RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
CAST-228ENST00000509903 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
CAST-228ENST00000509903 ERICH6Q7L0X2 663 aa10.89□□□□□ -0.67
CAST-228ENST00000509903 PLCD3Q8N3E9 789 aa10.88□□□□□ -0.67
CAST-228ENST00000509903 PODXL2Q9NZ53 605 aa10.88□□□□□ -0.67
CAST-228ENST00000509903 MIER1Q8N108 512 aa10.87□□□□□ -0.67
CAST-228ENST00000509903 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
CAST-228ENST00000509903 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
CAST-228ENST00000509903 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
CAST-228ENST00000509903 SNAPC4Q5SXM2 1469 aa10.86□□□□□ -0.67
CAST-228ENST00000509903 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
CAST-228ENST00000509903 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
CAST-228ENST00000509903 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
CAST-228ENST00000509903 YTHDC1Q96MU7 727 aaKnown RBP10.85□□□□□ -0.67
CAST-228ENST00000509903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAST-228ENST00000509903 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
CAST-228ENST00000509903 MRC2Q9UBG0 1479 aa10.83□□□□□ -0.68
CAST-228ENST00000509903 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
CAST-228ENST00000509903 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
CAST-228ENST00000509903 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
CAST-228ENST00000509903 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
CAST-228ENST00000509903 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
CAST-228ENST00000509903 BRPF1P55201 1214 aaPredicted RBP10.8□□□□□ -0.68
CAST-228ENST00000509903 ADAMTS12P58397 1594 aa10.79□□□□□ -0.68
CAST-228ENST00000509903 LRRIQ1Q96JM4 1722 aa10.79□□□□□ -0.68
CAST-228ENST00000509903 EHBP1L1Q8N3D4 1523 aa10.79□□□□□ -0.68
CAST-228ENST00000509903 NCOA2Q15596 1464 aa10.78□□□□□ -0.68
CAST-228ENST00000509903 IQGAP2Q13576 1575 aa10.78□□□□□ -0.68
CAST-228ENST00000509903 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
CAST-228ENST00000509903 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.68
CAST-228ENST00000509903 MYOM3Q5VTT5 1437 aa10.77□□□□□ -0.69
CAST-228ENST00000509903 IFT140Q96RY7 1462 aa10.76□□□□□ -0.69
CAST-228ENST00000509903 HECW1Q76N89 1606 aa10.75□□□□□ -0.69
CAST-228ENST00000509903 SIN3AQ96ST3 1273 aa10.75□□□□□ -0.69
CAST-228ENST00000509903 HFM1A2PYH4 1435 aa10.74□□□□□ -0.69
CAST-228ENST00000509903 WDR62O43379 1518 aa10.73□□□□□ -0.69
CAST-228ENST00000509903 UGGT2Q9NYU1 1516 aa10.73□□□□□ -0.69
CAST-228ENST00000509903 ZNF608Q9ULD9 1512 aaPredicted RBP10.72□□□□□ -0.69
CAST-228ENST00000509903 PTPN23Q9H3S7 1636 aa10.72□□□□□ -0.69
CAST-228ENST00000509903 PTPRKQ15262 1439 aa10.72□□□□□ -0.69
CAST-228ENST00000509903 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.7
CAST-228ENST00000509903 MAGI3Q5TCQ9 1506 aa10.71□□□□□ -0.7
CAST-228ENST00000509903 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
CAST-228ENST00000509903 UACAQ9BZF9 1416 aa10.7□□□□□ -0.7
CAST-228ENST00000509903 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
CAST-228ENST00000509903 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
CAST-228ENST00000509903 NAIPQ13075 1403 aa10.69□□□□□ -0.7
CAST-228ENST00000509903 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
CAST-228ENST00000509903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAST-228ENST00000509903 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
CAST-228ENST00000509903 KIAA0586Q9BVV6 1533 aa10.68□□□□□ -0.7
CAST-228ENST00000509903 TONSLQ96HA7 1378 aa10.68□□□□□ -0.7
CAST-228ENST00000509903 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
CAST-228ENST00000509903 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
CAST-228ENST00000509903 EIF4G3O43432 1585 aaKnown RBP10.67□□□□□ -0.7
CAST-228ENST00000509903 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
CAST-228ENST00000509903 GRIN2AQ12879 1464 aa10.66□□□□□ -0.7
CAST-228ENST00000509903 PPP1R15AO75807 674 aaPredicted RBP10.66□□□□□ -0.7
CAST-228ENST00000509903 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
CAST-228ENST00000509903 MIA2Q96PC5 1412 aa10.65□□□□□ -0.7
CAST-228ENST00000509903 ABCB7O75027 752 aa10.65□□□□□ -0.7
CAST-228ENST00000509903 ZNF692Q9BU19 519 aaPredicted RBP10.65□□□□□ -0.7
CAST-228ENST00000509903 RRP7BPQ9NSQ0 103 aa10.65□□□□□ -0.71
CAST-228ENST00000509903 DISP1Q96F81 1524 aa10.64□□□□□ -0.71
CAST-228ENST00000509903 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
CAST-228ENST00000509903 CHIC2Q9UKJ5 165 aa10.64□□□□□ -0.71
CAST-228ENST00000509903 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
CAST-228ENST00000509903 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
CAST-228ENST00000509903 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
CAST-228ENST00000509903 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
CAST-228ENST00000509903 CHMP7Q8WUX9 453 aaPredicted RBP10.62□□□□□ -0.71
CAST-228ENST00000509903 CDK11AQ9UQ88 783 aaPredicted RBP10.62□□□□□ -0.71
CAST-228ENST00000509903 RAPGEF6Q8TEU7 1601 aa10.62□□□□□ -0.71
CAST-228ENST00000509903 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
CAST-228ENST00000509903 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
CAST-228ENST00000509903 STK25O00506 426 aa10.6□□□□□ -0.71
CAST-228ENST00000509903 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
CAST-228ENST00000509903 SYNJ2O15056 1496 aa10.6□□□□□ -0.71
CAST-228ENST00000509903 CAPN15O75808 1086 aa10.59□□□□□ -0.71
CAST-228ENST00000509903 HIRIP3Q9BW71 556 aaPredicted RBP10.59□□□□□ -0.71
CAST-228ENST00000509903 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
CAST-228ENST00000509903 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
CAST-228ENST00000509903 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
CAST-228ENST00000509903 DAPK1P53355 1430 aa10.56□□□□□ -0.72
CAST-228ENST00000509903 CARMIL2Q6F5E8 1435 aa10.56□□□□□ -0.72
CAST-228ENST00000509903 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
CAST-228ENST00000509903 KDM6BO15054 1643 aa10.56□□□□□ -0.72
CAST-228ENST00000509903 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
CAST-228ENST00000509903 ROCK1Q13464 1354 aa10.55□□□□□ -0.72
CAST-228ENST00000509903 TROQ12816 1431 aaPredicted RBP10.55□□□□□ -0.72
CAST-228ENST00000509903 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
CAST-228ENST00000509903 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
CAST-228ENST00000509903 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
CAST-228ENST00000509903 ABCC5O15440 1437 aa10.54□□□□□ -0.72
CAST-228ENST00000509903 ANP32CO43423 234 aa10.53□□□□□ -0.72
CAST-228ENST00000509903 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
CAST-228ENST00000509903 KCNH8Q96L42 1107 aa10.53□□□□□ -0.72
CAST-228ENST00000509903 NUP160Q12769 1436 aa10.53□□□□□ -0.72
CAST-228ENST00000509903 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
CAST-228ENST00000509903 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms