RNA–Protein interactions for RNA: ENST00000509083.2

TMEM199-204, Transcript of transmembrane protein 199, humanhuman

TSL 2

Gene TMEM199, Length 635 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-204ENST00000509083 ARHGEF12Q9NZN5 1544 aa21.22■□□□□ 0.99
TMEM199-204ENST00000509083 HECW1Q76N89 1606 aa21.22■□□□□ 0.99
TMEM199-204ENST00000509083 PTPRTO14522 1441 aa21.21■□□□□ 0.99
TMEM199-204ENST00000509083 IQSEC2Q5JU85 1478 aa21.2■□□□□ 0.98
TMEM199-204ENST00000509083 SETD1BQ9UPS6 1966 aaKnown RBP21.2■□□□□ 0.98
TMEM199-204ENST00000509083 CEBPAP49715 358 aaPredicted RBP21.2■□□□□ 0.98
TMEM199-204ENST00000509083 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
TMEM199-204ENST00000509083 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
TMEM199-204ENST00000509083 NUP153P49790 1475 aaKnown RBP21.18■□□□□ 0.98
TMEM199-204ENST00000509083 SAMD9Q5K651 1589 aa21.18■□□□□ 0.98
TMEM199-204ENST00000509083 ATP10AO60312 1499 aa21.17■□□□□ 0.98
TMEM199-204ENST00000509083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM199-204ENST00000509083 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
TMEM199-204ENST00000509083 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
TMEM199-204ENST00000509083 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
TMEM199-204ENST00000509083 MYT1LQ9UL68 1186 aa21.07■□□□□ 0.96
TMEM199-204ENST00000509083 UBAP1LF5GYI3 381 aa21.05■□□□□ 0.96
TMEM199-204ENST00000509083 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
TMEM199-204ENST00000509083 PLCH2O75038 1416 aa21.03■□□□□ 0.96
TMEM199-204ENST00000509083 C3P01024 1663 aa21.02■□□□□ 0.95
TMEM199-204ENST00000509083 NCOA1Q15788 1441 aa21.01■□□□□ 0.95
TMEM199-204ENST00000509083 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
TMEM199-204ENST00000509083 ZNF518AQ6AHZ1 1483 aa21■□□□□ 0.95
TMEM199-204ENST00000509083 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
TMEM199-204ENST00000509083 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
TMEM199-204ENST00000509083 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
TMEM199-204ENST00000509083 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
TMEM199-204ENST00000509083 MED1Q15648 1581 aaPredicted RBP20.92■□□□□ 0.94
TMEM199-204ENST00000509083 REREQ9P2R6 1566 aa20.92■□□□□ 0.94
TMEM199-204ENST00000509083 DIP2CQ9Y2E4 1556 aa20.92■□□□□ 0.94
TMEM199-204ENST00000509083 KDM5CP41229 1560 aa20.91■□□□□ 0.94
TMEM199-204ENST00000509083 CDK13Q14004 1512 aaKnown RBP20.91■□□□□ 0.94
TMEM199-204ENST00000509083 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
TMEM199-204ENST00000509083 CNTLNQ9NXG0 1405 aa20.91■□□□□ 0.94
TMEM199-204ENST00000509083 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
TMEM199-204ENST00000509083 AGLP35573 1532 aa20.88■□□□□ 0.93
TMEM199-204ENST00000509083 ARHGAP5Q13017 1502 aa20.88■□□□□ 0.93
TMEM199-204ENST00000509083 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
TMEM199-204ENST00000509083 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
TMEM199-204ENST00000509083 NCKAP5LQ9HCH0 1330 aa20.86■□□□□ 0.93
TMEM199-204ENST00000509083 CDK11AQ9UQ88 783 aaPredicted RBP20.86■□□□□ 0.93
TMEM199-204ENST00000509083 ABCA6Q8N139 1617 aa20.86■□□□□ 0.93
TMEM199-204ENST00000509083 PKD2Q13563 968 aa20.84■□□□□ 0.93
TMEM199-204ENST00000509083 ATP1B4Q9UN42 357 aaPredicted RBP20.84■□□□□ 0.93
TMEM199-204ENST00000509083 SUPT6HQ7KZ85 1726 aaKnown RBP20.84■□□□□ 0.93
TMEM199-204ENST00000509083 KIF14Q15058 1648 aa20.83■□□□□ 0.93
TMEM199-204ENST00000509083 NPATQ14207 1427 aa20.83■□□□□ 0.93
TMEM199-204ENST00000509083 HSPA1LP34931 641 aa20.82■□□□□ 0.92
TMEM199-204ENST00000509083 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
TMEM199-204ENST00000509083 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
TMEM199-204ENST00000509083 TOM1O60784 492 aa20.8■□□□□ 0.92
TMEM199-204ENST00000509083 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
TMEM199-204ENST00000509083 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
TMEM199-204ENST00000509083 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
TMEM199-204ENST00000509083 CLIP1P30622 1438 aa20.78■□□□□ 0.92
TMEM199-204ENST00000509083 ZNF142P52746 1687 aaPredicted RBP20.75■□□□□ 0.91
TMEM199-204ENST00000509083 ZMYM3Q14202 1370 aa20.73■□□□□ 0.91
TMEM199-204ENST00000509083 MYO3AQ8NEV4 1616 aa20.73■□□□□ 0.91
TMEM199-204ENST00000509083 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
TMEM199-204ENST00000509083 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
TMEM199-204ENST00000509083 TCOF1Q13428 1488 aaKnown RBP20.71■□□□□ 0.91
TMEM199-204ENST00000509083 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
TMEM199-204ENST00000509083 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
TMEM199-204ENST00000509083 CPS1P31327 1500 aa20.69■□□□□ 0.9
TMEM199-204ENST00000509083 ABCC1P33527 1531 aa20.69■□□□□ 0.9
TMEM199-204ENST00000509083 CDC42BPBQ9Y5S2 1711 aa20.69■□□□□ 0.9
TMEM199-204ENST00000509083 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
TMEM199-204ENST00000509083 EEA1Q15075 1411 aa20.68■□□□□ 0.9
TMEM199-204ENST00000509083 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
TMEM199-204ENST00000509083 PREX2Q70Z35 1606 aa20.65■□□□□ 0.9
TMEM199-204ENST00000509083 PTPRKQ15262 1439 aa20.64■□□□□ 0.89
TMEM199-204ENST00000509083 SHANK2Q9UPX8 1470 aa20.6■□□□□ 0.89
TMEM199-204ENST00000509083 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
TMEM199-204ENST00000509083 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
TMEM199-204ENST00000509083 A2ML1A8K2U0 1454 aa20.57■□□□□ 0.88
TMEM199-204ENST00000509083 SAMD9LQ8IVG5 1584 aa20.57■□□□□ 0.88
TMEM199-204ENST00000509083 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
TMEM199-204ENST00000509083 GGT6Q6P531 493 aa20.56■□□□□ 0.88
TMEM199-204ENST00000509083 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
TMEM199-204ENST00000509083 ZNF777Q9ULD5 760 aaPredicted RBP20.54■□□□□ 0.88
TMEM199-204ENST00000509083 A2MP01023 1474 aa20.51■□□□□ 0.87
TMEM199-204ENST00000509083 CDC42BPAQ5VT25 1732 aa20.51■□□□□ 0.87
TMEM199-204ENST00000509083 ATP7AQ04656 1500 aa20.51■□□□□ 0.87
TMEM199-204ENST00000509083 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
TMEM199-204ENST00000509083 SYCP2Q9BX26 1530 aa20.49■□□□□ 0.87
TMEM199-204ENST00000509083 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
TMEM199-204ENST00000509083 PLXNC1O60486 1568 aa20.49■□□□□ 0.87
TMEM199-204ENST00000509083 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
TMEM199-204ENST00000509083 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
TMEM199-204ENST00000509083 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
TMEM199-204ENST00000509083 CCDC18Q5T9S5 1454 aa20.46■□□□□ 0.87
TMEM199-204ENST00000509083 VWDEQ8N2E2 1590 aa20.45■□□□□ 0.86
TMEM199-204ENST00000509083 TNRQ92752 1358 aa20.45■□□□□ 0.86
TMEM199-204ENST00000509083 HNRNPMP52272 730 aaKnown RBP eCLIP20.44■□□□□ 0.86
TMEM199-204ENST00000509083 INO80Q9ULG1 1556 aaPredicted RBP20.43■□□□□ 0.86
TMEM199-204ENST00000509083 RNF17Q9BXT8 1623 aaKnown RBP20.43■□□□□ 0.86
TMEM199-204ENST00000509083 ALKQ9UM73 1620 aa20.43■□□□□ 0.86
TMEM199-204ENST00000509083 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
TMEM199-204ENST00000509083 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
TMEM199-204ENST00000509083 PLEKHH2Q8IVE3 1493 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms