RNA–Protein interactions for RNA: ENST00000513349.5

DROSHA-220, Transcript of drosha ribonuclease III, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DROSHA, Length 4,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-220ENST00000513349 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
DROSHA-220ENST00000513349 PKD2Q13563 968 aa11.66□□□□□ -0.54
DROSHA-220ENST00000513349 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
DROSHA-220ENST00000513349 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
DROSHA-220ENST00000513349 FOXD1Q16676 465 aa11.66□□□□□ -0.54
DROSHA-220ENST00000513349 FTSJ3Q8IY81 847 aaKnown RBP11.65□□□□□ -0.54
DROSHA-220ENST00000513349 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.55
DROSHA-220ENST00000513349 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.55
DROSHA-220ENST00000513349 FGD6Q6ZV73 1430 aa11.64□□□□□ -0.55
DROSHA-220ENST00000513349 PTMSP20962 102 aa11.64□□□□□ -0.55
DROSHA-220ENST00000513349 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
DROSHA-220ENST00000513349 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
DROSHA-220ENST00000513349 PRXQ9BXM0 1461 aa11.64□□□□□ -0.55
DROSHA-220ENST00000513349 CHMP4BQ9H444 224 aaKnown RBP11.63□□□□□ -0.55
DROSHA-220ENST00000513349 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
DROSHA-220ENST00000513349 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
DROSHA-220ENST00000513349 CHMP7Q8WUX9 453 aaPredicted RBP11.63□□□□□ -0.55
DROSHA-220ENST00000513349 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
DROSHA-220ENST00000513349 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
DROSHA-220ENST00000513349 NCLP19338 710 aaKnown RBP11.62□□□□□ -0.55
DROSHA-220ENST00000513349 FRAT1Q92837 279 aaPredicted RBP11.62□□□□□ -0.55
DROSHA-220ENST00000513349 WASHC2AQ641Q2 1341 aa11.62□□□□□ -0.55
DROSHA-220ENST00000513349 EXOC6Q8TAG9 804 aa11.62□□□□□ -0.55
DROSHA-220ENST00000513349 CUX1P39880 1505 aa11.61□□□□□ -0.55
DROSHA-220ENST00000513349 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
DROSHA-220ENST00000513349 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
DROSHA-220ENST00000513349 IGF1RP08069 1367 aa11.61□□□□□ -0.55
DROSHA-220ENST00000513349 HSP90AB1P08238 724 aaKnown RBP11.6□□□□□ -0.55
DROSHA-220ENST00000513349 GOLGA6L3A6NEY3 463 aa11.6□□□□□ -0.55
DROSHA-220ENST00000513349 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
DROSHA-220ENST00000513349 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
DROSHA-220ENST00000513349 MSH5O43196 834 aa11.59□□□□□ -0.55
DROSHA-220ENST00000513349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.59□□□□□ -0.55
DROSHA-220ENST00000513349 USP47Q96K76 1375 aa11.59□□□□□ -0.55
DROSHA-220ENST00000513349 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
DROSHA-220ENST00000513349 PMFBP1Q8TBY8 1022 aa11.58□□□□□ -0.56
DROSHA-220ENST00000513349 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
DROSHA-220ENST00000513349 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
DROSHA-220ENST00000513349 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
DROSHA-220ENST00000513349 GBP4Q96PP9 640 aa11.57□□□□□ -0.56
DROSHA-220ENST00000513349 NUP155O75694 1391 aa11.57□□□□□ -0.56
DROSHA-220ENST00000513349 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
DROSHA-220ENST00000513349 CASC1Q6TDU7 716 aa11.57□□□□□ -0.56
DROSHA-220ENST00000513349 RWDD1Q9H446 243 aaPredicted RBP11.57□□□□□ -0.56
DROSHA-220ENST00000513349 CASKIN1Q8WXD9 1431 aa11.57□□□□□ -0.56
DROSHA-220ENST00000513349 MSNP26038 577 aaKnown RBP11.57□□□□□ -0.56
DROSHA-220ENST00000513349 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
DROSHA-220ENST00000513349 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
DROSHA-220ENST00000513349 TIAM1Q13009 1591 aa11.56□□□□□ -0.56
DROSHA-220ENST00000513349 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
DROSHA-220ENST00000513349 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
DROSHA-220ENST00000513349 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
DROSHA-220ENST00000513349 FYCO1Q9BQS8 1478 aa11.55□□□□□ -0.56
DROSHA-220ENST00000513349 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
DROSHA-220ENST00000513349 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
DROSHA-220ENST00000513349 HFM1A2PYH4 1435 aa11.53□□□□□ -0.56
DROSHA-220ENST00000513349 CRBNQ96SW2 442 aa11.53□□□□□ -0.56
DROSHA-220ENST00000513349 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
DROSHA-220ENST00000513349 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
DROSHA-220ENST00000513349 ST20-MTHFSA0A0A6YYL1 179 aa11.52□□□□□ -0.56
DROSHA-220ENST00000513349 NFKBIBQ15653 356 aa11.52□□□□□ -0.56
DROSHA-220ENST00000513349 NGEFQ8N5V2 710 aa11.51□□□□□ -0.57
DROSHA-220ENST00000513349 CGNL1Q0VF96 1302 aa11.51□□□□□ -0.57
DROSHA-220ENST00000513349 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
DROSHA-220ENST00000513349 HSP90AA2PQ14568 343 aaPredicted RBP11.5□□□□□ -0.57
DROSHA-220ENST00000513349 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
DROSHA-220ENST00000513349 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
DROSHA-220ENST00000513349 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
DROSHA-220ENST00000513349 GZF1Q9H116 711 aaPredicted RBP11.49□□□□□ -0.57
DROSHA-220ENST00000513349 SLC4A3P48751 1232 aa11.49□□□□□ -0.57
DROSHA-220ENST00000513349 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
DROSHA-220ENST00000513349 EFCAB5A4FU69 1503 aa11.49□□□□□ -0.57
DROSHA-220ENST00000513349 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
DROSHA-220ENST00000513349 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
DROSHA-220ENST00000513349 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
DROSHA-220ENST00000513349 PLIN1O60240 522 aa11.48□□□□□ -0.57
DROSHA-220ENST00000513349 EIF3AQ14152 1382 aaKnown RBP11.48□□□□□ -0.57
DROSHA-220ENST00000513349 MORC1Q86VD1 984 aa11.48□□□□□ -0.57
DROSHA-220ENST00000513349 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
DROSHA-220ENST00000513349 FGD5Q6ZNL6 1462 aa11.47□□□□□ -0.57
DROSHA-220ENST00000513349 AKNAQ7Z591 1439 aa11.47□□□□□ -0.57
DROSHA-220ENST00000513349 E9PSI1 815 aa11.46□□□□□ -0.57
DROSHA-220ENST00000513349 AAMPQ13685 434 aa11.45□□□□□ -0.58
DROSHA-220ENST00000513349 CARMIL2Q6F5E8 1435 aa11.45□□□□□ -0.58
DROSHA-220ENST00000513349 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
DROSHA-220ENST00000513349 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
DROSHA-220ENST00000513349 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
DROSHA-220ENST00000513349 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
DROSHA-220ENST00000513349 PANK3Q9H999 370 aa11.45□□□□□ -0.58
DROSHA-220ENST00000513349 FAM43AQ8N2R8 423 aa11.44□□□□□ -0.58
DROSHA-220ENST00000513349 PNISRQ8TF01 805 aaKnown RBP11.44□□□□□ -0.58
DROSHA-220ENST00000513349 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
DROSHA-220ENST00000513349 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
DROSHA-220ENST00000513349 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
DROSHA-220ENST00000513349 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
DROSHA-220ENST00000513349 KANK1Q14678 1352 aa11.43□□□□□ -0.58
DROSHA-220ENST00000513349 CCDC144AA2RUR9 1427 aa11.43□□□□□ -0.58
DROSHA-220ENST00000513349 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
DROSHA-220ENST00000513349 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
DROSHA-220ENST00000513349 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms