RNA–Protein interactions for RNA: ENST00000507352.1

FAM13A-210, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 1 (best)

Gene FAM13A, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-210ENST00000507352 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
FAM13A-210ENST00000507352 LTBP4Q8N2S1 1624 aa17.4■□□□□ 0.38
FAM13A-210ENST00000507352 PTPRTO14522 1441 aa17.38■□□□□ 0.37
FAM13A-210ENST00000507352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
FAM13A-210ENST00000507352 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
FAM13A-210ENST00000507352 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
FAM13A-210ENST00000507352 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
FAM13A-210ENST00000507352 NUP153P49790 1475 aaKnown RBP17.35■□□□□ 0.37
FAM13A-210ENST00000507352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
FAM13A-210ENST00000507352 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
FAM13A-210ENST00000507352 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
FAM13A-210ENST00000507352 MED1Q15648 1581 aaPredicted RBP17.29■□□□□ 0.36
FAM13A-210ENST00000507352 ATP10AO60312 1499 aa17.29■□□□□ 0.36
FAM13A-210ENST00000507352 PRXQ9BXM0 1461 aa17.29■□□□□ 0.36
FAM13A-210ENST00000507352 C3P01024 1663 aa17.28■□□□□ 0.36
FAM13A-210ENST00000507352 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
FAM13A-210ENST00000507352 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
FAM13A-210ENST00000507352 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
FAM13A-210ENST00000507352 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
FAM13A-210ENST00000507352 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
FAM13A-210ENST00000507352 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
FAM13A-210ENST00000507352 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
FAM13A-210ENST00000507352 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
FAM13A-210ENST00000507352 KDM5CP41229 1560 aa17.18■□□□□ 0.34
FAM13A-210ENST00000507352 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
FAM13A-210ENST00000507352 REREQ9P2R6 1566 aa17.18■□□□□ 0.34
FAM13A-210ENST00000507352 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
FAM13A-210ENST00000507352 PLCH2O75038 1416 aa17.16■□□□□ 0.34
FAM13A-210ENST00000507352 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
FAM13A-210ENST00000507352 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
FAM13A-210ENST00000507352 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
FAM13A-210ENST00000507352 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
FAM13A-210ENST00000507352 AGLP35573 1532 aa17.1■□□□□ 0.33
FAM13A-210ENST00000507352 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
FAM13A-210ENST00000507352 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
FAM13A-210ENST00000507352 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
FAM13A-210ENST00000507352 SUPT6HQ7KZ85 1726 aaKnown RBP17.08■□□□□ 0.33
FAM13A-210ENST00000507352 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.33
FAM13A-210ENST00000507352 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.33
FAM13A-210ENST00000507352 MROH2AA6NES4 1674 aa17.07■□□□□ 0.32
FAM13A-210ENST00000507352 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
FAM13A-210ENST00000507352 HSPA1LP34931 641 aa17.07■□□□□ 0.32
FAM13A-210ENST00000507352 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
FAM13A-210ENST00000507352 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
FAM13A-210ENST00000507352 NPATQ14207 1427 aa17.06■□□□□ 0.32
FAM13A-210ENST00000507352 KIF14Q15058 1648 aa17.06■□□□□ 0.32
FAM13A-210ENST00000507352 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
FAM13A-210ENST00000507352 NCKAP5LQ9HCH0 1330 aa17.04■□□□□ 0.32
FAM13A-210ENST00000507352 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
FAM13A-210ENST00000507352 CEP170BQ9Y4F5 1589 aaPredicted RBP17.03■□□□□ 0.32
FAM13A-210ENST00000507352 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.31
FAM13A-210ENST00000507352 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
FAM13A-210ENST00000507352 MLH3Q9UHC1 1453 aa17.01■□□□□ 0.31
FAM13A-210ENST00000507352 AFAP1Q8N556 730 aa17■□□□□ 0.31
FAM13A-210ENST00000507352 ITSN2Q9NZM3 1697 aa16.99■□□□□ 0.31
FAM13A-210ENST00000507352 ABCC1P33527 1531 aa16.98■□□□□ 0.31
FAM13A-210ENST00000507352 CPS1P31327 1500 aa16.98■□□□□ 0.31
FAM13A-210ENST00000507352 PKD2Q13563 968 aa16.97■□□□□ 0.31
FAM13A-210ENST00000507352 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
FAM13A-210ENST00000507352 KIDINS220Q9ULH0 1771 aa16.96■□□□□ 0.3
FAM13A-210ENST00000507352 CLTCQ00610 1675 aaKnown RBP16.95■□□□□ 0.3
FAM13A-210ENST00000507352 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
FAM13A-210ENST00000507352 TOM1O60784 492 aa16.94■□□□□ 0.3
FAM13A-210ENST00000507352 PREX2Q70Z35 1606 aa16.93■□□□□ 0.3
FAM13A-210ENST00000507352 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
FAM13A-210ENST00000507352 CLIP1P30622 1438 aa16.91■□□□□ 0.3
FAM13A-210ENST00000507352 ZMYM3Q14202 1370 aa16.91■□□□□ 0.3
FAM13A-210ENST00000507352 TROQ12816 1431 aaPredicted RBP16.9■□□□□ 0.3
FAM13A-210ENST00000507352 ALKQ9UM73 1620 aa16.89■□□□□ 0.29
FAM13A-210ENST00000507352 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
FAM13A-210ENST00000507352 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
FAM13A-210ENST00000507352 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
FAM13A-210ENST00000507352 DNMT1P26358 1616 aaKnown RBP16.86■□□□□ 0.29
FAM13A-210ENST00000507352 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
FAM13A-210ENST00000507352 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
FAM13A-210ENST00000507352 A2ML1A8K2U0 1454 aa16.85■□□□□ 0.29
FAM13A-210ENST00000507352 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
FAM13A-210ENST00000507352 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
FAM13A-210ENST00000507352 RNF17Q9BXT8 1623 aaKnown RBP16.84■□□□□ 0.29
FAM13A-210ENST00000507352 ATP1B4Q9UN42 357 aaPredicted RBP16.84■□□□□ 0.29
FAM13A-210ENST00000507352 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.29
FAM13A-210ENST00000507352 FMN1Q68DA7 1419 aa16.83■□□□□ 0.29
FAM13A-210ENST00000507352 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
FAM13A-210ENST00000507352 ATP7AQ04656 1500 aa16.8■□□□□ 0.28
FAM13A-210ENST00000507352 SYCP2Q9BX26 1530 aa16.8■□□□□ 0.28
FAM13A-210ENST00000507352 SYNMO15061 1565 aa16.79■□□□□ 0.28
FAM13A-210ENST00000507352 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
FAM13A-210ENST00000507352 INO80Q9ULG1 1556 aaPredicted RBP16.79■□□□□ 0.28
FAM13A-210ENST00000507352 SETD1AO15047 1707 aaKnown RBP16.78■□□□□ 0.28
FAM13A-210ENST00000507352 EEA1Q15075 1411 aa16.76■□□□□ 0.27
FAM13A-210ENST00000507352 RGS17Q9UGC6 210 aaPredicted RBP16.75■□□□□ 0.27
FAM13A-210ENST00000507352 A2MP01023 1474 aa16.75■□□□□ 0.27
FAM13A-210ENST00000507352 IQGAP1P46940 1657 aa16.74■□□□□ 0.27
FAM13A-210ENST00000507352 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
FAM13A-210ENST00000507352 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
FAM13A-210ENST00000507352 STRCP1A6NGW2 1772 aa16.71■□□□□ 0.27
FAM13A-210ENST00000507352 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
FAM13A-210ENST00000507352 ADGBQ8N7X0 1667 aa16.71■□□□□ 0.27
FAM13A-210ENST00000507352 TNRQ92752 1358 aa16.7■□□□□ 0.26
FAM13A-210ENST00000507352 NPHP4O75161 1426 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms