RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 YEATS2Q9ULM3 1422 aa6.8□□□□□ -1.32
RNF4-211ENST00000509206 MADDQ8WXG6 1647 aa6.79□□□□□ -1.32
RNF4-211ENST00000509206 ZNF219Q9P2Y4 722 aaPredicted RBP6.79□□□□□ -1.32
RNF4-211ENST00000509206 CFAP43Q8NDM7 1665 aa6.78□□□□□ -1.32
RNF4-211ENST00000509206 RIMS1Q86UR5 1692 aaKnown RBP6.77□□□□□ -1.32
RNF4-211ENST00000509206 BCORL1Q5H9F3 1711 aa6.77□□□□□ -1.33
RNF4-211ENST00000509206 IQGAP2Q13576 1575 aa6.77□□□□□ -1.33
RNF4-211ENST00000509206 CEBPAP49715 358 aaPredicted RBP6.76□□□□□ -1.33
RNF4-211ENST00000509206 DISP1Q96F81 1524 aa6.76□□□□□ -1.33
RNF4-211ENST00000509206 ESF1Q9H501 851 aaKnown RBP6.75□□□□□ -1.33
RNF4-211ENST00000509206 AKNAQ7Z591 1439 aa6.75□□□□□ -1.33
RNF4-211ENST00000509206 FANCAO15360 1455 aa6.74□□□□□ -1.33
RNF4-211ENST00000509206 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
RNF4-211ENST00000509206 MYT1LQ9UL68 1186 aa6.73□□□□□ -1.33
RNF4-211ENST00000509206 UHRF1BP1Q6BDS2 1440 aa6.73□□□□□ -1.33
RNF4-211ENST00000509206 NEO1Q92859 1461 aa6.73□□□□□ -1.33
RNF4-211ENST00000509206 PTPRTO14522 1441 aa6.72□□□□□ -1.33
RNF4-211ENST00000509206 DENND4BO75064 1496 aaPredicted RBP6.72□□□□□ -1.33
RNF4-211ENST00000509206 HSPA1LP34931 641 aa6.71□□□□□ -1.34
RNF4-211ENST00000509206 IQSEC2Q5JU85 1478 aa6.71□□□□□ -1.34
RNF4-211ENST00000509206 TOM1O60784 492 aa6.7□□□□□ -1.34
RNF4-211ENST00000509206 DSG3P32926 999 aa6.7□□□□□ -1.34
RNF4-211ENST00000509206 P3H3Q8IVL6 736 aa6.7□□□□□ -1.34
RNF4-211ENST00000509206 GOLGA3Q08378 1498 aa6.7□□□□□ -1.34
RNF4-211ENST00000509206 UGGT2Q9NYU1 1516 aa6.7□□□□□ -1.34
RNF4-211ENST00000509206 KIAA0556O60303 1618 aa6.69□□□□□ -1.34
RNF4-211ENST00000509206 PLEKHD1A6NEE1 506 aa6.69□□□□□ -1.34
RNF4-211ENST00000509206 ABCB7O75027 752 aa6.69□□□□□ -1.34
RNF4-211ENST00000509206 ATF5Q9Y2D1 282 aaPredicted RBP6.68□□□□□ -1.34
RNF4-211ENST00000509206 RAPGEF2Q9Y4G8 1499 aa6.67□□□□□ -1.34
RNF4-211ENST00000509206 ZNF335Q9H4Z2 1342 aaPredicted RBP6.67□□□□□ -1.34
RNF4-211ENST00000509206 PREX1Q8TCU6 1659 aa6.67□□□□□ -1.34
RNF4-211ENST00000509206 ZFYVE16Q7Z3T8 1539 aa6.66□□□□□ -1.34
RNF4-211ENST00000509206 ARHGEF40Q8TER5 1519 aa6.66□□□□□ -1.34
RNF4-211ENST00000509206 NCKAP5LQ9HCH0 1330 aa6.66□□□□□ -1.34
RNF4-211ENST00000509206 FHOD3Q2V2M9 1422 aa6.66□□□□□ -1.34
RNF4-211ENST00000509206 ATP10BO94823 1461 aa6.66□□□□□ -1.34
RNF4-211ENST00000509206 ABCA8O94911 1581 aa6.65□□□□□ -1.34
RNF4-211ENST00000509206 MED1Q15648 1581 aaPredicted RBP6.65□□□□□ -1.34
RNF4-211ENST00000509206 LTBP4Q8N2S1 1624 aa6.65□□□□□ -1.34
RNF4-211ENST00000509206 STRCQ7RTU9 1775 aa6.65□□□□□ -1.34
RNF4-211ENST00000509206 SETD1BQ9UPS6 1966 aaKnown RBP6.65□□□□□ -1.34
RNF4-211ENST00000509206 EFCAB5A4FU69 1503 aa6.65□□□□□ -1.35
RNF4-211ENST00000509206 ABCA9Q8IUA7 1624 aa6.65□□□□□ -1.35
RNF4-211ENST00000509206 FER1L4A9Z1Z3 1794 aa6.64□□□□□ -1.35
RNF4-211ENST00000509206 FKBP8Q14318 412 aa6.64□□□□□ -1.35
RNF4-211ENST00000509206 MAGI2Q86UL8 1455 aa6.64□□□□□ -1.35
RNF4-211ENST00000509206 TTC37Q6PGP7 1564 aa6.64□□□□□ -1.35
RNF4-211ENST00000509206 ATP10AO60312 1499 aa6.63□□□□□ -1.35
RNF4-211ENST00000509206 PKD2Q13563 968 aa6.63□□□□□ -1.35
RNF4-211ENST00000509206 POLA2Q14181 598 aa6.63□□□□□ -1.35
RNF4-211ENST00000509206 FRMPD1Q5SYB0 1578 aa6.63□□□□□ -1.35
RNF4-211ENST00000509206 C9orf84Q5VXU9 1444 aa6.62□□□□□ -1.35
RNF4-211ENST00000509206 SCAPERQ9BY12 1400 aa6.62□□□□□ -1.35
RNF4-211ENST00000509206 TRAPPC8Q9Y2L5 1435 aa6.62□□□□□ -1.35
RNF4-211ENST00000509206 NCOA1Q15788 1441 aa6.61□□□□□ -1.35
RNF4-211ENST00000509206 RANGAP1P46060 587 aaPredicted RBP6.61□□□□□ -1.35
RNF4-211ENST00000509206 EFCAB2Q5VUJ9 269 aa6.61□□□□□ -1.35
RNF4-211ENST00000509206 ARHGEF12Q9NZN5 1544 aa6.6□□□□□ -1.35
RNF4-211ENST00000509206 HECW1Q76N89 1606 aa6.58□□□□□ -1.36
RNF4-211ENST00000509206 CFAP74Q9C0B2 1584 aa6.58□□□□□ -1.36
RNF4-211ENST00000509206 ZMYM4Q5VZL5 1548 aa6.58□□□□□ -1.36
RNF4-211ENST00000509206 RICTORQ6R327 1708 aa6.58□□□□□ -1.36
RNF4-211ENST00000509206 CAMSAP1Q5T5Y3 1602 aa6.58□□□□□ -1.36
RNF4-211ENST00000509206 AFAP1Q8N556 730 aa6.57□□□□□ -1.36
RNF4-211ENST00000509206 ATP1B4Q9UN42 357 aaPredicted RBP6.57□□□□□ -1.36
RNF4-211ENST00000509206 PTPRKQ15262 1439 aa6.57□□□□□ -1.36
RNF4-211ENST00000509206 RGS17Q9UGC6 210 aaPredicted RBP6.56□□□□□ -1.36
RNF4-211ENST00000509206 ZBTB12Q9Y330 459 aaPredicted RBP6.56□□□□□ -1.36
RNF4-211ENST00000509206 POTEAQ6S8J7 498 aa6.55□□□□□ -1.36
RNF4-211ENST00000509206 CNTLNQ9NXG0 1405 aa6.55□□□□□ -1.36
RNF4-211ENST00000509206 SIGLEC1Q9BZZ2 1709 aa6.55□□□□□ -1.36
RNF4-211ENST00000509206 AMER1Q5JTC6 1135 aaPredicted RBP6.54□□□□□ -1.36
RNF4-211ENST00000509206 ZMYM3Q14202 1370 aa6.54□□□□□ -1.36
RNF4-211ENST00000509206 PLCH2O75038 1416 aa6.53□□□□□ -1.36
RNF4-211ENST00000509206 CTTNBP2Q8WZ74 1663 aa6.53□□□□□ -1.36
RNF4-211ENST00000509206 CDK11AQ9UQ88 783 aaPredicted RBP6.53□□□□□ -1.36
RNF4-211ENST00000509206 RAPGEF6Q8TEU7 1601 aa6.53□□□□□ -1.36
RNF4-211ENST00000509206 NPATQ14207 1427 aa6.52□□□□□ -1.37
RNF4-211ENST00000509206 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.52□□□□□ -1.37
RNF4-211ENST00000509206 ANKLE2Q86XL3 938 aa6.52□□□□□ -1.37
RNF4-211ENST00000509206 RTN4Q9NQC3 1192 aaKnown RBP6.52□□□□□ -1.37
RNF4-211ENST00000509206 C3P01024 1663 aa6.52□□□□□ -1.37
RNF4-211ENST00000509206 CPS1P31327 1500 aa6.51□□□□□ -1.37
RNF4-211ENST00000509206 GGT6Q6P531 493 aa6.51□□□□□ -1.37
RNF4-211ENST00000509206 NUP153P49790 1475 aaKnown RBP6.51□□□□□ -1.37
RNF4-211ENST00000509206 PLA2R1Q13018 1463 aa6.51□□□□□ -1.37
RNF4-211ENST00000509206 ZNF518AQ6AHZ1 1483 aa6.51□□□□□ -1.37
RNF4-211ENST00000509206 SHANK2Q9UPX8 1470 aa6.51□□□□□ -1.37
RNF4-211ENST00000509206 UPF1Q92900 1129 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNF4-211ENST00000509206 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
RNF4-211ENST00000509206 TCOF1Q13428 1488 aaKnown RBP6.48□□□□□ -1.37
RNF4-211ENST00000509206 THEMISQ8N1K5 641 aaPredicted RBP6.48□□□□□ -1.37
RNF4-211ENST00000509206 AGLP35573 1532 aa6.48□□□□□ -1.37
RNF4-211ENST00000509206 ARHGAP5Q13017 1502 aa6.47□□□□□ -1.37
RNF4-211ENST00000509206 MEX3CQ5U5Q3 659 aaKnown RBP6.47□□□□□ -1.37
RNF4-211ENST00000509206 ZNF777Q9ULD5 760 aaPredicted RBP6.47□□□□□ -1.37
RNF4-211ENST00000509206 MLH3Q9UHC1 1453 aa6.46□□□□□ -1.38
RNF4-211ENST00000509206 SUPT6HQ7KZ85 1726 aaKnown RBP6.45□□□□□ -1.38
RNF4-211ENST00000509206 DIP2CQ9Y2E4 1556 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms