RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 C3P01024 1663 aa15.69■□□□□ 0.1
UBE2D3-223ENST00000508249 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-223ENST00000508249 KDM5CP41229 1560 aa15.68■□□□□ 0.1
UBE2D3-223ENST00000508249 MYO5CQ9NQX4 1742 aa15.68■□□□□ 0.1
UBE2D3-223ENST00000508249 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
UBE2D3-223ENST00000508249 DIP2CQ9Y2E4 1556 aa15.66■□□□□ 0.1
UBE2D3-223ENST00000508249 ATP10AO60312 1499 aa15.65■□□□□ 0.1
UBE2D3-223ENST00000508249 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
UBE2D3-223ENST00000508249 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-223ENST00000508249 PLCH2O75038 1416 aa15.64■□□□□ 0.09
UBE2D3-223ENST00000508249 MLECQ14165 292 aa15.64■□□□□ 0.09
UBE2D3-223ENST00000508249 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
UBE2D3-223ENST00000508249 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
UBE2D3-223ENST00000508249 KIF14Q15058 1648 aa15.63■□□□□ 0.09
UBE2D3-223ENST00000508249 PTPRTO14522 1441 aa15.62■□□□□ 0.09
UBE2D3-223ENST00000508249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
UBE2D3-223ENST00000508249 CEBPAP49715 358 aaPredicted RBP15.62■□□□□ 0.09
UBE2D3-223ENST00000508249 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
UBE2D3-223ENST00000508249 UHRF1BP1Q6BDS2 1440 aa15.61■□□□□ 0.09
UBE2D3-223ENST00000508249 IQSEC2Q5JU85 1478 aa15.61■□□□□ 0.09
UBE2D3-223ENST00000508249 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
UBE2D3-223ENST00000508249 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
UBE2D3-223ENST00000508249 ZNF518AQ6AHZ1 1483 aa15.57■□□□□ 0.08
UBE2D3-223ENST00000508249 CDC42BPBQ9Y5S2 1711 aa15.57■□□□□ 0.08
UBE2D3-223ENST00000508249 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
UBE2D3-223ENST00000508249 AGLP35573 1532 aa15.54■□□□□ 0.08
UBE2D3-223ENST00000508249 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
UBE2D3-223ENST00000508249 ITSN2Q9NZM3 1697 aa15.53■□□□□ 0.08
UBE2D3-223ENST00000508249 KIDINS220Q9ULH0 1771 aa15.52■□□□□ 0.08
UBE2D3-223ENST00000508249 MROH2AA6NES4 1674 aa15.52■□□□□ 0.08
UBE2D3-223ENST00000508249 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
UBE2D3-223ENST00000508249 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
UBE2D3-223ENST00000508249 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
UBE2D3-223ENST00000508249 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
UBE2D3-223ENST00000508249 ABCC1P33527 1531 aa15.5■□□□□ 0.07
UBE2D3-223ENST00000508249 MLH3Q9UHC1 1453 aa15.5■□□□□ 0.07
UBE2D3-223ENST00000508249 CAMSAP1Q5T5Y3 1602 aa15.5■□□□□ 0.07
UBE2D3-223ENST00000508249 ARHGAP5Q13017 1502 aa15.48■□□□□ 0.07
UBE2D3-223ENST00000508249 MYO3AQ8NEV4 1616 aa15.47■□□□□ 0.07
UBE2D3-223ENST00000508249 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
UBE2D3-223ENST00000508249 TRAPPC8Q9Y2L5 1435 aa15.47■□□□□ 0.07
UBE2D3-223ENST00000508249 AFAP1Q8N556 730 aa15.46■□□□□ 0.07
UBE2D3-223ENST00000508249 TROQ12816 1431 aaPredicted RBP15.44■□□□□ 0.06
UBE2D3-223ENST00000508249 CDC42BPAQ5VT25 1732 aa15.44■□□□□ 0.06
UBE2D3-223ENST00000508249 MED1Q15648 1581 aaPredicted RBP15.44■□□□□ 0.06
UBE2D3-223ENST00000508249 EEA1Q15075 1411 aa15.43■□□□□ 0.06
UBE2D3-223ENST00000508249 EFCAB2Q5VUJ9 269 aa15.43■□□□□ 0.06
UBE2D3-223ENST00000508249 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
UBE2D3-223ENST00000508249 ARHGAP35Q9NRY4 1499 aa15.42■□□□□ 0.06
UBE2D3-223ENST00000508249 NPATQ14207 1427 aa15.42■□□□□ 0.06
UBE2D3-223ENST00000508249 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
UBE2D3-223ENST00000508249 CLTCQ00610 1675 aaKnown RBP15.41■□□□□ 0.06
UBE2D3-223ENST00000508249 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
UBE2D3-223ENST00000508249 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
UBE2D3-223ENST00000508249 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
UBE2D3-223ENST00000508249 CEP170BQ9Y4F5 1589 aaPredicted RBP15.4■□□□□ 0.06
UBE2D3-223ENST00000508249 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
UBE2D3-223ENST00000508249 PLA2R1Q13018 1463 aa15.4■□□□□ 0.06
UBE2D3-223ENST00000508249 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
UBE2D3-223ENST00000508249 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
UBE2D3-223ENST00000508249 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
UBE2D3-223ENST00000508249 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-223ENST00000508249 NEURL4Q96JN8 1562 aa15.35■□□□□ 0.05
UBE2D3-223ENST00000508249 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.04
UBE2D3-223ENST00000508249 CLIP1P30622 1438 aa15.33■□□□□ 0.04
UBE2D3-223ENST00000508249 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
UBE2D3-223ENST00000508249 SYCP2Q9BX26 1530 aa15.33■□□□□ 0.04
UBE2D3-223ENST00000508249 DNMT1P26358 1616 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-223ENST00000508249 UBAP1LF5GYI3 381 aa15.31■□□□□ 0.04
UBE2D3-223ENST00000508249 ZMYM3Q14202 1370 aa15.31■□□□□ 0.04
UBE2D3-223ENST00000508249 ATP7AQ04656 1500 aa15.3■□□□□ 0.04
UBE2D3-223ENST00000508249 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
UBE2D3-223ENST00000508249 HSPA1LP34931 641 aa15.25■□□□□ 0.03
UBE2D3-223ENST00000508249 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
UBE2D3-223ENST00000508249 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-223ENST00000508249 CPS1P31327 1500 aa15.25■□□□□ 0.03
UBE2D3-223ENST00000508249 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
UBE2D3-223ENST00000508249 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
UBE2D3-223ENST00000508249 PKD2Q13563 968 aa15.24■□□□□ 0.03
UBE2D3-223ENST00000508249 A2ML1A8K2U0 1454 aa15.24■□□□□ 0.03
UBE2D3-223ENST00000508249 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
UBE2D3-223ENST00000508249 ESF1Q9H501 851 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-223ENST00000508249 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
UBE2D3-223ENST00000508249 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-223ENST00000508249 A2MP01023 1474 aa15.22■□□□□ 0.03
UBE2D3-223ENST00000508249 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-223ENST00000508249 CASKIN1Q8WXD9 1431 aa15.22■□□□□ 0.03
UBE2D3-223ENST00000508249 SHANK2Q9UPX8 1470 aa15.2■□□□□ 0.02
UBE2D3-223ENST00000508249 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
UBE2D3-223ENST00000508249 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
UBE2D3-223ENST00000508249 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
UBE2D3-223ENST00000508249 FYCO1Q9BQS8 1478 aa15.16■□□□□ 0.02
UBE2D3-223ENST00000508249 SPAG9O60271 1321 aaKnown RBP15.16■□□□□ 0.02
UBE2D3-223ENST00000508249 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
UBE2D3-223ENST00000508249 IQGAP1P46940 1657 aa15.14■□□□□ 0.01
UBE2D3-223ENST00000508249 SYNMO15061 1565 aa15.14■□□□□ 0.01
UBE2D3-223ENST00000508249 MED14O60244 1454 aa15.14■□□□□ 0.01
UBE2D3-223ENST00000508249 ZC3H13Q5T200 1668 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-223ENST00000508249 XIRP1Q702N8 1843 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-223ENST00000508249 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms