RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
MBD4-208ENST00000509828 RICTORQ6R327 1708 aa17.18■□□□□ 0.34
MBD4-208ENST00000509828 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
MBD4-208ENST00000509828 PLCH2O75038 1416 aa17.15■□□□□ 0.34
MBD4-208ENST00000509828 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
MBD4-208ENST00000509828 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
MBD4-208ENST00000509828 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
MBD4-208ENST00000509828 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
MBD4-208ENST00000509828 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
MBD4-208ENST00000509828 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
MBD4-208ENST00000509828 ATP10AO60312 1499 aa17.13■□□□□ 0.33
MBD4-208ENST00000509828 C9orf84Q5VXU9 1444 aa17.11■□□□□ 0.33
MBD4-208ENST00000509828 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
MBD4-208ENST00000509828 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
MBD4-208ENST00000509828 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.33
MBD4-208ENST00000509828 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
MBD4-208ENST00000509828 CLIP1P30622 1438 aa17.05■□□□□ 0.32
MBD4-208ENST00000509828 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
MBD4-208ENST00000509828 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
MBD4-208ENST00000509828 ARHGEF12Q9NZN5 1544 aa17.04■□□□□ 0.32
MBD4-208ENST00000509828 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
MBD4-208ENST00000509828 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
MBD4-208ENST00000509828 MYO5CQ9NQX4 1742 aa17.01■□□□□ 0.31
MBD4-208ENST00000509828 TROQ12816 1431 aaPredicted RBP17■□□□□ 0.31
MBD4-208ENST00000509828 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
MBD4-208ENST00000509828 KIF14Q15058 1648 aa16.99■□□□□ 0.31
MBD4-208ENST00000509828 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
MBD4-208ENST00000509828 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
MBD4-208ENST00000509828 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
MBD4-208ENST00000509828 SOCS7O14512 581 aa16.92■□□□□ 0.3
MBD4-208ENST00000509828 PTPRTO14522 1441 aa16.92■□□□□ 0.3
MBD4-208ENST00000509828 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
MBD4-208ENST00000509828 KDM5CP41229 1560 aa16.91■□□□□ 0.3
MBD4-208ENST00000509828 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
MBD4-208ENST00000509828 DIP2CQ9Y2E4 1556 aa16.9■□□□□ 0.3
MBD4-208ENST00000509828 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.3
MBD4-208ENST00000509828 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
MBD4-208ENST00000509828 STRCQ7RTU9 1775 aa16.88■□□□□ 0.29
MBD4-208ENST00000509828 SPAG9O60271 1321 aaKnown RBP16.87■□□□□ 0.29
MBD4-208ENST00000509828 AGLP35573 1532 aa16.86■□□□□ 0.29
MBD4-208ENST00000509828 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
MBD4-208ENST00000509828 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
MBD4-208ENST00000509828 HNRNPMP52272 730 aaKnown RBP eCLIP16.85■□□□□ 0.29
MBD4-208ENST00000509828 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
MBD4-208ENST00000509828 NCKAP5LQ9HCH0 1330 aa16.84■□□□□ 0.29
MBD4-208ENST00000509828 C3P01024 1663 aa16.84■□□□□ 0.29
MBD4-208ENST00000509828 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.28
MBD4-208ENST00000509828 ZMYM3Q14202 1370 aa16.83■□□□□ 0.28
MBD4-208ENST00000509828 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
MBD4-208ENST00000509828 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
MBD4-208ENST00000509828 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
MBD4-208ENST00000509828 ABCC1P33527 1531 aa16.82■□□□□ 0.28
MBD4-208ENST00000509828 GGT6Q6P531 493 aa16.82■□□□□ 0.28
MBD4-208ENST00000509828 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
MBD4-208ENST00000509828 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
MBD4-208ENST00000509828 PREX2Q70Z35 1606 aa16.8■□□□□ 0.28
MBD4-208ENST00000509828 SPATA31D1Q6ZQQ2 1576 aa16.79■□□□□ 0.28
MBD4-208ENST00000509828 NPATQ14207 1427 aa16.79■□□□□ 0.28
MBD4-208ENST00000509828 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
MBD4-208ENST00000509828 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
MBD4-208ENST00000509828 PKD2Q13563 968 aa16.78■□□□□ 0.28
MBD4-208ENST00000509828 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.28
MBD4-208ENST00000509828 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
MBD4-208ENST00000509828 LTBP4Q8N2S1 1624 aa16.77■□□□□ 0.27
MBD4-208ENST00000509828 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
MBD4-208ENST00000509828 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
MBD4-208ENST00000509828 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
MBD4-208ENST00000509828 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
MBD4-208ENST00000509828 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
MBD4-208ENST00000509828 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
MBD4-208ENST00000509828 SYCP2Q9BX26 1530 aa16.73■□□□□ 0.27
MBD4-208ENST00000509828 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
MBD4-208ENST00000509828 GPATCH8Q9UKJ3 1502 aaKnown RBP16.72■□□□□ 0.27
MBD4-208ENST00000509828 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
MBD4-208ENST00000509828 A2MP01023 1474 aa16.72■□□□□ 0.27
MBD4-208ENST00000509828 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
MBD4-208ENST00000509828 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
MBD4-208ENST00000509828 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
MBD4-208ENST00000509828 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
MBD4-208ENST00000509828 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
MBD4-208ENST00000509828 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
MBD4-208ENST00000509828 PIP4K2BP78356 416 aa16.69■□□□□ 0.26
MBD4-208ENST00000509828 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
MBD4-208ENST00000509828 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
MBD4-208ENST00000509828 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
MBD4-208ENST00000509828 TOM1O60784 492 aa16.66■□□□□ 0.26
MBD4-208ENST00000509828 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
MBD4-208ENST00000509828 KIF3BO15066 747 aa16.64■□□□□ 0.25
MBD4-208ENST00000509828 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
MBD4-208ENST00000509828 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
MBD4-208ENST00000509828 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
MBD4-208ENST00000509828 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
MBD4-208ENST00000509828 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
MBD4-208ENST00000509828 HSPA1LP34931 641 aa16.61■□□□□ 0.25
MBD4-208ENST00000509828 FBXO31Q5XUX0 539 aaPredicted RBP16.61■□□□□ 0.25
MBD4-208ENST00000509828 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
MBD4-208ENST00000509828 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
MBD4-208ENST00000509828 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
MBD4-208ENST00000509828 TNRQ92752 1358 aa16.6■□□□□ 0.25
MBD4-208ENST00000509828 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms