RNA–Protein interactions for RNA: ENST00000507611.1

PRDM5-209, Transcript of PR/SET domain 5, humanhuman

TSL 2

Gene PRDM5, Length 535 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-209ENST00000507611 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
PRDM5-209ENST00000507611 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
PRDM5-209ENST00000507611 CEBPAP49715 358 aaPredicted RBP14.39□□□□□ -0.11
PRDM5-209ENST00000507611 PTPRTO14522 1441 aa14.39□□□□□ -0.11
PRDM5-209ENST00000507611 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
PRDM5-209ENST00000507611 ZFYVE16Q7Z3T8 1539 aa14.37□□□□□ -0.11
PRDM5-209ENST00000507611 ATP10BO94823 1461 aa14.37□□□□□ -0.11
PRDM5-209ENST00000507611 RAPGEF2Q9Y4G8 1499 aa14.37□□□□□ -0.11
PRDM5-209ENST00000507611 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
PRDM5-209ENST00000507611 UHRF1BP1Q6BDS2 1440 aa14.36□□□□□ -0.11
PRDM5-209ENST00000507611 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
PRDM5-209ENST00000507611 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
PRDM5-209ENST00000507611 EFCAB5A4FU69 1503 aa14.35□□□□□ -0.11
PRDM5-209ENST00000507611 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
PRDM5-209ENST00000507611 ZMYM4Q5VZL5 1548 aa14.34□□□□□ -0.11
PRDM5-209ENST00000507611 SETD1BQ9UPS6 1966 aaKnown RBP14.34□□□□□ -0.11
PRDM5-209ENST00000507611 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.11
PRDM5-209ENST00000507611 ARHGEF12Q9NZN5 1544 aa14.33□□□□□ -0.12
PRDM5-209ENST00000507611 HECW1Q76N89 1606 aa14.29□□□□□ -0.12
PRDM5-209ENST00000507611 CFAP74Q9C0B2 1584 aa14.28□□□□□ -0.12
PRDM5-209ENST00000507611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
PRDM5-209ENST00000507611 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
PRDM5-209ENST00000507611 MAGI2Q86UL8 1455 aa14.26□□□□□ -0.13
PRDM5-209ENST00000507611 HSPA1LP34931 641 aa14.26□□□□□ -0.13
PRDM5-209ENST00000507611 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
PRDM5-209ENST00000507611 C3P01024 1663 aa14.23□□□□□ -0.13
PRDM5-209ENST00000507611 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
PRDM5-209ENST00000507611 P3H3Q8IVL6 736 aa14.23□□□□□ -0.13
PRDM5-209ENST00000507611 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
PRDM5-209ENST00000507611 ATP10AO60312 1499 aa14.22□□□□□ -0.13
PRDM5-209ENST00000507611 C9orf84Q5VXU9 1444 aa14.22□□□□□ -0.13
PRDM5-209ENST00000507611 FAM9AQ8IZU1 332 aaPredicted RBP14.21□□□□□ -0.13
PRDM5-209ENST00000507611 RAPGEF6Q8TEU7 1601 aa14.21□□□□□ -0.13
PRDM5-209ENST00000507611 PIP4K2BP78356 416 aa14.19□□□□□ -0.14
PRDM5-209ENST00000507611 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
PRDM5-209ENST00000507611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRDM5-209ENST00000507611 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
PRDM5-209ENST00000507611 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
PRDM5-209ENST00000507611 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
PRDM5-209ENST00000507611 TRAPPC8Q9Y2L5 1435 aa14.14□□□□□ -0.15
PRDM5-209ENST00000507611 NUP153P49790 1475 aaKnown RBP14.12□□□□□ -0.15
PRDM5-209ENST00000507611 PLEKHD1A6NEE1 506 aa14.1□□□□□ -0.15
PRDM5-209ENST00000507611 SUPT6HQ7KZ85 1726 aaKnown RBP14.1□□□□□ -0.15
PRDM5-209ENST00000507611 ESF1Q9H501 851 aaKnown RBP14.09□□□□□ -0.15
PRDM5-209ENST00000507611 TOM1O60784 492 aa14.08□□□□□ -0.16
PRDM5-209ENST00000507611 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
PRDM5-209ENST00000507611 DIP2CQ9Y2E4 1556 aa14.06□□□□□ -0.16
PRDM5-209ENST00000507611 MYT1LQ9UL68 1186 aa14.05□□□□□ -0.16
PRDM5-209ENST00000507611 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
PRDM5-209ENST00000507611 PLCH2O75038 1416 aa14.03□□□□□ -0.16
PRDM5-209ENST00000507611 REREQ9P2R6 1566 aa14.03□□□□□ -0.16
PRDM5-209ENST00000507611 ABCA6Q8N139 1617 aa14.03□□□□□ -0.16
PRDM5-209ENST00000507611 PKD2Q13563 968 aa14.02□□□□□ -0.17
PRDM5-209ENST00000507611 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
PRDM5-209ENST00000507611 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
PRDM5-209ENST00000507611 KDM5CP41229 1560 aa14.01□□□□□ -0.17
PRDM5-209ENST00000507611 AGLP35573 1532 aa14.01□□□□□ -0.17
PRDM5-209ENST00000507611 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
PRDM5-209ENST00000507611 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
PRDM5-209ENST00000507611 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
PRDM5-209ENST00000507611 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
PRDM5-209ENST00000507611 AFAP1Q8N556 730 aa14□□□□□ -0.17
PRDM5-209ENST00000507611 ALKQ9UM73 1620 aa14□□□□□ -0.17
PRDM5-209ENST00000507611 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
PRDM5-209ENST00000507611 NPATQ14207 1427 aa13.99□□□□□ -0.17
PRDM5-209ENST00000507611 CNTLNQ9NXG0 1405 aa13.99□□□□□ -0.17
PRDM5-209ENST00000507611 SETD1AO15047 1707 aaKnown RBP13.99□□□□□ -0.17
PRDM5-209ENST00000507611 CPS1P31327 1500 aa13.99□□□□□ -0.17
PRDM5-209ENST00000507611 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
PRDM5-209ENST00000507611 CEP170BQ9Y4F5 1589 aaPredicted RBP13.98□□□□□ -0.17
PRDM5-209ENST00000507611 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
PRDM5-209ENST00000507611 PTPRKQ15262 1439 aa13.96□□□□□ -0.18
PRDM5-209ENST00000507611 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
PRDM5-209ENST00000507611 SHANK2Q9UPX8 1470 aa13.94□□□□□ -0.18
PRDM5-209ENST00000507611 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
PRDM5-209ENST00000507611 POTEAQ6S8J7 498 aa13.94□□□□□ -0.18
PRDM5-209ENST00000507611 POLR1AO95602 1720 aaPredicted RBP13.93□□□□□ -0.18
PRDM5-209ENST00000507611 ZMYM3Q14202 1370 aa13.93□□□□□ -0.18
PRDM5-209ENST00000507611 CLTCQ00610 1675 aaKnown RBP13.92□□□□□ -0.18
PRDM5-209ENST00000507611 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
PRDM5-209ENST00000507611 MLH3Q9UHC1 1453 aa13.91□□□□□ -0.18
PRDM5-209ENST00000507611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
PRDM5-209ENST00000507611 NEURL4Q96JN8 1562 aa13.89□□□□□ -0.19
PRDM5-209ENST00000507611 KIF14Q15058 1648 aa13.89□□□□□ -0.19
PRDM5-209ENST00000507611 KIDINS220Q9ULH0 1771 aa13.88□□□□□ -0.19
PRDM5-209ENST00000507611 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
PRDM5-209ENST00000507611 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
PRDM5-209ENST00000507611 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
PRDM5-209ENST00000507611 RNF17Q9BXT8 1623 aaKnown RBP13.84□□□□□ -0.19
PRDM5-209ENST00000507611 A2ML1A8K2U0 1454 aa13.84□□□□□ -0.19
PRDM5-209ENST00000507611 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
PRDM5-209ENST00000507611 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
PRDM5-209ENST00000507611 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
PRDM5-209ENST00000507611 ABCC1P33527 1531 aa13.81□□□□□ -0.2
PRDM5-209ENST00000507611 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
PRDM5-209ENST00000507611 UPF1Q92900 1129 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRDM5-209ENST00000507611 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
PRDM5-209ENST00000507611 SYNMO15061 1565 aa13.77□□□□□ -0.21
PRDM5-209ENST00000507611 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
PRDM5-209ENST00000507611 NPHP4O75161 1426 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms