RNA–Protein interactions for RNA: ENST00000510733.1

LRAT-207, Transcript of lecithin retinol acyltransferase, humanhuman

TSL 1 (best)

Gene LRAT, Length 5,002 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-207ENST00000510733 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
LRAT-207ENST00000510733 NBR1Q14596 966 aa12.4□□□□□ -0.42
LRAT-207ENST00000510733 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
LRAT-207ENST00000510733 EIF3AQ14152 1382 aaKnown RBP12.39□□□□□ -0.43
LRAT-207ENST00000510733 NESP48681 1621 aa12.39□□□□□ -0.43
LRAT-207ENST00000510733 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
LRAT-207ENST00000510733 CC2D1BQ5T0F9 858 aaKnown RBP12.38□□□□□ -0.43
LRAT-207ENST00000510733 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
LRAT-207ENST00000510733 GGT6Q6P531 493 aa12.37□□□□□ -0.43
LRAT-207ENST00000510733 FRAT1Q92837 279 aaPredicted RBP12.37□□□□□ -0.43
LRAT-207ENST00000510733 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
LRAT-207ENST00000510733 PKD2Q13563 968 aa12.37□□□□□ -0.43
LRAT-207ENST00000510733 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
LRAT-207ENST00000510733 FGD1P98174 961 aa12.36□□□□□ -0.43
LRAT-207ENST00000510733 MLECQ14165 292 aa12.36□□□□□ -0.43
LRAT-207ENST00000510733 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
LRAT-207ENST00000510733 MCCP23508 829 aa12.35□□□□□ -0.43
LRAT-207ENST00000510733 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
LRAT-207ENST00000510733 GOLGA6L6A8MZA4 724 aa12.35□□□□□ -0.43
LRAT-207ENST00000510733 NRDCO43847 1150 aa12.35□□□□□ -0.43
LRAT-207ENST00000510733 KCNJ4P48050 445 aa12.35□□□□□ -0.43
LRAT-207ENST00000510733 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
LRAT-207ENST00000510733 TNNT2P45379 298 aaPredicted RBP12.34□□□□□ -0.43
LRAT-207ENST00000510733 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
LRAT-207ENST00000510733 RALBP1Q15311 655 aa12.34□□□□□ -0.43
LRAT-207ENST00000510733 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
LRAT-207ENST00000510733 NUP155O75694 1391 aa12.33□□□□□ -0.44
LRAT-207ENST00000510733 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
LRAT-207ENST00000510733 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
LRAT-207ENST00000510733 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
LRAT-207ENST00000510733 CFTRP13569 1480 aa12.32□□□□□ -0.44
LRAT-207ENST00000510733 EID1Q9Y6B2 187 aa12.31□□□□□ -0.44
LRAT-207ENST00000510733 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
LRAT-207ENST00000510733 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
LRAT-207ENST00000510733 RAD54L2Q9Y4B4 1467 aa12.3□□□□□ -0.44
LRAT-207ENST00000510733 ROCK2O75116 1388 aaKnown RBP12.3□□□□□ -0.44
LRAT-207ENST00000510733 RGS3P49796 1198 aa12.29□□□□□ -0.44
LRAT-207ENST00000510733 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
LRAT-207ENST00000510733 SPAG9O60271 1321 aaKnown RBP12.29□□□□□ -0.44
LRAT-207ENST00000510733 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
LRAT-207ENST00000510733 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
LRAT-207ENST00000510733 HSCBQ8IWL3 235 aa12.28□□□□□ -0.44
LRAT-207ENST00000510733 GOLGA6L4A6NEF3 574 aa12.27□□□□□ -0.45
LRAT-207ENST00000510733 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.45
LRAT-207ENST00000510733 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
LRAT-207ENST00000510733 KIF3BO15066 747 aa12.26□□□□□ -0.45
LRAT-207ENST00000510733 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
LRAT-207ENST00000510733 LMOD3Q0VAK6 560 aa12.26□□□□□ -0.45
LRAT-207ENST00000510733 STK26Q9P289 416 aa12.26□□□□□ -0.45
LRAT-207ENST00000510733 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
LRAT-207ENST00000510733 PTMSP20962 102 aa12.25□□□□□ -0.45
LRAT-207ENST00000510733 PHLDB1Q86UU1 1377 aa12.24□□□□□ -0.45
LRAT-207ENST00000510733 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
LRAT-207ENST00000510733 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
LRAT-207ENST00000510733 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
LRAT-207ENST00000510733 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
LRAT-207ENST00000510733 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
LRAT-207ENST00000510733 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
LRAT-207ENST00000510733 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
LRAT-207ENST00000510733 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
LRAT-207ENST00000510733 DNTTIP2Q5QJE6 756 aaKnown RBP12.23□□□□□ -0.45
LRAT-207ENST00000510733 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
LRAT-207ENST00000510733 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
LRAT-207ENST00000510733 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
LRAT-207ENST00000510733 SOX12O15370 315 aa12.22□□□□□ -0.45
LRAT-207ENST00000510733 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
LRAT-207ENST00000510733 L1TD1Q5T7N2 865 aaKnown RBP12.22□□□□□ -0.45
LRAT-207ENST00000510733 NAP1L2Q9ULW6 460 aaPredicted RBP12.21□□□□□ -0.45
LRAT-207ENST00000510733 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
LRAT-207ENST00000510733 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
LRAT-207ENST00000510733 HMMRO75330 724 aa12.2□□□□□ -0.46
LRAT-207ENST00000510733 PDE3BQ13370 1112 aa12.2□□□□□ -0.46
LRAT-207ENST00000510733 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
LRAT-207ENST00000510733 IGF1RP08069 1367 aa12.2□□□□□ -0.46
LRAT-207ENST00000510733 NOP58Q9Y2X3 529 aaKnown RBP12.19□□□□□ -0.46
LRAT-207ENST00000510733 MRC2Q9UBG0 1479 aa12.19□□□□□ -0.46
LRAT-207ENST00000510733 GPATCH3Q96I76 525 aa12.19□□□□□ -0.46
LRAT-207ENST00000510733 PMFBP1Q8TBY8 1022 aa12.19□□□□□ -0.46
LRAT-207ENST00000510733 NLRP13Q86W25 1043 aa12.18□□□□□ -0.46
LRAT-207ENST00000510733 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
LRAT-207ENST00000510733 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
LRAT-207ENST00000510733 RCAN3Q9UKA8 241 aa12.17□□□□□ -0.46
LRAT-207ENST00000510733 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
LRAT-207ENST00000510733 PTPRGP23470 1445 aa12.16□□□□□ -0.46
LRAT-207ENST00000510733 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.46
LRAT-207ENST00000510733 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
LRAT-207ENST00000510733 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
LRAT-207ENST00000510733 VGFO15240 615 aaPredicted RBP12.15□□□□□ -0.46
LRAT-207ENST00000510733 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
LRAT-207ENST00000510733 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
LRAT-207ENST00000510733 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
LRAT-207ENST00000510733 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
LRAT-207ENST00000510733 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
LRAT-207ENST00000510733 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
LRAT-207ENST00000510733 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
LRAT-207ENST00000510733 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
LRAT-207ENST00000510733 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
LRAT-207ENST00000510733 AMPHP49418 695 aa12.13□□□□□ -0.47
LRAT-207ENST00000510733 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
LRAT-207ENST00000510733 GORABQ5T7V8 394 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms