RNA–Protein interactions for RNA: ENST00000508783.5

RPS3A-207, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-207ENST00000508783 FER1L4A9Z1Z3 1794 aa21.98■■□□□ 1.11
RPS3A-207ENST00000508783 PREX1Q8TCU6 1659 aa21.96■■□□□ 1.11
RPS3A-207ENST00000508783 NUP153P49790 1475 aaKnown RBP21.94■■□□□ 1.1
RPS3A-207ENST00000508783 SAMD9Q5K651 1589 aa21.94■■□□□ 1.1
RPS3A-207ENST00000508783 UHRF1BP1Q6BDS2 1440 aa21.93■■□□□ 1.1
RPS3A-207ENST00000508783 ATP10AO60312 1499 aa21.9■■□□□ 1.1
RPS3A-207ENST00000508783 ARHGEF12Q9NZN5 1544 aa21.89■■□□□ 1.09
RPS3A-207ENST00000508783 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
RPS3A-207ENST00000508783 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
RPS3A-207ENST00000508783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.88■■□□□ 1.092e-8■□□□□ 10.7
RPS3A-207ENST00000508783 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
RPS3A-207ENST00000508783 CEBPAP49715 358 aaPredicted RBP21.86■■□□□ 1.09
RPS3A-207ENST00000508783 PTPRTO14522 1441 aa21.86■■□□□ 1.09
RPS3A-207ENST00000508783 SIGLEC1Q9BZZ2 1709 aa21.83■■□□□ 1.09
RPS3A-207ENST00000508783 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
RPS3A-207ENST00000508783 IQSEC2Q5JU85 1478 aa21.83■■□□□ 1.08
RPS3A-207ENST00000508783 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
RPS3A-207ENST00000508783 EFCAB2Q5VUJ9 269 aa21.81■■□□□ 1.08
RPS3A-207ENST00000508783 MYT1LQ9UL68 1186 aa21.81■■□□□ 1.08
RPS3A-207ENST00000508783 STRCQ7RTU9 1775 aa21.81■■□□□ 1.08
RPS3A-207ENST00000508783 PLCH2O75038 1416 aa21.8■■□□□ 1.08
RPS3A-207ENST00000508783 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
RPS3A-207ENST00000508783 SETD1BQ9UPS6 1966 aaKnown RBP21.78■■□□□ 1.08
RPS3A-207ENST00000508783 ZNF518AQ6AHZ1 1483 aa21.74■■□□□ 1.07
RPS3A-207ENST00000508783 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
RPS3A-207ENST00000508783 TRAPPC8Q9Y2L5 1435 aa21.7■■□□□ 1.06
RPS3A-207ENST00000508783 LTBP4Q8N2S1 1624 aa21.69■■□□□ 1.06
RPS3A-207ENST00000508783 UBAP1LF5GYI3 381 aa21.67■■□□□ 1.06
RPS3A-207ENST00000508783 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
RPS3A-207ENST00000508783 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
RPS3A-207ENST00000508783 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
RPS3A-207ENST00000508783 NCOA1Q15788 1441 aa21.64■■□□□ 1.06
RPS3A-207ENST00000508783 AFAP1Q8N556 730 aa21.64■■□□□ 1.05
RPS3A-207ENST00000508783 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
RPS3A-207ENST00000508783 REREQ9P2R6 1566 aa21.63■■□□□ 1.05
RPS3A-207ENST00000508783 KDM5CP41229 1560 aa21.61■■□□□ 1.05
RPS3A-207ENST00000508783 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
RPS3A-207ENST00000508783 C3P01024 1663 aa21.61■■□□□ 1.05
RPS3A-207ENST00000508783 EEA1Q15075 1411 aa21.61■■□□□ 1.05
RPS3A-207ENST00000508783 AGLP35573 1532 aa21.6■■□□□ 1.05
RPS3A-207ENST00000508783 DIP2CQ9Y2E4 1556 aa21.58■■□□□ 1.05
RPS3A-207ENST00000508783 CLIP1P30622 1438 aa21.58■■□□□ 1.05
RPS3A-207ENST00000508783 KIF14Q15058 1648 aa21.57■■□□□ 1.04
RPS3A-207ENST00000508783 MLH3Q9UHC1 1453 aa21.57■■□□□ 1.04
RPS3A-207ENST00000508783 NPATQ14207 1427 aa21.55■■□□□ 1.04
RPS3A-207ENST00000508783 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
RPS3A-207ENST00000508783 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
RPS3A-207ENST00000508783 PKD2Q13563 968 aa21.54■■□□□ 1.04
RPS3A-207ENST00000508783 ZNF335Q9H4Z2 1342 aaPredicted RBP21.53■■□□□ 1.04
RPS3A-207ENST00000508783 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
RPS3A-207ENST00000508783 ABCA6Q8N139 1617 aa21.5■■□□□ 1.03
RPS3A-207ENST00000508783 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
RPS3A-207ENST00000508783 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
RPS3A-207ENST00000508783 PLA2R1Q13018 1463 aa21.46■■□□□ 1.03
RPS3A-207ENST00000508783 TOM1O60784 492 aa21.46■■□□□ 1.03
RPS3A-207ENST00000508783 ZMYM3Q14202 1370 aa21.46■■□□□ 1.03
RPS3A-207ENST00000508783 PPP6R1Q9UPN7 881 aa21.45■■□□□ 1.02
RPS3A-207ENST00000508783 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
RPS3A-207ENST00000508783 MED1Q15648 1581 aaPredicted RBP21.41■■□□□ 1.02
RPS3A-207ENST00000508783 PIP4K2BP78356 416 aa21.41■■□□□ 1.02
RPS3A-207ENST00000508783 ABCC1P33527 1531 aa21.4■■□□□ 1.02
RPS3A-207ENST00000508783 HSPA1LP34931 641 aa21.4■■□□□ 1.02
RPS3A-207ENST00000508783 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
RPS3A-207ENST00000508783 TCOF1Q13428 1488 aaKnown RBP21.37■■□□□ 1.01
RPS3A-207ENST00000508783 PREX2Q70Z35 1606 aa21.36■■□□□ 1.01
RPS3A-207ENST00000508783 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
RPS3A-207ENST00000508783 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
RPS3A-207ENST00000508783 ZNF142P52746 1687 aaPredicted RBP21.35■■□□□ 1.01
RPS3A-207ENST00000508783 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
RPS3A-207ENST00000508783 KIDINS220Q9ULH0 1771 aa21.35■■□□□ 1.01
RPS3A-207ENST00000508783 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
RPS3A-207ENST00000508783 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
RPS3A-207ENST00000508783 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1.01
RPS3A-207ENST00000508783 CPS1P31327 1500 aa21.33■■□□□ 1
RPS3A-207ENST00000508783 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
RPS3A-207ENST00000508783 PTPRKQ15262 1439 aa21.29■■□□□ 1
RPS3A-207ENST00000508783 ARHGAP35Q9NRY4 1499 aa21.29■■□□□ 1
RPS3A-207ENST00000508783 GGT6Q6P531 493 aa21.29■■□□□ 1
RPS3A-207ENST00000508783 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
RPS3A-207ENST00000508783 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
RPS3A-207ENST00000508783 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
RPS3A-207ENST00000508783 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
RPS3A-207ENST00000508783 SHANK2Q9UPX8 1470 aa21.25■□□□□ 0.99
RPS3A-207ENST00000508783 A2MP01023 1474 aa21.24■□□□□ 0.99
RPS3A-207ENST00000508783 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
RPS3A-207ENST00000508783 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
RPS3A-207ENST00000508783 ATP7AQ04656 1500 aa21.22■□□□□ 0.99
RPS3A-207ENST00000508783 HNRNPMP52272 730 aaKnown RBP eCLIP21.21■□□□□ 0.993e-8■■■□□ 16.8
RPS3A-207ENST00000508783 SYCP2Q9BX26 1530 aa21.2■□□□□ 0.98
RPS3A-207ENST00000508783 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.98
RPS3A-207ENST00000508783 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
RPS3A-207ENST00000508783 KIAA1107Q9UPP5 1409 aa21.18■□□□□ 0.98
RPS3A-207ENST00000508783 DNMT1P26358 1616 aaKnown RBP21.18■□□□□ 0.98
RPS3A-207ENST00000508783 CDC42BPAQ5VT25 1732 aa21.18■□□□□ 0.98
RPS3A-207ENST00000508783 CASKIN1Q8WXD9 1431 aa21.16■□□□□ 0.98
RPS3A-207ENST00000508783 THEMISQ8N1K5 641 aaPredicted RBP21.16■□□□□ 0.98
RPS3A-207ENST00000508783 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
RPS3A-207ENST00000508783 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
RPS3A-207ENST00000508783 TNRQ92752 1358 aa21.15■□□□□ 0.98
RPS3A-207ENST00000508783 ADRA2BP18089 450 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms