RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
PTPN20-223ENST00000509900 STRCQ7RTU9 1775 aa17.31■□□□□ 0.36
PTPN20-223ENST00000509900 ABCA8O94911 1581 aa17.31■□□□□ 0.36
PTPN20-223ENST00000509900 ARHGEF40Q8TER5 1519 aa17.29■□□□□ 0.36
PTPN20-223ENST00000509900 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
PTPN20-223ENST00000509900 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
PTPN20-223ENST00000509900 POLA2Q14181 598 aa17.28■□□□□ 0.36
PTPN20-223ENST00000509900 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.36
PTPN20-223ENST00000509900 PREX1Q8TCU6 1659 aa17.25■□□□□ 0.35
PTPN20-223ENST00000509900 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
PTPN20-223ENST00000509900 NEO1Q92859 1461 aa17.24■□□□□ 0.35
PTPN20-223ENST00000509900 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
PTPN20-223ENST00000509900 POTEHQ6S545 545 aa17.22■□□□□ 0.35
PTPN20-223ENST00000509900 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
PTPN20-223ENST00000509900 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
PTPN20-223ENST00000509900 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
PTPN20-223ENST00000509900 CTTNBP2Q8WZ74 1663 aa17.17■□□□□ 0.34
PTPN20-223ENST00000509900 FANCAO15360 1455 aa17.17■□□□□ 0.34
PTPN20-223ENST00000509900 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
PTPN20-223ENST00000509900 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
PTPN20-223ENST00000509900 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
PTPN20-223ENST00000509900 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
PTPN20-223ENST00000509900 ATP10BO94823 1461 aa17.13■□□□□ 0.33
PTPN20-223ENST00000509900 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
PTPN20-223ENST00000509900 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
PTPN20-223ENST00000509900 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
PTPN20-223ENST00000509900 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
PTPN20-223ENST00000509900 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
PTPN20-223ENST00000509900 AKNAQ7Z591 1439 aa17.1■□□□□ 0.33
PTPN20-223ENST00000509900 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
PTPN20-223ENST00000509900 ZBTB22O15209 634 aa17.09■□□□□ 0.33
PTPN20-223ENST00000509900 PTPRTO14522 1441 aa17.09■□□□□ 0.33
PTPN20-223ENST00000509900 DENND4BO75064 1496 aaPredicted RBP17.09■□□□□ 0.33
PTPN20-223ENST00000509900 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
PTPN20-223ENST00000509900 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
PTPN20-223ENST00000509900 MLECQ14165 292 aa17.08■□□□□ 0.32
PTPN20-223ENST00000509900 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
PTPN20-223ENST00000509900 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
PTPN20-223ENST00000509900 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
PTPN20-223ENST00000509900 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
PTPN20-223ENST00000509900 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
PTPN20-223ENST00000509900 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
PTPN20-223ENST00000509900 HECW1Q76N89 1606 aa17■□□□□ 0.31
PTPN20-223ENST00000509900 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
PTPN20-223ENST00000509900 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
PTPN20-223ENST00000509900 C3P01024 1663 aa16.94■□□□□ 0.3
PTPN20-223ENST00000509900 UBAP1LF5GYI3 381 aa16.94■□□□□ 0.3
PTPN20-223ENST00000509900 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
PTPN20-223ENST00000509900 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
PTPN20-223ENST00000509900 ATP10AO60312 1499 aa16.91■□□□□ 0.3
PTPN20-223ENST00000509900 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
PTPN20-223ENST00000509900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN20-223ENST00000509900 P3H3Q8IVL6 736 aa16.88■□□□□ 0.29
PTPN20-223ENST00000509900 NUP153P49790 1475 aaKnown RBP16.86■□□□□ 0.29
PTPN20-223ENST00000509900 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
PTPN20-223ENST00000509900 HSPA1LP34931 641 aa16.85■□□□□ 0.29
PTPN20-223ENST00000509900 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
PTPN20-223ENST00000509900 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
PTPN20-223ENST00000509900 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
PTPN20-223ENST00000509900 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
PTPN20-223ENST00000509900 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
PTPN20-223ENST00000509900 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
PTPN20-223ENST00000509900 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
PTPN20-223ENST00000509900 PLEKHD1A6NEE1 506 aa16.76■□□□□ 0.27
PTPN20-223ENST00000509900 DIP2CQ9Y2E4 1556 aa16.76■□□□□ 0.27
PTPN20-223ENST00000509900 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
PTPN20-223ENST00000509900 PRXQ9BXM0 1461 aa16.75■□□□□ 0.27
PTPN20-223ENST00000509900 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
PTPN20-223ENST00000509900 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
PTPN20-223ENST00000509900 PLCH2O75038 1416 aa16.73■□□□□ 0.27
PTPN20-223ENST00000509900 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
PTPN20-223ENST00000509900 KDM5CP41229 1560 aa16.72■□□□□ 0.27
PTPN20-223ENST00000509900 ABCA6Q8N139 1617 aa16.71■□□□□ 0.27
PTPN20-223ENST00000509900 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.27
PTPN20-223ENST00000509900 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
PTPN20-223ENST00000509900 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-223ENST00000509900 AGLP35573 1532 aa16.7■□□□□ 0.26
PTPN20-223ENST00000509900 ZNF518AQ6AHZ1 1483 aa16.69■□□□□ 0.26
PTPN20-223ENST00000509900 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
PTPN20-223ENST00000509900 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
PTPN20-223ENST00000509900 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
PTPN20-223ENST00000509900 NPATQ14207 1427 aa16.67■□□□□ 0.26
PTPN20-223ENST00000509900 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
PTPN20-223ENST00000509900 MYO3AQ8NEV4 1616 aa16.66■□□□□ 0.26
PTPN20-223ENST00000509900 TOM1O60784 492 aa16.65■□□□□ 0.26
PTPN20-223ENST00000509900 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
PTPN20-223ENST00000509900 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
PTPN20-223ENST00000509900 PKD2Q13563 968 aa16.64■□□□□ 0.25
PTPN20-223ENST00000509900 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
PTPN20-223ENST00000509900 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
PTPN20-223ENST00000509900 CDK13Q14004 1512 aaKnown RBP16.62■□□□□ 0.25
PTPN20-223ENST00000509900 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
PTPN20-223ENST00000509900 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-223ENST00000509900 CPS1P31327 1500 aa16.61■□□□□ 0.25
PTPN20-223ENST00000509900 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
PTPN20-223ENST00000509900 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
PTPN20-223ENST00000509900 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.24
PTPN20-223ENST00000509900 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
PTPN20-223ENST00000509900 KIF14Q15058 1648 aa16.57■□□□□ 0.24
PTPN20-223ENST00000509900 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms