RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PCDHB8Q9UN66 801 aa16.05■□□□□ 0.16
CLCN3-205ENST00000506924 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
CLCN3-205ENST00000506924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.04■□□□□ 0.16
CLCN3-205ENST00000506924 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
CLCN3-205ENST00000506924 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
CLCN3-205ENST00000506924 STK25O00506 426 aa16.02■□□□□ 0.16
CLCN3-205ENST00000506924 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.16
CLCN3-205ENST00000506924 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
CLCN3-205ENST00000506924 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
CLCN3-205ENST00000506924 PSEN1P49768 467 aa15.99■□□□□ 0.15
CLCN3-205ENST00000506924 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
CLCN3-205ENST00000506924 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
CLCN3-205ENST00000506924 EVX2Q03828 476 aa15.98■□□□□ 0.15
CLCN3-205ENST00000506924 IGF1RP08069 1367 aa15.98■□□□□ 0.15
CLCN3-205ENST00000506924 MS4A3Q96HJ5 214 aa15.97■□□□□ 0.15
CLCN3-205ENST00000506924 BCL11BQ9C0K0 894 aaPredicted RBP15.97■□□□□ 0.15
CLCN3-205ENST00000506924 GRIN2AQ12879 1464 aa15.96■□□□□ 0.14
CLCN3-205ENST00000506924 PLCB2Q00722 1185 aa15.94■□□□□ 0.14
CLCN3-205ENST00000506924 STK24Q9Y6E0 443 aa15.94■□□□□ 0.14
CLCN3-205ENST00000506924 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
CLCN3-205ENST00000506924 TIE1P35590 1138 aa15.9■□□□□ 0.14
CLCN3-205ENST00000506924 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
CLCN3-205ENST00000506924 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
CLCN3-205ENST00000506924 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
CLCN3-205ENST00000506924 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
CLCN3-205ENST00000506924 CUL7Q14999 1698 aa15.89■□□□□ 0.13
CLCN3-205ENST00000506924 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
CLCN3-205ENST00000506924 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
CLCN3-205ENST00000506924 RYDENQ9NUL5 291 aaKnown RBP15.87■□□□□ 0.13
CLCN3-205ENST00000506924 NUP160Q12769 1436 aa15.86■□□□□ 0.13
CLCN3-205ENST00000506924 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
CLCN3-205ENST00000506924 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
CLCN3-205ENST00000506924 SLC24A1O60721 1099 aa15.84■□□□□ 0.13
CLCN3-205ENST00000506924 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
CLCN3-205ENST00000506924 NKX1-1Q15270 411 aaPredicted RBP15.81■□□□□ 0.12
CLCN3-205ENST00000506924 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
CLCN3-205ENST00000506924 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
CLCN3-205ENST00000506924 GABBR2O75899 941 aa15.79■□□□□ 0.12
CLCN3-205ENST00000506924 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
CLCN3-205ENST00000506924 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
CLCN3-205ENST00000506924 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
CLCN3-205ENST00000506924 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
CLCN3-205ENST00000506924 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
CLCN3-205ENST00000506924 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
CLCN3-205ENST00000506924 TTLL13PA6NNM8 815 aa15.76■□□□□ 0.11
CLCN3-205ENST00000506924 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
CLCN3-205ENST00000506924 SOX12O15370 315 aa15.75■□□□□ 0.11
CLCN3-205ENST00000506924 CABP2Q9NPB3 220 aa15.75■□□□□ 0.11
CLCN3-205ENST00000506924 BMP2KQ9NSY1 1161 aaPredicted RBP15.75■□□□□ 0.11
CLCN3-205ENST00000506924 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
CLCN3-205ENST00000506924 GTPBP6O43824 516 aaPredicted RBP15.73■□□□□ 0.11
CLCN3-205ENST00000506924 PRG4Q92954 1404 aaPredicted RBP15.73■□□□□ 0.11
CLCN3-205ENST00000506924 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
CLCN3-205ENST00000506924 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
CLCN3-205ENST00000506924 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
CLCN3-205ENST00000506924 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
CLCN3-205ENST00000506924 EEA1Q15075 1411 aa15.7■□□□□ 0.1
CLCN3-205ENST00000506924 ASTLQ6HA08 431 aaPredicted RBP15.7■□□□□ 0.1
CLCN3-205ENST00000506924 EFCAB3Q8N7B9 438 aa15.7■□□□□ 0.1
CLCN3-205ENST00000506924 TTBK1Q5TCY1 1321 aaPredicted RBP15.67■□□□□ 0.1
CLCN3-205ENST00000506924 IQGAP2Q13576 1575 aa15.66■□□□□ 0.1
CLCN3-205ENST00000506924 NLRP6P59044 892 aa15.66■□□□□ 0.1
CLCN3-205ENST00000506924 MKRN3Q13064 507 aaKnown RBP15.66■□□□□ 0.1
CLCN3-205ENST00000506924 MFRPQ9BY79 579 aa15.66■□□□□ 0.1
CLCN3-205ENST00000506924 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
CLCN3-205ENST00000506924 TRIM35Q9UPQ4 493 aa15.64■□□□□ 0.09
CLCN3-205ENST00000506924 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
CLCN3-205ENST00000506924 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
CLCN3-205ENST00000506924 IER5LQ5T953 404 aa15.61■□□□□ 0.09
CLCN3-205ENST00000506924 FBXO22Q8NEZ5 403 aa15.61■□□□□ 0.09
CLCN3-205ENST00000506924 DCBLD2Q96PD2 775 aa15.61■□□□□ 0.09
CLCN3-205ENST00000506924 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
CLCN3-205ENST00000506924 ATN1P54259 1190 aaPredicted RBP15.6■□□□□ 0.09
CLCN3-205ENST00000506924 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
CLCN3-205ENST00000506924 PHF8Q9UPP1 1060 aa15.57■□□□□ 0.08
CLCN3-205ENST00000506924 CARMIL2Q6F5E8 1435 aa15.57■□□□□ 0.08
CLCN3-205ENST00000506924 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
CLCN3-205ENST00000506924 KIF21BO75037 1637 aa15.57■□□□□ 0.08
CLCN3-205ENST00000506924 UGGT2Q9NYU1 1516 aa15.56■□□□□ 0.08
CLCN3-205ENST00000506924 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
CLCN3-205ENST00000506924 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
CLCN3-205ENST00000506924 PTPRGP23470 1445 aa15.53■□□□□ 0.08
CLCN3-205ENST00000506924 TNIKQ9UKE5 1360 aa15.53■□□□□ 0.08
CLCN3-205ENST00000506924 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
CLCN3-205ENST00000506924 KIAA0556O60303 1618 aa15.52■□□□□ 0.08
CLCN3-205ENST00000506924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCN3-205ENST00000506924 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
CLCN3-205ENST00000506924 MS4A4AQ96JQ5 239 aa15.48■□□□□ 0.07
CLCN3-205ENST00000506924 ADCY10Q96PN6 1610 aa15.47■□□□□ 0.07
CLCN3-205ENST00000506924 IRX5P78411 483 aaPredicted RBP15.47■□□□□ 0.07
CLCN3-205ENST00000506924 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
CLCN3-205ENST00000506924 TSHZ2Q9NRE2 1034 aa15.46■□□□□ 0.07
CLCN3-205ENST00000506924 OCEL1Q9H607 264 aa15.45■□□□□ 0.06
CLCN3-205ENST00000506924 C7P10643 843 aa15.43■□□□□ 0.06
CLCN3-205ENST00000506924 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
CLCN3-205ENST00000506924 UACAQ9BZF9 1416 aa15.42■□□□□ 0.06
CLCN3-205ENST00000506924 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
CLCN3-205ENST00000506924 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
CLCN3-205ENST00000506924 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
CLCN3-205ENST00000506924 PDCD7Q8N8D1 485 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms