TRIM6-211ENST00000515022 HECW1Q76N89 1606 aa14.33□□□□□ -0.12
TRIM6-211ENST00000515022 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
TRIM6-211ENST00000515022 ZMYM4Q5VZL5 1548 aa14.32□□□□□ -0.12
TRIM6-211ENST00000515022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRIM6-211ENST00000515022 EFCAB5A4FU69 1503 aa14.31□□□□□ -0.12
TRIM6-211ENST00000515022 SPATA31D1Q6ZQQ2 1576 aa14.31□□□□□ -0.12
TRIM6-211ENST00000515022 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
TRIM6-211ENST00000515022 PREX1Q8TCU6 1659 aa14.3□□□□□ -0.12
TRIM6-211ENST00000515022 SCAPERQ9BY12 1400 aa14.28□□□□□ -0.12
TRIM6-211ENST00000515022 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.12
TRIM6-211ENST00000515022 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
TRIM6-211ENST00000515022 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
TRIM6-211ENST00000515022 ATP10AO60312 1499 aa14.25□□□□□ -0.13
TRIM6-211ENST00000515022 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
TRIM6-211ENST00000515022 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
TRIM6-211ENST00000515022 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
TRIM6-211ENST00000515022 UHRF1BP1Q6BDS2 1440 aa14.22□□□□□ -0.13
TRIM6-211ENST00000515022 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
TRIM6-211ENST00000515022 PLCH2O75038 1416 aa14.2□□□□□ -0.14
TRIM6-211ENST00000515022 AFAP1Q8N556 730 aa14.19□□□□□ -0.14
TRIM6-211ENST00000515022 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
TRIM6-211ENST00000515022 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
TRIM6-211ENST00000515022 PTPRTO14522 1441 aa14.17□□□□□ -0.14
TRIM6-211ENST00000515022 EFCAB2Q5VUJ9 269 aa14.17□□□□□ -0.14
TRIM6-211ENST00000515022 C3P01024 1663 aa14.17□□□□□ -0.14
TRIM6-211ENST00000515022 MYO5CQ9NQX4 1742 aa14.16□□□□□ -0.14
TRIM6-211ENST00000515022 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
TRIM6-211ENST00000515022 KIF14Q15058 1648 aa14.14□□□□□ -0.15
TRIM6-211ENST00000515022 DIP2CQ9Y2E4 1556 aa14.13□□□□□ -0.15
TRIM6-211ENST00000515022 ARHGAP5Q13017 1502 aa14.11□□□□□ -0.15
TRIM6-211ENST00000515022 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
TRIM6-211ENST00000515022 ABCA6Q8N139 1617 aa14.11□□□□□ -0.15
TRIM6-211ENST00000515022 ZNF518AQ6AHZ1 1483 aa14.11□□□□□ -0.15
TRIM6-211ENST00000515022 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
TRIM6-211ENST00000515022 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
TRIM6-211ENST00000515022 ESF1Q9H501 851 aaKnown RBP14.1□□□□□ -0.15
TRIM6-211ENST00000515022 ZNF335Q9H4Z2 1342 aaPredicted RBP14.1□□□□□ -0.15
TRIM6-211ENST00000515022 KDM5CP41229 1560 aa14.09□□□□□ -0.15
TRIM6-211ENST00000515022 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.15
TRIM6-211ENST00000515022 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.16
TRIM6-211ENST00000515022 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
TRIM6-211ENST00000515022 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
TRIM6-211ENST00000515022 REREQ9P2R6 1566 aa14.04□□□□□ -0.16
TRIM6-211ENST00000515022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRIM6-211ENST00000515022 CDK11AQ9UQ88 783 aaPredicted RBP14.03□□□□□ -0.16
TRIM6-211ENST00000515022 LRRIQ1Q96JM4 1722 aa14.02□□□□□ -0.16
TRIM6-211ENST00000515022 MLH3Q9UHC1 1453 aa14.02□□□□□ -0.16
TRIM6-211ENST00000515022 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
TRIM6-211ENST00000515022 AGLP35573 1532 aa14.01□□□□□ -0.17
TRIM6-211ENST00000515022 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
TRIM6-211ENST00000515022 HSPA1LP34931 641 aa14□□□□□ -0.17
TRIM6-211ENST00000515022 PIP4K2BP78356 416 aa14□□□□□ -0.17
TRIM6-211ENST00000515022 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
TRIM6-211ENST00000515022 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
TRIM6-211ENST00000515022 ABCC1P33527 1531 aa13.99□□□□□ -0.17
TRIM6-211ENST00000515022 CLIP1P30622 1438 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 EEA1Q15075 1411 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
TRIM6-211ENST00000515022 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
TRIM6-211ENST00000515022 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
TRIM6-211ENST00000515022 CLTCQ00610 1675 aaKnown RBP13.97□□□□□ -0.17
TRIM6-211ENST00000515022 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
TRIM6-211ENST00000515022 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.17
TRIM6-211ENST00000515022 NPATQ14207 1427 aa13.96□□□□□ -0.18
TRIM6-211ENST00000515022 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
TRIM6-211ENST00000515022 MYO3AQ8NEV4 1616 aa13.94□□□□□ -0.18
TRIM6-211ENST00000515022 PKD2Q13563 968 aa13.93□□□□□ -0.18
TRIM6-211ENST00000515022 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
TRIM6-211ENST00000515022 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
TRIM6-211ENST00000515022 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
TRIM6-211ENST00000515022 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
TRIM6-211ENST00000515022 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM6-211ENST00000515022 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
TRIM6-211ENST00000515022 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
TRIM6-211ENST00000515022 GGT6Q6P531 493 aa13.91□□□□□ -0.18
TRIM6-211ENST00000515022 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
TRIM6-211ENST00000515022 PTPRKQ15262 1439 aa13.9□□□□□ -0.18
TRIM6-211ENST00000515022 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
TRIM6-211ENST00000515022 SYCP2Q9BX26 1530 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms