RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
ATXN3-210ENST00000507965 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
ATXN3-210ENST00000507965 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
ATXN3-210ENST00000507965 DPY19L2Q6NUT2 758 aa10.93□□□□□ -0.66
ATXN3-210ENST00000507965 ILDR1Q86SU0 546 aaPredicted RBP10.93□□□□□ -0.66
ATXN3-210ENST00000507965 FAM205CA6NFA0 338 aa10.91□□□□□ -0.66
ATXN3-210ENST00000507965 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
ATXN3-210ENST00000507965 LAMC3Q9Y6N6 1575 aa10.9□□□□□ -0.66
ATXN3-210ENST00000507965 HS3ST6Q96QI5 342 aa10.9□□□□□ -0.66
ATXN3-210ENST00000507965 WIZO95785 1651 aa10.86□□□□□ -0.67
ATXN3-210ENST00000507965 POTEB3A0JP26 581 aa10.84□□□□□ -0.67
ATXN3-210ENST00000507965 POTEBQ6S5H4 581 aa10.84□□□□□ -0.67
ATXN3-210ENST00000507965 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
ATXN3-210ENST00000507965 TRIM41Q8WV44 630 aa10.82□□□□□ -0.68
ATXN3-210ENST00000507965 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
ATXN3-210ENST00000507965 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
ATXN3-210ENST00000507965 HOXB3P14651 431 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-210ENST00000507965 EFCAB3Q8N7B9 438 aa10.8□□□□□ -0.68
ATXN3-210ENST00000507965 DOK7Q18PE1 504 aa10.79□□□□□ -0.68
ATXN3-210ENST00000507965 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
ATXN3-210ENST00000507965 ERBB3P21860 1342 aa10.76□□□□□ -0.69
ATXN3-210ENST00000507965 RIMBP2O15034 1052 aa10.75□□□□□ -0.69
ATXN3-210ENST00000507965 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
ATXN3-210ENST00000507965 WDR62O43379 1518 aa10.74□□□□□ -0.69
ATXN3-210ENST00000507965 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
ATXN3-210ENST00000507965 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
ATXN3-210ENST00000507965 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
ATXN3-210ENST00000507965 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
ATXN3-210ENST00000507965 SOX12O15370 315 aa10.69□□□□□ -0.7
ATXN3-210ENST00000507965 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
ATXN3-210ENST00000507965 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
ATXN3-210ENST00000507965 TOP2AP11388 1531 aaKnown RBP10.67□□□□□ -0.7
ATXN3-210ENST00000507965 VARS2Q5ST30 1063 aaKnown RBP10.66□□□□□ -0.7
ATXN3-210ENST00000507965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-210ENST00000507965 VGFO15240 615 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-210ENST00000507965 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-210ENST00000507965 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
ATXN3-210ENST00000507965 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
ATXN3-210ENST00000507965 TMEM92Q6UXU6 159 aa10.64□□□□□ -0.71
ATXN3-210ENST00000507965 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
ATXN3-210ENST00000507965 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-210ENST00000507965 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-210ENST00000507965 CFTRP13569 1480 aa10.61□□□□□ -0.71
ATXN3-210ENST00000507965 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
ATXN3-210ENST00000507965 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
ATXN3-210ENST00000507965 RNF166Q96A37 237 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-210ENST00000507965 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
ATXN3-210ENST00000507965 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
ATXN3-210ENST00000507965 NLRP6P59044 892 aa10.55□□□□□ -0.72
ATXN3-210ENST00000507965 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
ATXN3-210ENST00000507965 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
ATXN3-210ENST00000507965 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
ATXN3-210ENST00000507965 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-210ENST00000507965 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
ATXN3-210ENST00000507965 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
ATXN3-210ENST00000507965 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
ATXN3-210ENST00000507965 PTGER2P43116 358 aa10.49□□□□□ -0.73
ATXN3-210ENST00000507965 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-210ENST00000507965 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
ATXN3-210ENST00000507965 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
ATXN3-210ENST00000507965 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
ATXN3-210ENST00000507965 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
ATXN3-210ENST00000507965 CHD1O14646 1710 aa10.47□□□□□ -0.73
ATXN3-210ENST00000507965 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-210ENST00000507965 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
ATXN3-210ENST00000507965 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
ATXN3-210ENST00000507965 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
ATXN3-210ENST00000507965 DNMBPQ6XZF7 1577 aa10.44□□□□□ -0.74
ATXN3-210ENST00000507965 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
ATXN3-210ENST00000507965 STK25O00506 426 aa10.43□□□□□ -0.74
ATXN3-210ENST00000507965 MFRPQ9BY79 579 aa10.43□□□□□ -0.74
ATXN3-210ENST00000507965 TARBP1Q13395 1621 aaKnown RBP10.43□□□□□ -0.74
ATXN3-210ENST00000507965 C2orf72A6NCS6 295 aa10.4□□□□□ -0.74
ATXN3-210ENST00000507965 ARHGEF11O15085 1522 aa10.39□□□□□ -0.75
ATXN3-210ENST00000507965 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-210ENST00000507965 NUDT7P0C024 238 aa10.39□□□□□ -0.75
ATXN3-210ENST00000507965 LSM11P83369 360 aaKnown RBP eCLIP10.39□□□□□ -0.75
ATXN3-210ENST00000507965 KIF3CO14782 793 aa10.38□□□□□ -0.75
ATXN3-210ENST00000507965 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-210ENST00000507965 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
ATXN3-210ENST00000507965 PBX2P40425 430 aa10.35□□□□□ -0.75
ATXN3-210ENST00000507965 TMC2Q8TDI7 906 aa10.35□□□□□ -0.75
ATXN3-210ENST00000507965 WDR97A6NE52 1622 aa10.34□□□□□ -0.75
ATXN3-210ENST00000507965 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
ATXN3-210ENST00000507965 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
ATXN3-210ENST00000507965 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
ATXN3-210ENST00000507965 SLC34A2O95436 690 aa10.32□□□□□ -0.76
ATXN3-210ENST00000507965 AXIN2Q9Y2T1 843 aa10.31□□□□□ -0.76
ATXN3-210ENST00000507965 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
ATXN3-210ENST00000507965 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
ATXN3-210ENST00000507965 FGD5Q6ZNL6 1462 aa10.29□□□□□ -0.76
ATXN3-210ENST00000507965 ARAP1Q96P48 1450 aa10.29□□□□□ -0.76
ATXN3-210ENST00000507965 CUX1P39880 1505 aa10.28□□□□□ -0.76
ATXN3-210ENST00000507965 RGL2O15211 777 aa10.27□□□□□ -0.77
ATXN3-210ENST00000507965 POTEEQ6S8J3 1075 aa10.27□□□□□ -0.77
ATXN3-210ENST00000507965 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
ATXN3-210ENST00000507965 CLASP1Q7Z460 1538 aa10.27□□□□□ -0.77
ATXN3-210ENST00000507965 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-210ENST00000507965 TDRD9Q8NDG6 1382 aaKnown RBP10.24□□□□□ -0.77
ATXN3-210ENST00000507965 ARHGAP33O14559 1287 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms