RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
TRIO-214ENST00000509967 MPHOSPH9Q99550 1183 aa11.89□□□□□ -0.51
TRIO-214ENST00000509967 L1TD1Q5T7N2 865 aaKnown RBP11.89□□□□□ -0.51
TRIO-214ENST00000509967 UACAQ9BZF9 1416 aa11.88□□□□□ -0.51
TRIO-214ENST00000509967 EFCAB2Q5VUJ9 269 aa11.88□□□□□ -0.51
TRIO-214ENST00000509967 NGEFQ8N5V2 710 aa11.88□□□□□ -0.51
TRIO-214ENST00000509967 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
TRIO-214ENST00000509967 POGKQ9P215 609 aa11.88□□□□□ -0.51
TRIO-214ENST00000509967 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
TRIO-214ENST00000509967 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
TRIO-214ENST00000509967 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
TRIO-214ENST00000509967 PKD2Q13563 968 aa11.86□□□□□ -0.51
TRIO-214ENST00000509967 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
TRIO-214ENST00000509967 DHX57Q6P158 1386 aaKnown RBP11.86□□□□□ -0.51
TRIO-214ENST00000509967 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
TRIO-214ENST00000509967 NUP155O75694 1391 aa11.84□□□□□ -0.51
TRIO-214ENST00000509967 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
TRIO-214ENST00000509967 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
TRIO-214ENST00000509967 MCCP23508 829 aa11.83□□□□□ -0.52
TRIO-214ENST00000509967 GOLGA6L6A8MZA4 724 aa11.82□□□□□ -0.52
TRIO-214ENST00000509967 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
TRIO-214ENST00000509967 HSCBQ8IWL3 235 aa11.82□□□□□ -0.52
TRIO-214ENST00000509967 MORC1Q86VD1 984 aa11.82□□□□□ -0.52
TRIO-214ENST00000509967 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
TRIO-214ENST00000509967 HDGFL2Q7Z4V5 671 aaPredicted RBP11.81□□□□□ -0.52
TRIO-214ENST00000509967 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
TRIO-214ENST00000509967 NRDCO43847 1150 aa11.81□□□□□ -0.52
TRIO-214ENST00000509967 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
TRIO-214ENST00000509967 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
TRIO-214ENST00000509967 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
TRIO-214ENST00000509967 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
TRIO-214ENST00000509967 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
TRIO-214ENST00000509967 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
TRIO-214ENST00000509967 EFCAB5A4FU69 1503 aa11.79□□□□□ -0.52
TRIO-214ENST00000509967 CDK11BP21127 795 aaKnown RBP11.78□□□□□ -0.52
TRIO-214ENST00000509967 MYOM3Q5VTT5 1437 aa11.78□□□□□ -0.52
TRIO-214ENST00000509967 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
TRIO-214ENST00000509967 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
TRIO-214ENST00000509967 NESP48681 1621 aa11.77□□□□□ -0.52
TRIO-214ENST00000509967 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
TRIO-214ENST00000509967 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
TRIO-214ENST00000509967 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
TRIO-214ENST00000509967 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
TRIO-214ENST00000509967 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
TRIO-214ENST00000509967 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
TRIO-214ENST00000509967 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
TRIO-214ENST00000509967 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
TRIO-214ENST00000509967 GBP4Q96PP9 640 aa11.75□□□□□ -0.53
TRIO-214ENST00000509967 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
TRIO-214ENST00000509967 AAMPQ13685 434 aa11.74□□□□□ -0.53
TRIO-214ENST00000509967 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
TRIO-214ENST00000509967 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
TRIO-214ENST00000509967 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
TRIO-214ENST00000509967 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
TRIO-214ENST00000509967 RGS3P49796 1198 aa11.73□□□□□ -0.53
TRIO-214ENST00000509967 U2SURPO15042 1029 aaKnown RBP11.73□□□□□ -0.53
TRIO-214ENST00000509967 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
TRIO-214ENST00000509967 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
TRIO-214ENST00000509967 CFTRP13569 1480 aa11.73□□□□□ -0.53
TRIO-214ENST00000509967 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
TRIO-214ENST00000509967 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
TRIO-214ENST00000509967 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
TRIO-214ENST00000509967 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
TRIO-214ENST00000509967 GAPVD1Q14C86 1478 aa11.71□□□□□ -0.53
TRIO-214ENST00000509967 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
TRIO-214ENST00000509967 RRBP1Q9P2E9 1410 aaKnown RBP11.71□□□□□ -0.53
TRIO-214ENST00000509967 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
TRIO-214ENST00000509967 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.54
TRIO-214ENST00000509967 IGF1RP08069 1367 aa11.71□□□□□ -0.54
TRIO-214ENST00000509967 SPAG9O60271 1321 aaKnown RBP11.71□□□□□ -0.54
TRIO-214ENST00000509967 HTATSF1O43719 755 aaKnown RBP11.7□□□□□ -0.54
TRIO-214ENST00000509967 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
TRIO-214ENST00000509967 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
TRIO-214ENST00000509967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.69□□□□□ -0.541e-7■■■□□ 17.2
TRIO-214ENST00000509967 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
TRIO-214ENST00000509967 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
TRIO-214ENST00000509967 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
TRIO-214ENST00000509967 HMMRO75330 724 aa11.68□□□□□ -0.54
TRIO-214ENST00000509967 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
TRIO-214ENST00000509967 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
TRIO-214ENST00000509967 OS9Q13438 667 aaPredicted RBP11.68□□□□□ -0.54
TRIO-214ENST00000509967 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
TRIO-214ENST00000509967 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
TRIO-214ENST00000509967 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
TRIO-214ENST00000509967 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
TRIO-214ENST00000509967 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
TRIO-214ENST00000509967 LAMC3Q9Y6N6 1575 aa11.66□□□□□ -0.54
TRIO-214ENST00000509967 DNTTIP2Q5QJE6 756 aaKnown RBP11.65□□□□□ -0.54
TRIO-214ENST00000509967 CENPJQ9HC77 1338 aaPredicted RBP11.65□□□□□ -0.54
TRIO-214ENST00000509967 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
TRIO-214ENST00000509967 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
TRIO-214ENST00000509967 RAD54L2Q9Y4B4 1467 aa11.65□□□□□ -0.54
TRIO-214ENST00000509967 USP47Q96K76 1375 aa11.65□□□□□ -0.54
TRIO-214ENST00000509967 GOLGA6L4A6NEF3 574 aa11.65□□□□□ -0.54
TRIO-214ENST00000509967 FANCIQ9NVI1 1328 aa11.65□□□□□ -0.55
TRIO-214ENST00000509967 MSNP26038 577 aaKnown RBP11.64□□□□□ -0.55
TRIO-214ENST00000509967 PRKRIP1Q9H875 184 aaPredicted RBP11.64□□□□□ -0.55
TRIO-214ENST00000509967 SCAPERQ9BY12 1400 aa11.64□□□□□ -0.55
TRIO-214ENST00000509967 CNTLNQ9NXG0 1405 aa11.64□□□□□ -0.55
TRIO-214ENST00000509967 KCNJ4P48050 445 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms