RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
HTT-205ENST00000509043 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
HTT-205ENST00000509043 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
HTT-205ENST00000509043 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
HTT-205ENST00000509043 ARID3CA6NKF2 412 aa13.35□□□□□ -0.27
HTT-205ENST00000509043 UHRF1BP1LA0JNW5 1464 aa13.35□□□□□ -0.27
HTT-205ENST00000509043 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
HTT-205ENST00000509043 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
HTT-205ENST00000509043 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
HTT-205ENST00000509043 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
HTT-205ENST00000509043 ARHGEF5Q12774 1597 aa13.31□□□□□ -0.28
HTT-205ENST00000509043 ANKRD30AQ9BXX3 1397 aa13.31□□□□□ -0.28
HTT-205ENST00000509043 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
HTT-205ENST00000509043 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
HTT-205ENST00000509043 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
HTT-205ENST00000509043 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
HTT-205ENST00000509043 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
HTT-205ENST00000509043 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
HTT-205ENST00000509043 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
HTT-205ENST00000509043 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
HTT-205ENST00000509043 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
HTT-205ENST00000509043 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
HTT-205ENST00000509043 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
HTT-205ENST00000509043 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
HTT-205ENST00000509043 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
HTT-205ENST00000509043 KDM6BO15054 1643 aa13.24□□□□□ -0.29
HTT-205ENST00000509043 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
HTT-205ENST00000509043 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
HTT-205ENST00000509043 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
HTT-205ENST00000509043 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
HTT-205ENST00000509043 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
HTT-205ENST00000509043 KIAA1107Q9UPP5 1409 aa13.22□□□□□ -0.29
HTT-205ENST00000509043 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
HTT-205ENST00000509043 MBD5Q9P267 1494 aa13.22□□□□□ -0.29
HTT-205ENST00000509043 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
HTT-205ENST00000509043 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
HTT-205ENST00000509043 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
HTT-205ENST00000509043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.29
HTT-205ENST00000509043 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
HTT-205ENST00000509043 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
HTT-205ENST00000509043 KDM5DQ9BY66 1539 aa13.2□□□□□ -0.3
HTT-205ENST00000509043 CDC42BPBQ9Y5S2 1711 aa13.2□□□□□ -0.3
HTT-205ENST00000509043 ZCCHC11Q5TAX3 1644 aaKnown RBP13.2□□□□□ -0.3
HTT-205ENST00000509043 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
HTT-205ENST00000509043 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
HTT-205ENST00000509043 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
HTT-205ENST00000509043 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
HTT-205ENST00000509043 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
HTT-205ENST00000509043 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
HTT-205ENST00000509043 PZPP20742 1482 aa13.17□□□□□ -0.3
HTT-205ENST00000509043 PLCH2O75038 1416 aa13.17□□□□□ -0.3
HTT-205ENST00000509043 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
HTT-205ENST00000509043 MIER1Q8N108 512 aa13.15□□□□□ -0.3
HTT-205ENST00000509043 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
HTT-205ENST00000509043 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
HTT-205ENST00000509043 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
HTT-205ENST00000509043 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
HTT-205ENST00000509043 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
HTT-205ENST00000509043 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
HTT-205ENST00000509043 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
HTT-205ENST00000509043 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
HTT-205ENST00000509043 ABCC1P33527 1531 aa13.09□□□□□ -0.31
HTT-205ENST00000509043 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
HTT-205ENST00000509043 NUP155O75694 1391 aa13.08□□□□□ -0.31
HTT-205ENST00000509043 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
HTT-205ENST00000509043 ERBINQ96RT1 1412 aa13.08□□□□□ -0.32
HTT-205ENST00000509043 UNC13BO14795 1591 aa13.07□□□□□ -0.32
HTT-205ENST00000509043 ABCA9Q8IUA7 1624 aa13.07□□□□□ -0.32
HTT-205ENST00000509043 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
HTT-205ENST00000509043 PKD2Q13563 968 aa13.06□□□□□ -0.32
HTT-205ENST00000509043 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
HTT-205ENST00000509043 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
HTT-205ENST00000509043 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
HTT-205ENST00000509043 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.321e-7■■■■■ 32.2
HTT-205ENST00000509043 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
HTT-205ENST00000509043 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
HTT-205ENST00000509043 FOXD1Q16676 465 aa13.02□□□□□ -0.33
HTT-205ENST00000509043 ASXL2Q76L83 1435 aa13.02□□□□□ -0.33
HTT-205ENST00000509043 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.33
HTT-205ENST00000509043 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
HTT-205ENST00000509043 ATP10AO60312 1499 aa13□□□□□ -0.33
HTT-205ENST00000509043 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
HTT-205ENST00000509043 FANCAO15360 1455 aa12.99□□□□□ -0.33
HTT-205ENST00000509043 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
HTT-205ENST00000509043 SPAG9O60271 1321 aaKnown RBP12.98□□□□□ -0.33
HTT-205ENST00000509043 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
HTT-205ENST00000509043 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
HTT-205ENST00000509043 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
HTT-205ENST00000509043 TRAPPC8Q9Y2L5 1435 aa12.97□□□□□ -0.33
HTT-205ENST00000509043 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
HTT-205ENST00000509043 INO80Q9ULG1 1556 aaPredicted RBP12.96□□□□□ -0.33
HTT-205ENST00000509043 ANP32CO43423 234 aa12.96□□□□□ -0.33
HTT-205ENST00000509043 SPATA31E1Q6ZUB1 1445 aa12.96□□□□□ -0.34
HTT-205ENST00000509043 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
HTT-205ENST00000509043 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
HTT-205ENST00000509043 RALGAPBQ86X10 1494 aa12.95□□□□□ -0.34
HTT-205ENST00000509043 CCDC144AA2RUR9 1427 aa12.95□□□□□ -0.34
HTT-205ENST00000509043 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
HTT-205ENST00000509043 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
HTT-205ENST00000509043 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms