RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 POGZQ7Z3K3 1410 aa8.66□□□□□ -1.02
HTT-206ENST00000509618 ZNF335Q9H4Z2 1342 aaPredicted RBP8.66□□□□□ -1.02
HTT-206ENST00000509618 NCOA1Q15788 1441 aa8.65□□□□□ -1.02
HTT-206ENST00000509618 UHRF1BP1Q6BDS2 1440 aa8.65□□□□□ -1.02
HTT-206ENST00000509618 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
HTT-206ENST00000509618 SENP3Q9H4L4 574 aaPredicted RBP8.64□□□□□ -1.03
HTT-206ENST00000509618 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
HTT-206ENST00000509618 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
HTT-206ENST00000509618 SAMD9Q5K651 1589 aa8.62□□□□□ -1.03
HTT-206ENST00000509618 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
HTT-206ENST00000509618 HSPA1LP34931 641 aa8.62□□□□□ -1.03
HTT-206ENST00000509618 ATP10AO60312 1499 aa8.62□□□□□ -1.03
HTT-206ENST00000509618 PRXQ9BXM0 1461 aa8.62□□□□□ -1.03
HTT-206ENST00000509618 C3P01024 1663 aa8.62□□□□□ -1.03
HTT-206ENST00000509618 MAGI2Q86UL8 1455 aa8.61□□□□□ -1.03
HTT-206ENST00000509618 SCAPERQ9BY12 1400 aa8.61□□□□□ -1.03
HTT-206ENST00000509618 NCKAP5LQ9HCH0 1330 aa8.6□□□□□ -1.03
HTT-206ENST00000509618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
HTT-206ENST00000509618 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
HTT-206ENST00000509618 DMRT2Q9Y5R5 561 aa8.6□□□□□ -1.03
HTT-206ENST00000509618 ALKQ9UM73 1620 aa8.6□□□□□ -1.03
HTT-206ENST00000509618 CDK13Q14004 1512 aaKnown RBP8.59□□□□□ -1.03
HTT-206ENST00000509618 CAMSAP1Q5T5Y3 1602 aa8.59□□□□□ -1.03
HTT-206ENST00000509618 CFAP74Q9C0B2 1584 aa8.59□□□□□ -1.03
HTT-206ENST00000509618 DIP2CQ9Y2E4 1556 aa8.59□□□□□ -1.03
HTT-206ENST00000509618 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
HTT-206ENST00000509618 PIP4K2BP78356 416 aa8.56□□□□□ -1.04
HTT-206ENST00000509618 RGS17Q9UGC6 210 aaPredicted RBP8.55□□□□□ -1.04
HTT-206ENST00000509618 KDM5CP41229 1560 aa8.55□□□□□ -1.04
HTT-206ENST00000509618 PLCH2O75038 1416 aa8.54□□□□□ -1.04
HTT-206ENST00000509618 TRAPPC8Q9Y2L5 1435 aa8.54□□□□□ -1.04
HTT-206ENST00000509618 RANGAP1P46060 587 aaPredicted RBP8.54□□□□□ -1.04
HTT-206ENST00000509618 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
HTT-206ENST00000509618 KIF14Q15058 1648 aa8.54□□□□□ -1.04
HTT-206ENST00000509618 SCAF1Q9H7N4 1312 aaKnown RBP8.54□□□□□ -1.04
HTT-206ENST00000509618 TCOF1Q13428 1488 aaKnown RBP8.52□□□□□ -1.05
HTT-206ENST00000509618 PLEKHD1A6NEE1 506 aa8.51□□□□□ -1.05
HTT-206ENST00000509618 REREQ9P2R6 1566 aa8.51□□□□□ -1.05
HTT-206ENST00000509618 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
HTT-206ENST00000509618 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
HTT-206ENST00000509618 ZNF518AQ6AHZ1 1483 aa8.5□□□□□ -1.05
HTT-206ENST00000509618 AGLP35573 1532 aa8.49□□□□□ -1.05
HTT-206ENST00000509618 NEURL4Q96JN8 1562 aa8.49□□□□□ -1.05
HTT-206ENST00000509618 ZNF142P52746 1687 aaPredicted RBP8.49□□□□□ -1.05
HTT-206ENST00000509618 CEP170BQ9Y4F5 1589 aaPredicted RBP8.48□□□□□ -1.05
HTT-206ENST00000509618 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
HTT-206ENST00000509618 SETD1AO15047 1707 aaKnown RBP8.48□□□□□ -1.05
HTT-206ENST00000509618 NPATQ14207 1427 aa8.47□□□□□ -1.05
HTT-206ENST00000509618 PTPRKQ15262 1439 aa8.46□□□□□ -1.05
HTT-206ENST00000509618 MYO5CQ9NQX4 1742 aa8.46□□□□□ -1.05
HTT-206ENST00000509618 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
HTT-206ENST00000509618 KIDINS220Q9ULH0 1771 aa8.46□□□□□ -1.05
HTT-206ENST00000509618 ARHGAP5Q13017 1502 aa8.46□□□□□ -1.05
HTT-206ENST00000509618 VWDEQ8N2E2 1590 aa8.46□□□□□ -1.06
HTT-206ENST00000509618 ABCC1P33527 1531 aa8.45□□□□□ -1.06
HTT-206ENST00000509618 POTEAQ6S8J7 498 aa8.45□□□□□ -1.06
HTT-206ENST00000509618 PPP6R1Q9UPN7 881 aa8.45□□□□□ -1.06
HTT-206ENST00000509618 ZMYM3Q14202 1370 aa8.45□□□□□ -1.06
HTT-206ENST00000509618 EFCAB2Q5VUJ9 269 aa8.44□□□□□ -1.06
HTT-206ENST00000509618 SHANK2Q9UPX8 1470 aa8.44□□□□□ -1.06
HTT-206ENST00000509618 MROH2AA6NES4 1674 aa8.43□□□□□ -1.06
HTT-206ENST00000509618 CLTCQ00610 1675 aaKnown RBP8.43□□□□□ -1.06
HTT-206ENST00000509618 MYT1LQ9UL68 1186 aa8.43□□□□□ -1.06
HTT-206ENST00000509618 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
HTT-206ENST00000509618 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
HTT-206ENST00000509618 STRCP1A6NGW2 1772 aa8.43□□□□□ -1.06
HTT-206ENST00000509618 PKD2Q13563 968 aa8.42□□□□□ -1.06
HTT-206ENST00000509618 CPS1P31327 1500 aa8.42□□□□□ -1.06
HTT-206ENST00000509618 DNMT1P26358 1616 aaKnown RBP8.42□□□□□ -1.06
HTT-206ENST00000509618 CDC42BPBQ9Y5S2 1711 aa8.42□□□□□ -1.06
HTT-206ENST00000509618 LRRIQ1Q96JM4 1722 aa8.41□□□□□ -1.06
HTT-206ENST00000509618 SAMD9LQ8IVG5 1584 aa8.4□□□□□ -1.06
HTT-206ENST00000509618 TOM1O60784 492 aa8.4□□□□□ -1.06
HTT-206ENST00000509618 SUPT6HQ7KZ85 1726 aaKnown RBP8.4□□□□□ -1.07
HTT-206ENST00000509618 PLXNC1O60486 1568 aa8.39□□□□□ -1.07
HTT-206ENST00000509618 A2ML1A8K2U0 1454 aa8.39□□□□□ -1.07
HTT-206ENST00000509618 TROQ12816 1431 aaPredicted RBP8.39□□□□□ -1.07
HTT-206ENST00000509618 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
HTT-206ENST00000509618 PREX2Q70Z35 1606 aa8.39□□□□□ -1.07
HTT-206ENST00000509618 LRRC7Q96NW7 1537 aa8.39□□□□□ -1.07
HTT-206ENST00000509618 POLR1AO95602 1720 aaPredicted RBP8.38□□□□□ -1.07
HTT-206ENST00000509618 SRCAPQ6ZRS2 3230 aa8.37□□□□□ -1.07
HTT-206ENST00000509618 FBXO31Q5XUX0 539 aaPredicted RBP8.37□□□□□ -1.07
HTT-206ENST00000509618 SYCP2Q9BX26 1530 aa8.37□□□□□ -1.07
HTT-206ENST00000509618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.36□□□□□ -1.07
HTT-206ENST00000509618 FAM9AQ8IZU1 332 aaPredicted RBP8.36□□□□□ -1.07
HTT-206ENST00000509618 CSRNP3Q8WYN3 585 aa8.36□□□□□ -1.07
HTT-206ENST00000509618 ATP1B4Q9UN42 357 aaPredicted RBP8.36□□□□□ -1.07
HTT-206ENST00000509618 RNF17Q9BXT8 1623 aaKnown RBP8.36□□□□□ -1.07
HTT-206ENST00000509618 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
HTT-206ENST00000509618 ARHGAP35Q9NRY4 1499 aa8.34□□□□□ -1.07
HTT-206ENST00000509618 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
HTT-206ENST00000509618 ATP7AQ04656 1500 aa8.34□□□□□ -1.08
HTT-206ENST00000509618 A2MP01023 1474 aa8.33□□□□□ -1.08
HTT-206ENST00000509618 GGT6Q6P531 493 aa8.33□□□□□ -1.08
HTT-206ENST00000509618 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
HTT-206ENST00000509618 CDC42BPAQ5VT25 1732 aa8.32□□□□□ -1.08
HTT-206ENST00000509618 TNRQ92752 1358 aa8.32□□□□□ -1.08
HTT-206ENST00000509618 MED14O60244 1454 aa8.32□□□□□ -1.08
HTT-206ENST00000509618 XIRP1Q702N8 1843 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms