RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 ZFYVE16Q7Z3T8 1539 aa16.2■□□□□ 0.18
PTPN20-225ENST00000511769 RICTORQ6R327 1708 aa16.2■□□□□ 0.18
PTPN20-225ENST00000511769 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
PTPN20-225ENST00000511769 EFCAB5A4FU69 1503 aa16.18■□□□□ 0.18
PTPN20-225ENST00000511769 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
PTPN20-225ENST00000511769 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
PTPN20-225ENST00000511769 PIP4K2BP78356 416 aa16.15■□□□□ 0.18
PTPN20-225ENST00000511769 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.17
PTPN20-225ENST00000511769 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
PTPN20-225ENST00000511769 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
PTPN20-225ENST00000511769 ATP10BO94823 1461 aa16.11■□□□□ 0.17
PTPN20-225ENST00000511769 EEA1Q15075 1411 aa16.08■□□□□ 0.17
PTPN20-225ENST00000511769 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-225ENST00000511769 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
PTPN20-225ENST00000511769 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.16
PTPN20-225ENST00000511769 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
PTPN20-225ENST00000511769 SETD1BQ9UPS6 1966 aaKnown RBP16.05■□□□□ 0.16
PTPN20-225ENST00000511769 C9orf84Q5VXU9 1444 aa16.04■□□□□ 0.16
PTPN20-225ENST00000511769 CFAP74Q9C0B2 1584 aa16.04■□□□□ 0.16
PTPN20-225ENST00000511769 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
PTPN20-225ENST00000511769 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
PTPN20-225ENST00000511769 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
PTPN20-225ENST00000511769 NCKAP5LQ9HCH0 1330 aa16.03■□□□□ 0.16
PTPN20-225ENST00000511769 ATP10AO60312 1499 aa16.02■□□□□ 0.16
PTPN20-225ENST00000511769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
PTPN20-225ENST00000511769 TOM1O60784 492 aa16.01■□□□□ 0.15
PTPN20-225ENST00000511769 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
PTPN20-225ENST00000511769 C3P01024 1663 aa16■□□□□ 0.15
PTPN20-225ENST00000511769 RGS17Q9UGC6 210 aaPredicted RBP16■□□□□ 0.15
PTPN20-225ENST00000511769 TRAPPC8Q9Y2L5 1435 aa15.98■□□□□ 0.15
PTPN20-225ENST00000511769 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
PTPN20-225ENST00000511769 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
PTPN20-225ENST00000511769 SCAPERQ9BY12 1400 aa15.92■□□□□ 0.14
PTPN20-225ENST00000511769 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
PTPN20-225ENST00000511769 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
PTPN20-225ENST00000511769 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
PTPN20-225ENST00000511769 PKD2Q13563 968 aa15.89■□□□□ 0.13
PTPN20-225ENST00000511769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTPN20-225ENST00000511769 POTEAQ6S8J7 498 aa15.88■□□□□ 0.13
PTPN20-225ENST00000511769 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
PTPN20-225ENST00000511769 RAPGEF6Q8TEU7 1601 aa15.87■□□□□ 0.13
PTPN20-225ENST00000511769 CPS1P31327 1500 aa15.86■□□□□ 0.13
PTPN20-225ENST00000511769 PLA2R1Q13018 1463 aa15.85■□□□□ 0.13
PTPN20-225ENST00000511769 PTPRKQ15262 1439 aa15.85■□□□□ 0.13
PTPN20-225ENST00000511769 ALKQ9UM73 1620 aa15.84■□□□□ 0.13
PTPN20-225ENST00000511769 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
PTPN20-225ENST00000511769 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
PTPN20-225ENST00000511769 PLEKHD1A6NEE1 506 aa15.83■□□□□ 0.12
PTPN20-225ENST00000511769 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
PTPN20-225ENST00000511769 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
PTPN20-225ENST00000511769 NPATQ14207 1427 aa15.81■□□□□ 0.12
PTPN20-225ENST00000511769 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
PTPN20-225ENST00000511769 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
PTPN20-225ENST00000511769 CNTLNQ9NXG0 1405 aa15.8■□□□□ 0.12
PTPN20-225ENST00000511769 DIP2CQ9Y2E4 1556 aa15.8■□□□□ 0.12
PTPN20-225ENST00000511769 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
PTPN20-225ENST00000511769 AGLP35573 1532 aa15.78■□□□□ 0.12
PTPN20-225ENST00000511769 REREQ9P2R6 1566 aa15.77■□□□□ 0.12
PTPN20-225ENST00000511769 MYO3AQ8NEV4 1616 aa15.77■□□□□ 0.12
PTPN20-225ENST00000511769 ZNF142P52746 1687 aaPredicted RBP15.77■□□□□ 0.12
PTPN20-225ENST00000511769 CEP170BQ9Y4F5 1589 aaPredicted RBP15.76■□□□□ 0.11
PTPN20-225ENST00000511769 ZNF518AQ6AHZ1 1483 aa15.75■□□□□ 0.11
PTPN20-225ENST00000511769 PLCH2O75038 1416 aa15.75■□□□□ 0.11
PTPN20-225ENST00000511769 UPF1Q92900 1129 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN20-225ENST00000511769 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
PTPN20-225ENST00000511769 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
PTPN20-225ENST00000511769 KDM5CP41229 1560 aa15.73■□□□□ 0.11
PTPN20-225ENST00000511769 MROH2AA6NES4 1674 aa15.71■□□□□ 0.11
PTPN20-225ENST00000511769 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
PTPN20-225ENST00000511769 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
PTPN20-225ENST00000511769 SAMD9Q5K651 1589 aa15.67■□□□□ 0.1
PTPN20-225ENST00000511769 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
PTPN20-225ENST00000511769 NEURL4Q96JN8 1562 aa15.67■□□□□ 0.1
PTPN20-225ENST00000511769 RNF17Q9BXT8 1623 aaKnown RBP15.66■□□□□ 0.1
PTPN20-225ENST00000511769 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
PTPN20-225ENST00000511769 MYO5CQ9NQX4 1742 aa15.63■□□□□ 0.09
PTPN20-225ENST00000511769 MLH3Q9UHC1 1453 aa15.63■□□□□ 0.09
PTPN20-225ENST00000511769 SRCAPQ6ZRS2 3230 aa15.63■□□□□ 0.09
PTPN20-225ENST00000511769 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
PTPN20-225ENST00000511769 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
PTPN20-225ENST00000511769 DNMT1P26358 1616 aaKnown RBP15.61■□□□□ 0.09
PTPN20-225ENST00000511769 CLTCQ00610 1675 aaKnown RBP15.61■□□□□ 0.09
PTPN20-225ENST00000511769 A2ML1A8K2U0 1454 aa15.6■□□□□ 0.09
PTPN20-225ENST00000511769 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
PTPN20-225ENST00000511769 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
PTPN20-225ENST00000511769 ARHGAP5Q13017 1502 aa15.59■□□□□ 0.09
PTPN20-225ENST00000511769 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
PTPN20-225ENST00000511769 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
PTPN20-225ENST00000511769 CLIP1P30622 1438 aa15.56■□□□□ 0.08
PTPN20-225ENST00000511769 SYNMO15061 1565 aa15.56■□□□□ 0.08
PTPN20-225ENST00000511769 NPHP4O75161 1426 aaPredicted RBP15.53■□□□□ 0.08
PTPN20-225ENST00000511769 STRCP1A6NGW2 1772 aa15.53■□□□□ 0.08
PTPN20-225ENST00000511769 KIDINS220Q9ULH0 1771 aa15.52■□□□□ 0.08
PTPN20-225ENST00000511769 ANKLE2Q86XL3 938 aa15.52■□□□□ 0.08
PTPN20-225ENST00000511769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN20-225ENST00000511769 KIF14Q15058 1648 aa15.49■□□□□ 0.07
PTPN20-225ENST00000511769 FAM135BQ49AJ0 1406 aa15.48■□□□□ 0.07
PTPN20-225ENST00000511769 MED14O60244 1454 aa15.47■□□□□ 0.07
PTPN20-225ENST00000511769 ABCC1P33527 1531 aa15.47■□□□□ 0.07
PTPN20-225ENST00000511769 IQGAP1P46940 1657 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms