RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
SMAD5-210ENST00000515005 UHRF1BP1Q6BDS2 1440 aa20.74■□□□□ 0.91
SMAD5-210ENST00000515005 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
SMAD5-210ENST00000515005 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
SMAD5-210ENST00000515005 CFAP74Q9C0B2 1584 aa20.7■□□□□ 0.9
SMAD5-210ENST00000515005 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
SMAD5-210ENST00000515005 ATP10AO60312 1499 aa20.65■□□□□ 0.9
SMAD5-210ENST00000515005 UBAP1LF5GYI3 381 aa20.65■□□□□ 0.9
SMAD5-210ENST00000515005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMAD5-210ENST00000515005 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
SMAD5-210ENST00000515005 C9orf84Q5VXU9 1444 aa20.62■□□□□ 0.89
SMAD5-210ENST00000515005 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
SMAD5-210ENST00000515005 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
SMAD5-210ENST00000515005 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
SMAD5-210ENST00000515005 NCOA1Q15788 1441 aa20.58■□□□□ 0.88
SMAD5-210ENST00000515005 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
SMAD5-210ENST00000515005 C3P01024 1663 aa20.56■□□□□ 0.88
SMAD5-210ENST00000515005 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
SMAD5-210ENST00000515005 ZNF335Q9H4Z2 1342 aaPredicted RBP20.54■□□□□ 0.88
SMAD5-210ENST00000515005 HSPA1LP34931 641 aa20.52■□□□□ 0.88
SMAD5-210ENST00000515005 TRAPPC8Q9Y2L5 1435 aa20.5■□□□□ 0.87
SMAD5-210ENST00000515005 CAMSAP1Q5T5Y3 1602 aa20.48■□□□□ 0.87
SMAD5-210ENST00000515005 PLCH2O75038 1416 aa20.47■□□□□ 0.87
SMAD5-210ENST00000515005 NCKAP5LQ9HCH0 1330 aa20.47■□□□□ 0.87
SMAD5-210ENST00000515005 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
SMAD5-210ENST00000515005 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
SMAD5-210ENST00000515005 AFAP1Q8N556 730 aa20.42■□□□□ 0.86
SMAD5-210ENST00000515005 PIP4K2BP78356 416 aa20.41■□□□□ 0.86
SMAD5-210ENST00000515005 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
SMAD5-210ENST00000515005 DIP2CQ9Y2E4 1556 aa20.41■□□□□ 0.86
SMAD5-210ENST00000515005 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.85
SMAD5-210ENST00000515005 MYT1LQ9UL68 1186 aa20.39■□□□□ 0.85
SMAD5-210ENST00000515005 ZNF518AQ6AHZ1 1483 aa20.38■□□□□ 0.85
SMAD5-210ENST00000515005 RANGAP1P46060 587 aaPredicted RBP20.38■□□□□ 0.85
SMAD5-210ENST00000515005 KDM5CP41229 1560 aa20.38■□□□□ 0.85
SMAD5-210ENST00000515005 REREQ9P2R6 1566 aa20.38■□□□□ 0.85
SMAD5-210ENST00000515005 MYO5CQ9NQX4 1742 aa20.35■□□□□ 0.85
SMAD5-210ENST00000515005 ABCA6Q8N139 1617 aa20.35■□□□□ 0.85
SMAD5-210ENST00000515005 AGLP35573 1532 aa20.34■□□□□ 0.85
SMAD5-210ENST00000515005 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
SMAD5-210ENST00000515005 PKD2Q13563 968 aa20.32■□□□□ 0.84
SMAD5-210ENST00000515005 NPATQ14207 1427 aa20.31■□□□□ 0.84
SMAD5-210ENST00000515005 CNTLNQ9NXG0 1405 aa20.31■□□□□ 0.84
SMAD5-210ENST00000515005 TOM1O60784 492 aa20.31■□□□□ 0.84
SMAD5-210ENST00000515005 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
SMAD5-210ENST00000515005 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
SMAD5-210ENST00000515005 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
SMAD5-210ENST00000515005 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
SMAD5-210ENST00000515005 MLH3Q9UHC1 1453 aa20.27■□□□□ 0.84
SMAD5-210ENST00000515005 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
SMAD5-210ENST00000515005 ARHGAP5Q13017 1502 aa20.25■□□□□ 0.83
SMAD5-210ENST00000515005 MROH2AA6NES4 1674 aa20.25■□□□□ 0.83
SMAD5-210ENST00000515005 ZNF142P52746 1687 aaPredicted RBP20.24■□□□□ 0.83
SMAD5-210ENST00000515005 KIF14Q15058 1648 aa20.24■□□□□ 0.83
SMAD5-210ENST00000515005 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
SMAD5-210ENST00000515005 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
SMAD5-210ENST00000515005 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
SMAD5-210ENST00000515005 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
SMAD5-210ENST00000515005 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
SMAD5-210ENST00000515005 CPS1P31327 1500 aa20.19■□□□□ 0.82
SMAD5-210ENST00000515005 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
SMAD5-210ENST00000515005 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
SMAD5-210ENST00000515005 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
SMAD5-210ENST00000515005 PTPRKQ15262 1439 aa20.15■□□□□ 0.82
SMAD5-210ENST00000515005 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
SMAD5-210ENST00000515005 CDC42BPBQ9Y5S2 1711 aa20.14■□□□□ 0.81
SMAD5-210ENST00000515005 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
SMAD5-210ENST00000515005 ABCC1P33527 1531 aa20.12■□□□□ 0.81
SMAD5-210ENST00000515005 ITSN2Q9NZM3 1697 aa20.11■□□□□ 0.81
SMAD5-210ENST00000515005 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
SMAD5-210ENST00000515005 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
SMAD5-210ENST00000515005 NEURL4Q96JN8 1562 aa20.09■□□□□ 0.81
SMAD5-210ENST00000515005 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
SMAD5-210ENST00000515005 POLR1AO95602 1720 aaPredicted RBP20.08■□□□□ 0.81
SMAD5-210ENST00000515005 A2ML1A8K2U0 1454 aa20.06■□□□□ 0.8
SMAD5-210ENST00000515005 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
SMAD5-210ENST00000515005 POTEAQ6S8J7 498 aa20.05■□□□□ 0.8
SMAD5-210ENST00000515005 CLIP1P30622 1438 aa20.03■□□□□ 0.8
SMAD5-210ENST00000515005 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
SMAD5-210ENST00000515005 SAMD9LQ8IVG5 1584 aa20.01■□□□□ 0.79
SMAD5-210ENST00000515005 GGT6Q6P531 493 aa20■□□□□ 0.79
SMAD5-210ENST00000515005 SETD1AO15047 1707 aaKnown RBP19.97■□□□□ 0.79
SMAD5-210ENST00000515005 SPAG9O60271 1321 aaKnown RBP19.97■□□□□ 0.79
SMAD5-210ENST00000515005 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
SMAD5-210ENST00000515005 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
SMAD5-210ENST00000515005 STRCP1A6NGW2 1772 aa19.96■□□□□ 0.79
SMAD5-210ENST00000515005 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
SMAD5-210ENST00000515005 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
SMAD5-210ENST00000515005 LRRC7Q96NW7 1537 aa19.95■□□□□ 0.78
SMAD5-210ENST00000515005 A2MP01023 1474 aa19.94■□□□□ 0.78
SMAD5-210ENST00000515005 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
SMAD5-210ENST00000515005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMAD5-210ENST00000515005 CDC42BPAQ5VT25 1732 aa19.93■□□□□ 0.78
SMAD5-210ENST00000515005 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
SMAD5-210ENST00000515005 FBXO31Q5XUX0 539 aaPredicted RBP19.92■□□□□ 0.78
SMAD5-210ENST00000515005 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
SMAD5-210ENST00000515005 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
SMAD5-210ENST00000515005 SYCP2Q9BX26 1530 aa19.91■□□□□ 0.78
SMAD5-210ENST00000515005 HNRNPMP52272 730 aaKnown RBP eCLIP19.9■□□□□ 0.783e-6■■■■■ 28.4
SMAD5-210ENST00000515005 TNRQ92752 1358 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms